RNA–Protein interactions for RNA: ENST00000383738.6

CSPG5-202, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSPG5, Length 4,161 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-202ENST00000383738 CERKLQ49MI3 558 aaPredicted RBP21.16■□□□□ 0.98
CSPG5-202ENST00000383738 VPS16Q9H269 839 aa21.16■□□□□ 0.98
CSPG5-202ENST00000383738 KCNH3Q9ULD8 1083 aa21.16■□□□□ 0.98
CSPG5-202ENST00000383738 RFX5P48382 616 aaPredicted RBP21.16■□□□□ 0.98
CSPG5-202ENST00000383738 LIG3P49916 1009 aa21.16■□□□□ 0.98
CSPG5-202ENST00000383738 INF2Q27J81 1249 aa21.15■□□□□ 0.98
CSPG5-202ENST00000383738 NSUN7Q8NE18 718 aaKnown RBP21.15■□□□□ 0.98
CSPG5-202ENST00000383738 TDRD3Q9H7E2 651 aaKnown RBP21.15■□□□□ 0.98
CSPG5-202ENST00000383738 NCOA3Q9Y6Q9 1424 aa21.15■□□□□ 0.98
CSPG5-202ENST00000383738 SNAP25P60880 206 aa21.15■□□□□ 0.98
CSPG5-202ENST00000383738 CCDC40Q4G0X9 1142 aa21.15■□□□□ 0.98
CSPG5-202ENST00000383738 TTC38Q5R3I4 469 aa21.15■□□□□ 0.98
CSPG5-202ENST00000383738 CCDC113Q9H0I3 377 aa21.15■□□□□ 0.98
CSPG5-202ENST00000383738 RBM28Q9NW13 759 aaKnown RBP21.15■□□□□ 0.98
CSPG5-202ENST00000383738 CLIC4Q9Y696 253 aa21.15■□□□□ 0.98
CSPG5-202ENST00000383738 SLIT1O75093 1534 aa21.15■□□□□ 0.98
CSPG5-202ENST00000383738 RILPL1Q5EBL4 403 aa21.15■□□□□ 0.98
CSPG5-202ENST00000383738 YEATS4O95619 227 aa21.14■□□□□ 0.98
CSPG5-202ENST00000383738 CACNA2D4Q7Z3S7 1137 aa21.14■□□□□ 0.98
CSPG5-202ENST00000383738 EXOC1Q9NV70 894 aa21.14■□□□□ 0.98
CSPG5-202ENST00000383738 SMCO2A6NFE2 343 aa21.14■□□□□ 0.97
CSPG5-202ENST00000383738 KRT79Q5XKE5 535 aa21.14■□□□□ 0.97
CSPG5-202ENST00000383738 BLZF1Q9H2G9 400 aa21.14■□□□□ 0.97
CSPG5-202ENST00000383738 MYCLP12524 364 aaPredicted RBP21.14■□□□□ 0.97
CSPG5-202ENST00000383738 MAATS1Q7Z4T9 603 aa21.14■□□□□ 0.97
CSPG5-202ENST00000383738 IGSF22Q8N9C0 903 aa21.14■□□□□ 0.97
CSPG5-202ENST00000383738 RRP15Q9Y3B9 282 aaKnown RBP21.14■□□□□ 0.97
CSPG5-202ENST00000383738 RNASE9P60153 205 aaKnown RBP21.13■□□□□ 0.97
CSPG5-202ENST00000383738 UBXN2AP68543 259 aa21.13■□□□□ 0.97
CSPG5-202ENST00000383738 STOX1Q6ZVD7 989 aa21.13■□□□□ 0.97
CSPG5-202ENST00000383738 SYCP3Q8IZU3 236 aa21.13■□□□□ 0.97
CSPG5-202ENST00000383738 FBXO18Q8NFZ0 1043 aa21.13■□□□□ 0.97
CSPG5-202ENST00000383738 ANKRD7Q92527 254 aa21.13■□□□□ 0.97
CSPG5-202ENST00000383738 NTSR2O95665 410 aa21.13■□□□□ 0.97
CSPG5-202ENST00000383738 MRPL12P52815 198 aaKnown RBP21.13■□□□□ 0.97
CSPG5-202ENST00000383738 R3HDM1Q15032 1099 aaKnown RBP21.13■□□□□ 0.97
CSPG5-202ENST00000383738 C3orf67Q6ZVT6 689 aa21.13■□□□□ 0.97
CSPG5-202ENST00000383738 CYB5R4Q7L1T6 521 aa21.13■□□□□ 0.97
CSPG5-202ENST00000383738 ATP8A2Q9NTI2 1148 aa21.13■□□□□ 0.97
CSPG5-202ENST00000383738 PPP2R2CQ9Y2T4 447 aa21.13■□□□□ 0.97
CSPG5-202ENST00000383738 SLFN14P0C7P3 912 aa21.13■□□□□ 0.97
CSPG5-202ENST00000383738 SYCP1Q15431 976 aa21.13■□□□□ 0.97
CSPG5-202ENST00000383738 SPA17Q15506 151 aa21.13■□□□□ 0.97
CSPG5-202ENST00000383738 EZH2Q15910 746 aaKnown RBP21.13■□□□□ 0.97
CSPG5-202ENST00000383738 DYMQ7RTS9 669 aa21.13■□□□□ 0.97
CSPG5-202ENST00000383738 TTLL6Q8N841 843 aa21.13■□□□□ 0.97
CSPG5-202ENST00000383738 TBC1D7Q9P0N9 293 aa21.13■□□□□ 0.97
CSPG5-202ENST00000383738 MYO1CO00159 1063 aa21.12■□□□□ 0.97
CSPG5-202ENST00000383738 TDRD12Q587J7 1177 aaKnown RBP21.12■□□□□ 0.97
CSPG5-202ENST00000383738 H7C1D1 291 aa21.12■□□□□ 0.97
CSPG5-202ENST00000383738 NPR1P16066 1061 aa21.12■□□□□ 0.97
CSPG5-202ENST00000383738 TOB2Q14106 344 aaPredicted RBP21.12■□□□□ 0.97
CSPG5-202ENST00000383738 CEP112Q8N8E3 955 aa21.12■□□□□ 0.97
CSPG5-202ENST00000383738 PICK1Q9NRD5 415 aa21.12■□□□□ 0.97
CSPG5-202ENST00000383738 CDHR2Q9BYE9 1310 aa21.12■□□□□ 0.97
CSPG5-202ENST00000383738 MACROD2A1Z1Q3 448 aa21.12■□□□□ 0.97
CSPG5-202ENST00000383738 FAN1Q9Y2M0 1017 aa21.12■□□□□ 0.97
CSPG5-202ENST00000383738 ICA1Q05084 483 aa21.11■□□□□ 0.97
CSPG5-202ENST00000383738 CLEC10AQ8IUN9 316 aa21.11■□□□□ 0.97
CSPG5-202ENST00000383738 RGS22Q8NE09 1264 aa21.11■□□□□ 0.97
CSPG5-202ENST00000383738 SLF1Q9BQI6 1058 aa21.11■□□□□ 0.97
CSPG5-202ENST00000383738 SERPINB13Q9UIV8 391 aa21.11■□□□□ 0.97
CSPG5-202ENST00000383738 MORC2Q9Y6X9 1032 aaPredicted RBP21.11■□□□□ 0.97
CSPG5-202ENST00000383738 ITSN1Q15811 1721 aa21.11■□□□□ 0.97
CSPG5-202ENST00000383738 ARID5AQ03989 594 aa21.11■□□□□ 0.97
CSPG5-202ENST00000383738 TXNRD3Q86VQ6 643 aa21.11■□□□□ 0.97
CSPG5-202ENST00000383738 NEDD4P46934 1319 aa21.11■□□□□ 0.97
CSPG5-202ENST00000383738 ARHGAP6O43182 974 aa21.11■□□□□ 0.97
CSPG5-202ENST00000383738 TRIM21P19474 475 aaKnown RBP21.11■□□□□ 0.97
CSPG5-202ENST00000383738 SUPT20HQ8NEM7 779 aa21.11■□□□□ 0.97
CSPG5-202ENST00000383738 MASTLQ96GX5 879 aa21.11■□□□□ 0.97
CSPG5-202ENST00000383738 PARD6BQ9BYG5 372 aa21.11■□□□□ 0.97
CSPG5-202ENST00000383738 PFKFB1P16118 471 aa21.11■□□□□ 0.97
CSPG5-202ENST00000383738 BARGINQ6ZT62 677 aa21.11■□□□□ 0.97
CSPG5-202ENST00000383738 ARHGEF10LQ9HCE6 1279 aa21.11■□□□□ 0.97
CSPG5-202ENST00000383738 SPATA31A6Q5VVP1 1343 aa21.11■□□□□ 0.97
CSPG5-202ENST00000383738 BAZ2BQ9UIF8 2168 aaKnown RBP21.1■□□□□ 0.97
CSPG5-202ENST00000383738 LONRF2Q1L5Z9 754 aa21.1■□□□□ 0.97
CSPG5-202ENST00000383738 ZBTB12Q9Y330 459 aaPredicted RBP21.1■□□□□ 0.97
CSPG5-202ENST00000383738 AKR1B15C9JRZ8 316 aaPredicted RBP21.1■□□□□ 0.97
CSPG5-202ENST00000383738 AMPD3Q01432 767 aa21.1■□□□□ 0.97
CSPG5-202ENST00000383738 TMEM232C9JQI7 657 aa21.1■□□□□ 0.97
CSPG5-202ENST00000383738 POTEB2H3BUK9 544 aa21.1■□□□□ 0.97
CSPG5-202ENST00000383738 PLEKHA8P1O95397 391 aa21.1■□□□□ 0.97
CSPG5-202ENST00000383738 CSF1RP07333 972 aa21.1■□□□□ 0.97
CSPG5-202ENST00000383738 OTUD6BQ8N6M0 293 aa21.1■□□□□ 0.97
CSPG5-202ENST00000383738 COA7Q96BR5 231 aa21.1■□□□□ 0.97
CSPG5-202ENST00000383738 IQUBQ8NA54 791 aa21.09■□□□□ 0.97
CSPG5-202ENST00000383738 IFT81Q8WYA0 676 aa21.09■□□□□ 0.97
CSPG5-202ENST00000383738 GOLGA6L7A0A1B0GV03 622 aa21.09■□□□□ 0.97
CSPG5-202ENST00000383738 NLRP12P59046 1061 aa21.09■□□□□ 0.97
CSPG5-202ENST00000383738 CNKSR2Q8WXI2 1034 aa21.09■□□□□ 0.97
CSPG5-202ENST00000383738 IMPACTQ9P2X3 320 aa21.09■□□□□ 0.97
CSPG5-202ENST00000383738 TBCAO75347 108 aaKnown RBP21.09■□□□□ 0.97
CSPG5-202ENST00000383738 NOSTRINQ8IVI9 506 aa21.09■□□□□ 0.97
CSPG5-202ENST00000383738 CARMIL3Q8ND23 1372 aa21.09■□□□□ 0.97
CSPG5-202ENST00000383738 GSG1L2A8MUP6 293 aa21.08■□□□□ 0.97
CSPG5-202ENST00000383738 NF2P35240 595 aa21.08■□□□□ 0.97
CSPG5-202ENST00000383738 PAFAH1B1P43034 410 aa21.08■□□□□ 0.97
CSPG5-202ENST00000383738 REXO1Q8N1G1 1221 aaKnown RBP21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms