RNA–Protein interactions for RNA: ENST00000397149.3

SMU1-201, Transcript of SMU1, DNA replication regulator and spliceosomal factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMU1, Length 7,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMU1-201ENST00000397149 DZIP3Q86Y13 1208 aaKnown RBP13.54□□□□□ -0.24
SMU1-201ENST00000397149 MLXIPQ9HAP2 919 aa13.54□□□□□ -0.24
SMU1-201ENST00000397149 GOLGA8CPA6NN73 597 aa13.53□□□□□ -0.24
SMU1-201ENST00000397149 HEXIM1O94992 359 aaKnown RBP13.53□□□□□ -0.24
SMU1-201ENST00000397149 LRRC23Q53EV4 343 aaPredicted RBP13.53□□□□□ -0.24
SMU1-201ENST00000397149 ZBTB12Q9Y330 459 aaPredicted RBP13.53□□□□□ -0.24
SMU1-201ENST00000397149 RTCBQ9Y3I0 505 aaKnown RBP13.53□□□□□ -0.24
SMU1-201ENST00000397149 TESPA1A2RU30 521 aaPredicted RBP13.53□□□□□ -0.24
SMU1-201ENST00000397149 GARSP41250 739 aaKnown RBP13.53□□□□□ -0.24
SMU1-201ENST00000397149 PLCD1P51178 756 aa13.53□□□□□ -0.24
SMU1-201ENST00000397149 IWS1Q96ST2 819 aa13.53□□□□□ -0.24
SMU1-201ENST00000397149 RRAGAQ7L523 313 aa13.53□□□□□ -0.24
SMU1-201ENST00000397149 SUGCTQ9HAC7 445 aa13.53□□□□□ -0.24
SMU1-201ENST00000397149 CDV3Q9UKY7 258 aaKnown RBP13.53□□□□□ -0.24
SMU1-201ENST00000397149 CFLARO15519 480 aa13.53□□□□□ -0.24
SMU1-201ENST00000397149 ESRRBO95718 433 aa13.53□□□□□ -0.24
SMU1-201ENST00000397149 EYA3Q99504 573 aa13.53□□□□□ -0.24
SMU1-201ENST00000397149 TYW5A2RUC4 315 aaKnown RBP13.53□□□□□ -0.24
SMU1-201ENST00000397149 OAS2P29728 719 aaKnown RBP13.53□□□□□ -0.24
SMU1-201ENST00000397149 CFAP221Q4G0U5 840 aa13.52□□□□□ -0.24
SMU1-201ENST00000397149 AP1ARQ63HQ0 302 aa13.52□□□□□ -0.24
SMU1-201ENST00000397149 TPTE2Q6XPS3 522 aa13.52□□□□□ -0.24
SMU1-201ENST00000397149 SCYL3Q8IZE3 742 aa13.52□□□□□ -0.24
SMU1-201ENST00000397149 SLC7A5P2Q9GIP4 190 aa13.52□□□□□ -0.24
SMU1-201ENST00000397149 NYXQ9GZU5 481 aa13.52□□□□□ -0.24
SMU1-201ENST00000397149 COG4Q9H9E3 785 aa13.52□□□□□ -0.24
SMU1-201ENST00000397149 CAPN11Q9UMQ6 739 aa13.52□□□□□ -0.24
SMU1-201ENST00000397149 B4E1Z4 1266 aa13.52□□□□□ -0.24
SMU1-201ENST00000397149 BUB1O43683 1085 aa13.52□□□□□ -0.24
SMU1-201ENST00000397149 SFMBT2Q5VUG0 894 aa13.52□□□□□ -0.24
SMU1-201ENST00000397149 RSRC2Q7L4I2 434 aaKnown RBP13.52□□□□□ -0.24
SMU1-201ENST00000397149 BLZF1Q9H2G9 400 aa13.52□□□□□ -0.24
SMU1-201ENST00000397149 hCG_1642624A0A1W2PR95 340 aa13.52□□□□□ -0.24
SMU1-201ENST00000397149 TRIM27P14373 513 aa13.52□□□□□ -0.24
SMU1-201ENST00000397149 SOX5P35711 763 aa13.52□□□□□ -0.24
SMU1-201ENST00000397149 NAA35Q5VZE5 725 aa13.52□□□□□ -0.24
SMU1-201ENST00000397149 EPS15L1Q9UBC2 864 aa13.52□□□□□ -0.24
SMU1-201ENST00000397149 KCNK3O14649 394 aa13.52□□□□□ -0.25
SMU1-201ENST00000397149 DTNBO60941 627 aa13.52□□□□□ -0.25
SMU1-201ENST00000397149 UFL1O94874 794 aa13.52□□□□□ -0.25
SMU1-201ENST00000397149 GNGT1P63211 74 aa13.52□□□□□ -0.25
SMU1-201ENST00000397149 TEKT1Q969V4 418 aa13.52□□□□□ -0.25
SMU1-201ENST00000397149 MMTAG2Q9BU76 263 aaKnown RBP13.52□□□□□ -0.25
SMU1-201ENST00000397149 SYNDIG1Q9H7V2 258 aa13.52□□□□□ -0.25
SMU1-201ENST00000397149 DISC1Q9NRI5 854 aa13.52□□□□□ -0.25
SMU1-201ENST00000397149 DLATP10515 647 aaKnown RBP13.52□□□□□ -0.25
SMU1-201ENST00000397149 ESRRGP62508 458 aa13.52□□□□□ -0.25
SMU1-201ENST00000397149 ALDH1L2Q3SY69 923 aa13.52□□□□□ -0.25
SMU1-201ENST00000397149 GLE1Q53GS7 698 aaKnown RBP13.52□□□□□ -0.25
SMU1-201ENST00000397149 ZBTB33Q86T24 672 aa13.52□□□□□ -0.25
SMU1-201ENST00000397149 ABI1Q8IZP0 508 aa13.52□□□□□ -0.25
SMU1-201ENST00000397149 SYCE1Q8N0S2 351 aa13.52□□□□□ -0.25
SMU1-201ENST00000397149 RAPGEF5Q92565 580 aa13.52□□□□□ -0.25
SMU1-201ENST00000397149 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.52□□□□□ -0.25
SMU1-201ENST00000397149 MBD4O95243 580 aa13.52□□□□□ -0.25
SMU1-201ENST00000397149 LRCH2Q5VUJ6 765 aa13.52□□□□□ -0.25
SMU1-201ENST00000397149 TTC6Q86TZ1 520 aa13.52□□□□□ -0.25
SMU1-201ENST00000397149 CCDC24Q8N4L8 307 aa13.52□□□□□ -0.25
SMU1-201ENST00000397149 LSM14BQ9BX40 385 aaKnown RBP13.52□□□□□ -0.25
SMU1-201ENST00000397149 AMFRQ9UKV5 643 aa13.52□□□□□ -0.25
SMU1-201ENST00000397149 KCNA1Q09470 495 aa13.51□□□□□ -0.25
SMU1-201ENST00000397149 PAK1Q13153 545 aa13.51□□□□□ -0.25
SMU1-201ENST00000397149 HADHQ16836 314 aaKnown RBP13.51□□□□□ -0.25
SMU1-201ENST00000397149 TBC1D10BQ4KMP7 808 aaPredicted RBP13.51□□□□□ -0.25
SMU1-201ENST00000397149 TAGAPQ8N103 731 aa13.51□□□□□ -0.25
SMU1-201ENST00000397149 CAPRIN1Q14444 709 aaKnown RBP13.51□□□□□ -0.25
SMU1-201ENST00000397149 KCTD17Q8N5Z5 321 aa13.51□□□□□ -0.25
SMU1-201ENST00000397149 PHF8Q9UPP1 1060 aa13.51□□□□□ -0.25
SMU1-201ENST00000397149 PTPRCP08575 1304 aa13.51□□□□□ -0.25
SMU1-201ENST00000397149 DKC1O60832 514 aaKnown RBP eCLIP13.51□□□□□ -0.25
SMU1-201ENST00000397149 VCPP55072 806 aaKnown RBP13.51□□□□□ -0.25
SMU1-201ENST00000397149 NONOQ15233 471 aaKnown RBP eCLIP13.51□□□□□ -0.25
SMU1-201ENST00000397149 LRRC8CQ8TDW0 803 aa13.51□□□□□ -0.25
SMU1-201ENST00000397149 POLIQ9UNA4 740 aa13.51□□□□□ -0.25
SMU1-201ENST00000397149 ZKSCAN5Q9Y2L8 839 aa13.51□□□□□ -0.25
SMU1-201ENST00000397149 SCINQ9Y6U3 715 aa13.51□□□□□ -0.25
SMU1-201ENST00000397149 ZSCAN9O15535 394 aaPredicted RBP13.51□□□□□ -0.25
SMU1-201ENST00000397149 PRDM1O75626 825 aa13.51□□□□□ -0.25
SMU1-201ENST00000397149 FLOT1O75955 427 aa13.51□□□□□ -0.25
SMU1-201ENST00000397149 GNAT2P19087 354 aa13.51□□□□□ -0.25
SMU1-201ENST00000397149 LLGL1Q15334 1064 aa13.51□□□□□ -0.25
SMU1-201ENST00000397149 C17orf53Q8N3J3 647 aaPredicted RBP13.51□□□□□ -0.25
SMU1-201ENST00000397149 V9GY48 417 aaPredicted RBP13.51□□□□□ -0.25
SMU1-201ENST00000397149 LRRD1A4D1F6 860 aa13.51□□□□□ -0.25
SMU1-201ENST00000397149 IFNAR2P48551 515 aa13.51□□□□□ -0.25
SMU1-201ENST00000397149 POLE2P56282 527 aa13.51□□□□□ -0.25
SMU1-201ENST00000397149 YWHAHQ04917 246 aaPredicted RBP13.51□□□□□ -0.25
SMU1-201ENST00000397149 MTMR3Q13615 1198 aa13.51□□□□□ -0.25
SMU1-201ENST00000397149 ANO4Q32M45 955 aa13.51□□□□□ -0.25
SMU1-201ENST00000397149 RAB17Q9H0T7 212 aa13.51□□□□□ -0.25
SMU1-201ENST00000397149 KRIT1O00522 736 aa13.5□□□□□ -0.25
SMU1-201ENST00000397149 HSP90AA5PQ58FG0 334 aa13.5□□□□□ -0.25
SMU1-201ENST00000397149 CCNYQ8ND76 341 aa13.5□□□□□ -0.25
SMU1-201ENST00000397149 HAUS1Q96CS2 278 aa13.5□□□□□ -0.25
SMU1-201ENST00000397149 ABHD8Q96I13 439 aa13.5□□□□□ -0.25
SMU1-201ENST00000397149 GIMAP4Q9NUV9 329 aa13.5□□□□□ -0.25
SMU1-201ENST00000397149 TSR3Q9UJK0 312 aaKnown RBP13.5□□□□□ -0.25
SMU1-201ENST00000397149 A6NJR5 290 aa13.5□□□□□ -0.25
SMU1-201ENST00000397149 GADL1Q6ZQY3 521 aa13.5□□□□□ -0.25
SMU1-201ENST00000397149 RPAINQ86UA6 219 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms