RNA–Protein interactions for RNA: ENST00000390919.1

RNU6-220P-201, Transcript of RNA, U6 small nuclear 220, pseudogene, humanhuman

BASIC

Gene RNU6-220P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-220P-201ENST00000390919 CCT5P48643 541 aa3.09□□□□□ -1.91
RNU6-220P-201ENST00000390919 YARSP54577 528 aaKnown RBP3.09□□□□□ -1.91
RNU6-220P-201ENST00000390919 AK2P54819 239 aa3.09□□□□□ -1.91
RNU6-220P-201ENST00000390919 GJA9P57773 515 aa3.09□□□□□ -1.91
RNU6-220P-201ENST00000390919 RBM10P98175 930 aaKnown RBP3.09□□□□□ -1.91
RNU6-220P-201ENST00000390919 OCRLQ01968 901 aa3.09□□□□□ -1.91
RNU6-220P-201ENST00000390919 PTPN11Q06124 597 aaPredicted RBP3.09□□□□□ -1.91
RNU6-220P-201ENST00000390919 SPEM2Q0P670 501 aa3.09□□□□□ -1.91
RNU6-220P-201ENST00000390919 SFSWAPQ12872 951 aaKnown RBP3.09□□□□□ -1.91
RNU6-220P-201ENST00000390919 GBX1Q14549 363 aa3.09□□□□□ -1.91
RNU6-220P-201ENST00000390919 ZNF460Q14592 562 aa3.09□□□□□ -1.91
RNU6-220P-201ENST00000390919 SEPT7Q16181 437 aaKnown RBP3.09□□□□□ -1.91
RNU6-220P-201ENST00000390919 ATP13A4Q4VNC1 1196 aa3.09□□□□□ -1.91
RNU6-220P-201ENST00000390919 PIK3R6Q5UE93 754 aa3.09□□□□□ -1.91
RNU6-220P-201ENST00000390919 CDCA2Q69YH5 1023 aaPredicted RBP3.09□□□□□ -1.91
RNU6-220P-201ENST00000390919 POMZP3Q6PJE2 187 aa3.09□□□□□ -1.91
RNU6-220P-201ENST00000390919 MMS22LQ6ZRQ5 1243 aa3.09□□□□□ -1.91
RNU6-220P-201ENST00000390919 ZNF227Q86WZ6 799 aa3.09□□□□□ -1.91
RNU6-220P-201ENST00000390919 DRC7Q8IY82 874 aa3.09□□□□□ -1.91
RNU6-220P-201ENST00000390919 FAM186BQ8IYM0 893 aa3.09□□□□□ -1.91
RNU6-220P-201ENST00000390919 PHACTR4Q8IZ21 702 aa3.09□□□□□ -1.91
RNU6-220P-201ENST00000390919 CCDC89Q8N998 374 aa3.09□□□□□ -1.91
RNU6-220P-201ENST00000390919 SNIP1Q8TAD8 396 aaKnown RBP3.09□□□□□ -1.91
RNU6-220P-201ENST00000390919 SLC7A14Q8TBB6 771 aa3.09□□□□□ -1.91
RNU6-220P-201ENST00000390919 STK35Q8TDR2 534 aa3.09□□□□□ -1.91
RNU6-220P-201ENST00000390919 SMARCC1Q92922 1105 aaPredicted RBP3.09□□□□□ -1.91
RNU6-220P-201ENST00000390919 PTPRN2Q92932 1015 aa3.09□□□□□ -1.91
RNU6-220P-201ENST00000390919 GJA10Q969M2 543 aa3.09□□□□□ -1.91
RNU6-220P-201ENST00000390919 PLPPR2Q96GM1 343 aa3.09□□□□□ -1.91
RNU6-220P-201ENST00000390919 FUBP3Q96I24 572 aaKnown RBP eCLIP3.09□□□□□ -1.91
RNU6-220P-201ENST00000390919 TRIM8Q9BZR9 551 aa3.09□□□□□ -1.91
RNU6-220P-201ENST00000390919 SLC13A1Q9BZW2 595 aa3.09□□□□□ -1.91
RNU6-220P-201ENST00000390919 SLC52A2Q9HAB3 445 aa3.09□□□□□ -1.91
RNU6-220P-201ENST00000390919 NGRNQ9NPE2 291 aaKnown RBP3.09□□□□□ -1.91
RNU6-220P-201ENST00000390919 OSGEPQ9NPF4 335 aa3.09□□□□□ -1.91
RNU6-220P-201ENST00000390919 NMRK2Q9NPI5 230 aa3.09□□□□□ -1.91
RNU6-220P-201ENST00000390919 PICK1Q9NRD5 415 aa3.09□□□□□ -1.91
RNU6-220P-201ENST00000390919 PHTF1Q9UMS5 762 aa3.09□□□□□ -1.91
RNU6-220P-201ENST00000390919 DMTF1Q9Y222 760 aa3.09□□□□□ -1.91
RNU6-220P-201ENST00000390919 ZKSCAN5Q9Y2L8 839 aa3.09□□□□□ -1.91
RNU6-220P-201ENST00000390919 CORINQ9Y5Q5 1042 aa3.09□□□□□ -1.91
RNU6-220P-201ENST00000390919 MORC2Q9Y6X9 1032 aaPredicted RBP3.09□□□□□ -1.91
RNU6-220P-201ENST00000390919 LOC102724428A0A0B4J2F2 783 aa3.08□□□□□ -1.92
RNU6-220P-201ENST00000390919 TTC24A2A3L6 582 aaPredicted RBP3.08□□□□□ -1.92
RNU6-220P-201ENST00000390919 PRAMEF27A3QJZ7 478 aa3.08□□□□□ -1.92
RNU6-220P-201ENST00000390919 SPDYE3A6NKU9 549 aa3.08□□□□□ -1.92
RNU6-220P-201ENST00000390919 NFKBIEO00221 500 aa3.08□□□□□ -1.92
RNU6-220P-201ENST00000390919 APAF1O14727 1248 aa3.08□□□□□ -1.92
RNU6-220P-201ENST00000390919 PMM2O15305 246 aa3.08□□□□□ -1.92
RNU6-220P-201ENST00000390919 NBNO60934 754 aa3.08□□□□□ -1.92
RNU6-220P-201ENST00000390919 PRKD3O94806 890 aa3.08□□□□□ -1.92
RNU6-220P-201ENST00000390919 APBA3O96018 575 aa3.08□□□□□ -1.92
RNU6-220P-201ENST00000390919 F11P03951 625 aa3.08□□□□□ -1.92
RNU6-220P-201ENST00000390919 PGRP06401 933 aa3.08□□□□□ -1.92
RNU6-220P-201ENST00000390919 EPHX1P07099 455 aa3.08□□□□□ -1.92
RNU6-220P-201ENST00000390919 FAM157BP0CG42 384 aa3.08□□□□□ -1.92
RNU6-220P-201ENST00000390919 SETSIPP0DME0 302 aa3.08□□□□□ -1.92
RNU6-220P-201ENST00000390919 BMP2P12643 396 aa3.08□□□□□ -1.92
RNU6-220P-201ENST00000390919 GBP1P32455 592 aa3.08□□□□□ -1.92
RNU6-220P-201ENST00000390919 DDIT3P35638 169 aa3.08□□□□□ -1.92
RNU6-220P-201ENST00000390919 IARSP41252 1262 aaKnown RBP3.08□□□□□ -1.92
RNU6-220P-201ENST00000390919 ID4P47928 161 aa3.08□□□□□ -1.92
RNU6-220P-201ENST00000390919 KCNJ6P48051 423 aa3.08□□□□□ -1.92
RNU6-220P-201ENST00000390919 SARSP49591 514 aaKnown RBP3.08□□□□□ -1.92
RNU6-220P-201ENST00000390919 PMS1P54277 932 aaKnown RBP3.08□□□□□ -1.92
RNU6-220P-201ENST00000390919 SIK1P57059 783 aa3.08□□□□□ -1.92
RNU6-220P-201ENST00000390919 GEMIN4P57678 1058 aaKnown RBP3.08□□□□□ -1.92
RNU6-220P-201ENST00000390919 ZNF280AP59817 542 aaPredicted RBP3.08□□□□□ -1.92
RNU6-220P-201ENST00000390919 ETF1P62495 437 aaKnown RBP3.08□□□□□ -1.92
RNU6-220P-201ENST00000390919 GPLD1P80108 840 aa3.08□□□□□ -1.92
RNU6-220P-201ENST00000390919 ATP11AP98196 1134 aa3.08□□□□□ -1.92
RNU6-220P-201ENST00000390919 POU5F1Q01860 360 aaKnown RBP3.08□□□□□ -1.92
RNU6-220P-201ENST00000390919 TBC1D8BQ0IIM8 1120 aa3.08□□□□□ -1.92
RNU6-220P-201ENST00000390919 ZNF252P-AS1Q0IIN9 211 aa3.08□□□□□ -1.92
RNU6-220P-201ENST00000390919 LAMC2Q13753 1193 aa3.08□□□□□ -1.92
RNU6-220P-201ENST00000390919 IKBKEQ14164 716 aa3.08□□□□□ -1.92
RNU6-220P-201ENST00000390919 KCTD2Q14681 263 aa3.08□□□□□ -1.92
RNU6-220P-201ENST00000390919 GRM3Q14832 879 aa3.08□□□□□ -1.92
RNU6-220P-201ENST00000390919 PUM3Q15397 648 aaKnown RBP3.08□□□□□ -1.92
RNU6-220P-201ENST00000390919 PDCD2Q16342 344 aaPredicted RBP3.08□□□□□ -1.92
RNU6-220P-201ENST00000390919 TMEM240Q5SV17 173 aa3.08□□□□□ -1.92
RNU6-220P-201ENST00000390919 GPR158Q5T848 1215 aa3.08□□□□□ -1.92
RNU6-220P-201ENST00000390919 TDRD10Q5VZ19 366 aaKnown RBP3.08□□□□□ -1.92
RNU6-220P-201ENST00000390919 PGM2L1Q6PCE3 622 aa3.08□□□□□ -1.92
RNU6-220P-201ENST00000390919 TOGARAM2Q6ZUX3 1019 aa3.08□□□□□ -1.92
RNU6-220P-201ENST00000390919 MAMDC2Q7Z304 686 aaPredicted RBP3.08□□□□□ -1.92
RNU6-220P-201ENST00000390919 FGD2Q7Z6J4 655 aa3.08□□□□□ -1.92
RNU6-220P-201ENST00000390919 CATIPQ7Z7H3 387 aa3.08□□□□□ -1.92
RNU6-220P-201ENST00000390919 SRLQ86TD4 932 aa3.08□□□□□ -1.92
RNU6-220P-201ENST00000390919 ANKLE2Q86XL3 938 aa3.08□□□□□ -1.92
RNU6-220P-201ENST00000390919 KIF18BQ86Y91 864 aa3.08□□□□□ -1.92
RNU6-220P-201ENST00000390919 CCDC144CPQ8IYA2 1237 aa3.08□□□□□ -1.92
RNU6-220P-201ENST00000390919 LINC00528Q8N1L1 170 aa3.08□□□□□ -1.92
RNU6-220P-201ENST00000390919 CPA6Q8N4T0 437 aa3.08□□□□□ -1.92
RNU6-220P-201ENST00000390919 C1orf131Q8NDD1 294 aaKnown RBP3.08□□□□□ -1.92
RNU6-220P-201ENST00000390919 FAM13CQ8NE31 585 aa3.08□□□□□ -1.92
RNU6-220P-201ENST00000390919 GSTCDQ8NEC7 633 aa3.08□□□□□ -1.92
RNU6-220P-201ENST00000390919 PPHLN1Q8NEY8 458 aaKnown RBP3.08□□□□□ -1.92
RNU6-220P-201ENST00000390919 RNF217Q8TC41 542 aa3.08□□□□□ -1.92
RNU6-220P-201ENST00000390919 GPBAR1Q8TDU6 330 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms