RNA–Protein interactions for RNA: ENST00000394419.8

ACTN1-203, Transcript of actinin alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ACTN1, Length 3,464 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-203ENST00000394419 ZNF579Q8NAF0 562 aaKnown RBP11.88□□□□□ -0.51
ACTN1-203ENST00000394419 PHF20Q9BVI0 1012 aa11.88□□□□□ -0.51
ACTN1-203ENST00000394419 ZHX3Q9H4I2 956 aa11.88□□□□□ -0.51
ACTN1-203ENST00000394419 KCPQ6ZWJ8 1503 aa11.88□□□□□ -0.51
ACTN1-203ENST00000394419 RPN1P04843 607 aaKnown RBP11.88□□□□□ -0.51
ACTN1-203ENST00000394419 CALML3P27482 149 aa11.88□□□□□ -0.51
ACTN1-203ENST00000394419 PPP2R5BQ15173 497 aa11.88□□□□□ -0.51
ACTN1-203ENST00000394419 WWC2Q6AWC2 1192 aa11.88□□□□□ -0.51
ACTN1-203ENST00000394419 MARCH10Q8NA82 808 aaPredicted RBP11.88□□□□□ -0.51
ACTN1-203ENST00000394419 TRIM34Q9BYJ4 488 aa11.88□□□□□ -0.51
ACTN1-203ENST00000394419 DEF6Q9H4E7 631 aa11.88□□□□□ -0.51
ACTN1-203ENST00000394419 LUC7L2Q9Y383 392 aaKnown RBP11.88□□□□□ -0.51
ACTN1-203ENST00000394419 MATR3P43243 847 aaKnown RBP eCLIP11.88□□□□□ -0.512e-6■■■■□ 22.4
ACTN1-203ENST00000394419 SMC1AQ14683 1233 aaKnown RBP11.88□□□□□ -0.51
ACTN1-203ENST00000394419 TBC1D9BQ66K14 1250 aa11.88□□□□□ -0.51
ACTN1-203ENST00000394419 TPTE2Q6XPS3 522 aa11.88□□□□□ -0.51
ACTN1-203ENST00000394419 NGLY1Q96IV0 654 aa11.88□□□□□ -0.51
ACTN1-203ENST00000394419 TFR2Q9UP52 801 aa11.88□□□□□ -0.51
ACTN1-203ENST00000394419 SIPA1L3O60292 1781 aaPredicted RBP11.88□□□□□ -0.51
ACTN1-203ENST00000394419 TRPM3Q9HCF6 1732 aaPredicted RBP11.88□□□□□ -0.51
ACTN1-203ENST00000394419 USP54Q70EL1 1684 aa11.88□□□□□ -0.51
ACTN1-203ENST00000394419 CTAGE15A4D2H0 777 aa11.87□□□□□ -0.51
ACTN1-203ENST00000394419 PSMA7O14818 248 aa11.87□□□□□ -0.51
ACTN1-203ENST00000394419 MYO1BO43795 1136 aa11.87□□□□□ -0.51
ACTN1-203ENST00000394419 CCNT1O60563 726 aaKnown RBP11.87□□□□□ -0.51
ACTN1-203ENST00000394419 CTAGE8P0CG41 777 aa11.87□□□□□ -0.51
ACTN1-203ENST00000394419 COPB1P53618 953 aaKnown RBP11.87□□□□□ -0.51
ACTN1-203ENST00000394419 CTAGE6Q86UF2 777 aa11.87□□□□□ -0.51
ACTN1-203ENST00000394419 CTAGE4Q8IX94 777 aa11.87□□□□□ -0.51
ACTN1-203ENST00000394419 RIOK1Q9BRS2 568 aaKnown RBP11.87□□□□□ -0.51
ACTN1-203ENST00000394419 RMND1Q9NWS8 449 aa11.87□□□□□ -0.51
ACTN1-203ENST00000394419 PICALMQ13492 652 aa11.87□□□□□ -0.51
ACTN1-203ENST00000394419 SAMD1Q6SPF0 538 aaPredicted RBP11.87□□□□□ -0.51
ACTN1-203ENST00000394419 AK7Q96M32 723 aa11.87□□□□□ -0.51
ACTN1-203ENST00000394419 C8orf37Q96NL8 207 aa11.87□□□□□ -0.51
ACTN1-203ENST00000394419 BSDC1Q9NW68 430 aaPredicted RBP11.87□□□□□ -0.51
ACTN1-203ENST00000394419 SEC63Q9UGP8 760 aaKnown RBP11.87□□□□□ -0.51
ACTN1-203ENST00000394419 ADGRG1Q9Y653 693 aa11.87□□□□□ -0.51
ACTN1-203ENST00000394419 BCL9O00512 1426 aa11.87□□□□□ -0.51
ACTN1-203ENST00000394419 G3V3G9 751 aa11.87□□□□□ -0.51
ACTN1-203ENST00000394419 ERLIN1O75477 346 aa11.87□□□□□ -0.51
ACTN1-203ENST00000394419 ZNF18P17022 549 aa11.87□□□□□ -0.51
ACTN1-203ENST00000394419 SPAG1Q07617 926 aa11.87□□□□□ -0.51
ACTN1-203ENST00000394419 CCDC122Q5T0U0 273 aa11.87□□□□□ -0.51
ACTN1-203ENST00000394419 DCAF8Q5TAQ9 597 aa11.87□□□□□ -0.51
ACTN1-203ENST00000394419 TXNRD3Q86VQ6 643 aa11.87□□□□□ -0.51
ACTN1-203ENST00000394419 FCHSD1Q86WN1 690 aa11.87□□□□□ -0.51
ACTN1-203ENST00000394419 GPR161Q8N6U8 529 aaKnown RBP11.87□□□□□ -0.51
ACTN1-203ENST00000394419 NSUN4Q96CB9 384 aaKnown RBP11.87□□□□□ -0.51
ACTN1-203ENST00000394419 MED15Q96RN5 788 aa11.87□□□□□ -0.51
ACTN1-203ENST00000394419 UBA5Q9GZZ9 404 aa11.87□□□□□ -0.51
ACTN1-203ENST00000394419 JADE2Q9NQC1 790 aa11.87□□□□□ -0.51
ACTN1-203ENST00000394419 A0A1B0GTH6 734 aa11.86□□□□□ -0.51
ACTN1-203ENST00000394419 MACROD2A1Z1Q3 448 aa11.86□□□□□ -0.51
ACTN1-203ENST00000394419 MFAP3LO75121 409 aa11.86□□□□□ -0.51
ACTN1-203ENST00000394419 BAG3O95817 575 aa11.86□□□□□ -0.51
ACTN1-203ENST00000394419 TXKP42681 527 aa11.86□□□□□ -0.51
ACTN1-203ENST00000394419 PRCPP42785 496 aa11.86□□□□□ -0.51
ACTN1-203ENST00000394419 PDE4DQ08499 809 aa11.86□□□□□ -0.51
ACTN1-203ENST00000394419 CSGALNACT2Q8N6G5 542 aa11.86□□□□□ -0.51
ACTN1-203ENST00000394419 GOLGA6L1Q8N7Z2 621 aa11.86□□□□□ -0.51
ACTN1-203ENST00000394419 PSMB7Q99436 277 aa11.86□□□□□ -0.51
ACTN1-203ENST00000394419 EXOC1Q9NV70 894 aa11.86□□□□□ -0.51
ACTN1-203ENST00000394419 PHRF1Q9P1Y6 1649 aaKnown RBP11.86□□□□□ -0.51
ACTN1-203ENST00000394419 TBC1D8BQ0IIM8 1120 aa11.86□□□□□ -0.51
ACTN1-203ENST00000394419 FKBP15Q5T1M5 1219 aa11.86□□□□□ -0.51
ACTN1-203ENST00000394419 DYMQ7RTS9 669 aa11.86□□□□□ -0.51
ACTN1-203ENST00000394419 SMARCC1Q92922 1105 aaPredicted RBP11.86□□□□□ -0.51
ACTN1-203ENST00000394419 CHP1Q99653 195 aa11.86□□□□□ -0.51
ACTN1-203ENST00000394419 VPS18Q9P253 973 aa11.86□□□□□ -0.51
ACTN1-203ENST00000394419 ADD3Q9UEY8 706 aaKnown RBP11.86□□□□□ -0.51
ACTN1-203ENST00000394419 DCCP43146 1447 aa11.86□□□□□ -0.51
ACTN1-203ENST00000394419 ZNF804BA4D1E1 1349 aa11.86□□□□□ -0.51
ACTN1-203ENST00000394419 C6orf229H3BNL8 230 aa11.85□□□□□ -0.51
ACTN1-203ENST00000394419 GTPBP6O43824 516 aaPredicted RBP11.85□□□□□ -0.51
ACTN1-203ENST00000394419 DDAH1O94760 285 aa11.85□□□□□ -0.51
ACTN1-203ENST00000394419 H2AFXP16104 143 aaPredicted RBP11.85□□□□□ -0.51
ACTN1-203ENST00000394419 TECP42680 631 aa11.85□□□□□ -0.51
ACTN1-203ENST00000394419 KCNJ6P48051 423 aa11.85□□□□□ -0.51
ACTN1-203ENST00000394419 SARSP49591 514 aaKnown RBP11.85□□□□□ -0.51
ACTN1-203ENST00000394419 DPYDQ12882 1025 aa11.85□□□□□ -0.51
ACTN1-203ENST00000394419 CCDC93Q567U6 631 aa11.85□□□□□ -0.51
ACTN1-203ENST00000394419 CYP26C1Q6V0L0 522 aa11.85□□□□□ -0.51
ACTN1-203ENST00000394419 NAPGQ99747 312 aaPredicted RBP11.85□□□□□ -0.51
ACTN1-203ENST00000394419 BRIP1Q9BX63 1249 aa11.85□□□□□ -0.51
ACTN1-203ENST00000394419 TRIM10Q9UDY6 481 aa11.85□□□□□ -0.51
ACTN1-203ENST00000394419 RFC4P35249 363 aa11.85□□□□□ -0.51
ACTN1-203ENST00000394419 NCAPH2Q6IBW4 605 aa11.85□□□□□ -0.51
ACTN1-203ENST00000394419 RASGRP2Q7LDG7 609 aa11.85□□□□□ -0.51
ACTN1-203ENST00000394419 TMTC1Q8IUR5 882 aa11.85□□□□□ -0.51
ACTN1-203ENST00000394419 CEP112Q8N8E3 955 aa11.85□□□□□ -0.51
ACTN1-203ENST00000394419 CCDC148Q8NFR7 591 aa11.85□□□□□ -0.51
ACTN1-203ENST00000394419 MRFAP1Q9Y605 127 aa11.85□□□□□ -0.51
ACTN1-203ENST00000394419 FHOD1Q9Y613 1164 aa11.85□□□□□ -0.51
ACTN1-203ENST00000394419 B4DLN1 442 aa11.85□□□□□ -0.51
ACTN1-203ENST00000394419 PPP1R3GB7ZBB8 358 aa11.85□□□□□ -0.51
ACTN1-203ENST00000394419 ADAMTS3O15072 1205 aa11.85□□□□□ -0.51
ACTN1-203ENST00000394419 ZMYND10O75800 440 aa11.85□□□□□ -0.51
ACTN1-203ENST00000394419 GYPCP04921 128 aa11.85□□□□□ -0.51
ACTN1-203ENST00000394419 PARP1P09874 1014 aaKnown RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms