RNA–Protein interactions for RNA: ENST00000398527.6

MSL3-207, Transcript of MSL complex subunit 3, humanhuman

TSL 2 BASIC

Gene MSL3, Length 2,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-207ENST00000398527 GADD45BO75293 160 aaPredicted RBP12.17□□□□□ -0.46
MSL3-207ENST00000398527 HARSP12081 509 aaKnown RBP12.17□□□□□ -0.46
MSL3-207ENST00000398527 ZBED6P86452 979 aa12.17□□□□□ -0.46
MSL3-207ENST00000398527 PTPN12Q05209 780 aaKnown RBP12.17□□□□□ -0.46
MSL3-207ENST00000398527 FAM160A1Q05DH4 1040 aa12.17□□□□□ -0.46
MSL3-207ENST00000398527 ST3GAL1Q11201 340 aa12.17□□□□□ -0.46
MSL3-207ENST00000398527 NOM1Q5C9Z4 860 aaKnown RBP12.17□□□□□ -0.46
MSL3-207ENST00000398527 EGFLAMQ63HQ2 1017 aa12.17□□□□□ -0.46
MSL3-207ENST00000398527 BLOC1S2Q6QNY1 142 aa12.17□□□□□ -0.46
MSL3-207ENST00000398527 FUCA2Q9BTY2 467 aa12.17□□□□□ -0.46
MSL3-207ENST00000398527 EXOC1Q9NV70 894 aa12.17□□□□□ -0.46
MSL3-207ENST00000398527 ZNF446Q9NWS9 450 aa12.17□□□□□ -0.46
MSL3-207ENST00000398527 ATP8A1Q9Y2Q0 1164 aa12.17□□□□□ -0.46
MSL3-207ENST00000398527 TJP1Q07157 1748 aa12.16□□□□□ -0.46
MSL3-207ENST00000398527 TAF5LO75529 589 aa12.16□□□□□ -0.46
MSL3-207ENST00000398527 PYGBP11216 843 aa12.16□□□□□ -0.46
MSL3-207ENST00000398527 EIF2B5Q13144 721 aaKnown RBP12.16□□□□□ -0.46
MSL3-207ENST00000398527 TRIM29Q14134 588 aa12.16□□□□□ -0.46
MSL3-207ENST00000398527 ME3Q16798 604 aa12.16□□□□□ -0.46
MSL3-207ENST00000398527 ERFEQ4G0M1 354 aa12.16□□□□□ -0.46
MSL3-207ENST00000398527 TNNI3KQ59H18 835 aa12.16□□□□□ -0.46
MSL3-207ENST00000398527 KRT77Q7Z794 578 aa12.16□□□□□ -0.46
MSL3-207ENST00000398527 CCDC65Q8IXS2 484 aa12.16□□□□□ -0.46
MSL3-207ENST00000398527 GOLGA1Q92805 767 aa12.16□□□□□ -0.46
MSL3-207ENST00000398527 MRFAP1L1Q96HT8 127 aa12.16□□□□□ -0.46
MSL3-207ENST00000398527 FSD1Q9BTV5 496 aa12.16□□□□□ -0.46
MSL3-207ENST00000398527 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.16□□□□□ -0.46
MSL3-207ENST00000398527 FPGT-TNNI3KV9GXZ4 949 aa12.16□□□□□ -0.46
MSL3-207ENST00000398527 NRXN2Q9P2S2 1712 aa12.16□□□□□ -0.46
MSL3-207ENST00000398527 SH3TC1Q8TE82 1336 aa12.16□□□□□ -0.46
MSL3-207ENST00000398527 LARGE1O95461 756 aa12.16□□□□□ -0.46
MSL3-207ENST00000398527 KRT72Q14CN4 511 aa12.16□□□□□ -0.46
MSL3-207ENST00000398527 LMBRD2Q68DH5 695 aaPredicted RBP12.16□□□□□ -0.46
MSL3-207ENST00000398527 CCDC186Q7Z3E2 898 aa12.16□□□□□ -0.46
MSL3-207ENST00000398527 FAM227BQ96M60 508 aa12.16□□□□□ -0.46
MSL3-207ENST00000398527 HAUS7Q99871 368 aa12.16□□□□□ -0.46
MSL3-207ENST00000398527 SEL1LQ9UBV2 794 aa12.16□□□□□ -0.46
MSL3-207ENST00000398527 CNPY2Q9Y2B0 182 aa12.16□□□□□ -0.46
MSL3-207ENST00000398527 SCN4AP35499 1836 aa12.15□□□□□ -0.46
MSL3-207ENST00000398527 A0A0D9SFI3 127 aa12.15□□□□□ -0.46
MSL3-207ENST00000398527 IQCA1LA6NCM1 817 aa12.15□□□□□ -0.46
MSL3-207ENST00000398527 NBPF26B4DH59 902 aa12.15□□□□□ -0.46
MSL3-207ENST00000398527 DEUP1Q05D60 604 aa12.15□□□□□ -0.46
MSL3-207ENST00000398527 NAALADL2Q58DX5 795 aa12.15□□□□□ -0.46
MSL3-207ENST00000398527 CCDC83Q8IWF9 413 aa12.15□□□□□ -0.46
MSL3-207ENST00000398527 NBPF15Q8N660 670 aa12.15□□□□□ -0.46
MSL3-207ENST00000398527 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.15□□□□□ -0.46
MSL3-207ENST00000398527 CHAMP1Q96JM3 812 aa12.15□□□□□ -0.46
MSL3-207ENST00000398527 MCOLN1Q9GZU1 580 aa12.15□□□□□ -0.46
MSL3-207ENST00000398527 ZHX3Q9H4I2 956 aa12.15□□□□□ -0.46
MSL3-207ENST00000398527 H7C1W4 665 aa12.15□□□□□ -0.46
MSL3-207ENST00000398527 DDNO94850 711 aaPredicted RBP12.15□□□□□ -0.46
MSL3-207ENST00000398527 PRPHP41219 470 aa12.15□□□□□ -0.46
MSL3-207ENST00000398527 USP5P45974 858 aa12.15□□□□□ -0.46
MSL3-207ENST00000398527 SFSWAPQ12872 951 aaKnown RBP12.15□□□□□ -0.46
MSL3-207ENST00000398527 SEPT2Q15019 361 aa12.15□□□□□ -0.46
MSL3-207ENST00000398527 IQCEQ6IPM2 695 aa12.15□□□□□ -0.46
MSL3-207ENST00000398527 CCDC80Q76M96 950 aa12.15□□□□□ -0.46
MSL3-207ENST00000398527 ANKRD7Q92527 254 aa12.15□□□□□ -0.46
MSL3-207ENST00000398527 SCLT1Q96NL6 688 aa12.15□□□□□ -0.46
MSL3-207ENST00000398527 CCDC8Q9H0W5 538 aaPredicted RBP12.15□□□□□ -0.46
MSL3-207ENST00000398527 TFIP11Q9UBB9 837 aaKnown RBP12.15□□□□□ -0.46
MSL3-207ENST00000398527 TPCN1Q9ULQ1 816 aa12.15□□□□□ -0.46
MSL3-207ENST00000398527 FER1L6Q2WGJ9 1857 aa12.14□□□□□ -0.47
MSL3-207ENST00000398527 KRT85P78386 507 aa12.14□□□□□ -0.47
MSL3-207ENST00000398527 EPHA10Q5JZY3 1008 aa12.14□□□□□ -0.47
MSL3-207ENST00000398527 SYT10Q6XYQ8 523 aa12.14□□□□□ -0.47
MSL3-207ENST00000398527 PACS2Q86VP3 889 aa12.14□□□□□ -0.47
MSL3-207ENST00000398527 PARP9Q8IXQ6 854 aa12.14□□□□□ -0.47
MSL3-207ENST00000398527 RBM17Q96I25 401 aaKnown RBP12.14□□□□□ -0.47
MSL3-207ENST00000398527 IWS1Q96ST2 819 aa12.14□□□□□ -0.47
MSL3-207ENST00000398527 EPAS1Q99814 870 aa12.14□□□□□ -0.47
MSL3-207ENST00000398527 LLPHQ9BRT6 129 aaKnown RBP12.14□□□□□ -0.47
MSL3-207ENST00000398527 BEGAINQ9BUH8 593 aa12.14□□□□□ -0.47
MSL3-207ENST00000398527 SCAND2PQ9GZW5 306 aaPredicted RBP12.14□□□□□ -0.47
MSL3-207ENST00000398527 TAF1DQ9H5J8 278 aaPredicted RBP12.14□□□□□ -0.47
MSL3-207ENST00000398527 C6orf203Q9P0P8 240 aaPredicted RBP12.14□□□□□ -0.47
MSL3-207ENST00000398527 ZMAT5Q9UDW3 170 aaKnown RBP12.14□□□□□ -0.47
MSL3-207ENST00000398527 DBNLQ9UJU6 430 aaKnown RBP12.14□□□□□ -0.47
MSL3-207ENST00000398527 ADAMTSL1Q8N6G6 1762 aa12.14□□□□□ -0.47
MSL3-207ENST00000398527 SH3BGRP55822 239 aaPredicted RBP12.14□□□□□ -0.47
MSL3-207ENST00000398527 DHX8Q14562 1220 aaKnown RBP12.14□□□□□ -0.47
MSL3-207ENST00000398527 PRPF38BQ5VTL8 546 aaKnown RBP12.14□□□□□ -0.47
MSL3-207ENST00000398527 ARMC9Q7Z3E5 817 aa12.14□□□□□ -0.47
MSL3-207ENST00000398527 TEX11Q8IYF3 940 aa12.14□□□□□ -0.47
MSL3-207ENST00000398527 MIGA1Q8NAN2 632 aa12.14□□□□□ -0.47
MSL3-207ENST00000398527 L3MBTL3Q96JM7 780 aaPredicted RBP12.14□□□□□ -0.47
MSL3-207ENST00000398527 BOLA2Q9H3K6 86 aa12.14□□□□□ -0.47
MSL3-207ENST00000398527 SPC25Q9HBM1 224 aa12.14□□□□□ -0.47
MSL3-207ENST00000398527 TLR7Q9NYK1 1049 aaKnown RBP12.14□□□□□ -0.47
MSL3-207ENST00000398527 ACAD8Q9UKU7 415 aa12.14□□□□□ -0.47
MSL3-207ENST00000398527 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.14□□□□□ -0.47
MSL3-207ENST00000398527 LTBP1Q14766 1721 aa12.13□□□□□ -0.47
MSL3-207ENST00000398527 E2F6O75461 281 aa12.13□□□□□ -0.47
MSL3-207ENST00000398527 CIAO1O76071 339 aa12.13□□□□□ -0.47
MSL3-207ENST00000398527 PIP4K2AP48426 406 aaPredicted RBP12.13□□□□□ -0.47
MSL3-207ENST00000398527 C2CD5Q86YS7 1000 aa12.13□□□□□ -0.47
MSL3-207ENST00000398527 ATRIPQ8WXE1 791 aa12.13□□□□□ -0.47
MSL3-207ENST00000398527 HELLSQ9NRZ9 838 aa12.13□□□□□ -0.47
MSL3-207ENST00000398527 ABCC12Q96J65 1359 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms