RNA–Protein interactions for RNA: ENST00000395198.7

HERC4-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERC4, Length 4,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-204ENST00000395198 NIFKQ9BYG3 293 aaKnown RBP4.83□□□□□ -1.64
HERC4-204ENST00000395198 RRP7BPQ9NSQ0 103 aa4.83□□□□□ -1.64
HERC4-204ENST00000395198 ZFATQ9P243 1243 aa4.83□□□□□ -1.64
HERC4-204ENST00000395198 KIAA1468Q9P260 1216 aa4.83□□□□□ -1.64
HERC4-204ENST00000395198 PHTF1Q9UMS5 762 aa4.83□□□□□ -1.64
HERC4-204ENST00000395198 AFG3L2Q9Y4W6 797 aa4.83□□□□□ -1.64
HERC4-204ENST00000395198 GRK2P25098 689 aa4.83□□□□□ -1.64
HERC4-204ENST00000395198 MAPK8P45983 427 aa4.83□□□□□ -1.64
HERC4-204ENST00000395198 C21orf58P58505 322 aa4.83□□□□□ -1.64
HERC4-204ENST00000395198 SEMA3AQ14563 771 aa4.83□□□□□ -1.64
HERC4-204ENST00000395198 KIF22Q14807 665 aa4.83□□□□□ -1.64
HERC4-204ENST00000395198 VPS53Q5VIR6 699 aa4.83□□□□□ -1.64
HERC4-204ENST00000395198 C1orf228Q6PIY5 440 aa4.83□□□□□ -1.64
HERC4-204ENST00000395198 BTN2A1Q7KYR7 527 aa4.83□□□□□ -1.64
HERC4-204ENST00000395198 TAOK1Q7L7X3 1001 aa4.83□□□□□ -1.64
HERC4-204ENST00000395198 CCDC65Q8IXS2 484 aa4.83□□□□□ -1.64
HERC4-204ENST00000395198 TEX11Q8IYF3 940 aa4.83□□□□□ -1.64
HERC4-204ENST00000395198 TRIM22Q8IYM9 498 aa4.83□□□□□ -1.64
HERC4-204ENST00000395198 GOT1L1Q8NHS2 421 aaPredicted RBP4.83□□□□□ -1.64
HERC4-204ENST00000395198 RTF1Q92541 710 aaKnown RBP4.83□□□□□ -1.64
HERC4-204ENST00000395198 NEK1Q96PY6 1258 aa4.83□□□□□ -1.64
HERC4-204ENST00000395198 GPATCH1Q9BRR8 931 aaKnown RBP4.83□□□□□ -1.64
HERC4-204ENST00000395198 PLVAPQ9BX97 442 aa4.83□□□□□ -1.64
HERC4-204ENST00000395198 SLC12A5Q9H2X9 1139 aa4.83□□□□□ -1.64
HERC4-204ENST00000395198 AASDHPPTQ9NRN7 309 aa4.83□□□□□ -1.64
HERC4-204ENST00000395198 RASSF1Q9NS23 344 aa4.83□□□□□ -1.64
HERC4-204ENST00000395198 RRN3Q9NYV6 651 aa4.83□□□□□ -1.64
HERC4-204ENST00000395198 LMCD1Q9NZU5 365 aa4.83□□□□□ -1.64
HERC4-204ENST00000395198 WDR35Q9P2L0 1181 aa4.83□□□□□ -1.64
HERC4-204ENST00000395198 NFKBIL1Q9UBC1 381 aaPredicted RBP4.83□□□□□ -1.64
HERC4-204ENST00000395198 PPARGC1AQ9UBK2 798 aaKnown RBP4.83□□□□□ -1.64
HERC4-204ENST00000395198 PLOD2O00469 737 aa4.82□□□□□ -1.64
HERC4-204ENST00000395198 DKK1O94907 266 aa4.82□□□□□ -1.64
HERC4-204ENST00000395198 LARGE1O95461 756 aa4.82□□□□□ -1.64
HERC4-204ENST00000395198 CNOT4O95628 575 aaKnown RBP4.82□□□□□ -1.64
HERC4-204ENST00000395198 CD9P21926 228 aa4.82□□□□□ -1.64
HERC4-204ENST00000395198 GARTP22102 1010 aa4.82□□□□□ -1.64
HERC4-204ENST00000395198 RPIAP49247 311 aa4.82□□□□□ -1.64
HERC4-204ENST00000395198 PRKG2Q13237 762 aa4.82□□□□□ -1.64
HERC4-204ENST00000395198 PICALMQ13492 652 aa4.82□□□□□ -1.64
HERC4-204ENST00000395198 PLCB4Q15147 1175 aa4.82□□□□□ -1.64
HERC4-204ENST00000395198 MAJINQ3KP22 176 aa4.82□□□□□ -1.64
HERC4-204ENST00000395198 TM4SF20Q53R12 229 aa4.82□□□□□ -1.64
HERC4-204ENST00000395198 MFSD6Q6ZSS7 791 aa4.82□□□□□ -1.64
HERC4-204ENST00000395198 TBC1D21Q8IYX1 336 aa4.82□□□□□ -1.64
HERC4-204ENST00000395198 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.82□□□□□ -1.64
HERC4-204ENST00000395198 HDAC7Q8WUI4 952 aa4.82□□□□□ -1.64
HERC4-204ENST00000395198 CFHR5Q9BXR6 569 aa4.82□□□□□ -1.64
HERC4-204ENST00000395198 KIAA1586Q9HCI6 787 aa4.82□□□□□ -1.64
HERC4-204ENST00000395198 CARMIL2Q6F5E8 1435 aa4.82□□□□□ -1.64
HERC4-204ENST00000395198 ABHD14A-ACY1A0A1B0GW23 586 aa4.82□□□□□ -1.64
HERC4-204ENST00000395198 HOXC11O43248 304 aaPredicted RBP4.82□□□□□ -1.64
HERC4-204ENST00000395198 ADAMTS4O75173 837 aa4.82□□□□□ -1.64
HERC4-204ENST00000395198 DDIT3P35638 169 aa4.82□□□□□ -1.64
HERC4-204ENST00000395198 TM4SF4P48230 202 aa4.82□□□□□ -1.64
HERC4-204ENST00000395198 NR1H3Q13133 447 aa4.82□□□□□ -1.64
HERC4-204ENST00000395198 TNIP1Q15025 636 aa4.82□□□□□ -1.64
HERC4-204ENST00000395198 SETMARQ53H47 684 aaPredicted RBP4.82□□□□□ -1.64
HERC4-204ENST00000395198 HHATQ5VTY9 493 aa4.82□□□□□ -1.64
HERC4-204ENST00000395198 LRRC49Q8IUZ0 686 aa4.82□□□□□ -1.64
HERC4-204ENST00000395198 PEX5LQ8IYB4 626 aa4.82□□□□□ -1.64
HERC4-204ENST00000395198 AFAP1L2Q8N4X5 818 aa4.82□□□□□ -1.64
HERC4-204ENST00000395198 JPH4Q96JJ6 628 aa4.82□□□□□ -1.64
HERC4-204ENST00000395198 PRIMPOLQ96LW4 560 aa4.82□□□□□ -1.64
HERC4-204ENST00000395198 DNAI2Q9GZS0 605 aa4.82□□□□□ -1.64
HERC4-204ENST00000395198 PRM3Q9NNZ6 103 aa4.82□□□□□ -1.64
HERC4-204ENST00000395198 OSGEPQ9NPF4 335 aa4.82□□□□□ -1.64
HERC4-204ENST00000395198 CDKN2AIPQ9NXV6 580 aaPredicted RBP4.82□□□□□ -1.64
HERC4-204ENST00000395198 ZRANB1Q9UGI0 708 aa4.82□□□□□ -1.64
HERC4-204ENST00000395198 DMTF1Q9Y222 760 aa4.82□□□□□ -1.64
HERC4-204ENST00000395198 EEA1Q15075 1411 aa4.82□□□□□ -1.64
HERC4-204ENST00000395198 MCF2LO15068 1137 aa4.82□□□□□ -1.64
HERC4-204ENST00000395198 EYA4O95677 639 aa4.82□□□□□ -1.64
HERC4-204ENST00000395198 MT-ND3P03897 115 aa4.82□□□□□ -1.64
HERC4-204ENST00000395198 MAPK9P45984 424 aa4.82□□□□□ -1.64
HERC4-204ENST00000395198 MNX1P50219 401 aaPredicted RBP4.82□□□□□ -1.64
HERC4-204ENST00000395198 USP11P51784 963 aa4.82□□□□□ -1.64
HERC4-204ENST00000395198 NFKB2Q00653 900 aa4.82□□□□□ -1.64
HERC4-204ENST00000395198 LRRC74AQ0VAA2 488 aa4.82□□□□□ -1.64
HERC4-204ENST00000395198 WWC2Q6AWC2 1192 aa4.82□□□□□ -1.64
HERC4-204ENST00000395198 SPATA2LQ8IUW3 424 aaPredicted RBP4.82□□□□□ -1.64
HERC4-204ENST00000395198 TNIP2Q8NFZ5 429 aa4.82□□□□□ -1.64
HERC4-204ENST00000395198 SPATA18Q8TC71 538 aa4.82□□□□□ -1.64
HERC4-204ENST00000395198 CABLES1Q8TDN4 633 aa4.82□□□□□ -1.64
HERC4-204ENST00000395198 YIPF4Q9BSR8 244 aa4.82□□□□□ -1.64
HERC4-204ENST00000395198 CYLDQ9NQC7 956 aa4.82□□□□□ -1.64
HERC4-204ENST00000395198 A0A0G2JS52 829 aa4.81□□□□□ -1.64
HERC4-204ENST00000395198 C17orf113A0A1B0GUU1 675 aa4.81□□□□□ -1.64
HERC4-204ENST00000395198 TMOD1P28289 359 aa4.81□□□□□ -1.64
HERC4-204ENST00000395198 PMLP29590 882 aa4.81□□□□□ -1.64
HERC4-204ENST00000395198 CTDSPL2Q05D32 466 aa4.81□□□□□ -1.64
HERC4-204ENST00000395198 TRIM14Q14142 442 aa4.81□□□□□ -1.64
HERC4-204ENST00000395198 GFOD2Q3B7J2 385 aa4.81□□□□□ -1.64
HERC4-204ENST00000395198 HECTD3Q5T447 861 aa4.81□□□□□ -1.64
HERC4-204ENST00000395198 ABRAXAS1Q6UWZ7 409 aa4.81□□□□□ -1.64
HERC4-204ENST00000395198 FAM200AQ8TCP9 573 aa4.81□□□□□ -1.64
HERC4-204ENST00000395198 SPIRE2Q8WWL2 714 aa4.81□□□□□ -1.64
HERC4-204ENST00000395198 TBC1D5Q92609 795 aa4.81□□□□□ -1.64
HERC4-204ENST00000395198 B3GNT4Q9C0J1 378 aa4.81□□□□□ -1.64
HERC4-204ENST00000395198 COPRSQ9NQ92 184 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms