RNA–Protein interactions for RNA: ENST00000376839.7

ACTN1-202, Transcript of actinin alpha 1, humanhuman

TSL 2 BASIC

Gene ACTN1, Length 2,824 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-202ENST00000376839 ARHGAP25P42331 645 aa14.95□□□□□ -0.02
ACTN1-202ENST00000376839 NLRP5P59047 1200 aa14.95□□□□□ -0.02
ACTN1-202ENST00000376839 PAK1Q13153 545 aa14.95□□□□□ -0.02
ACTN1-202ENST00000376839 BRD3Q15059 726 aa14.95□□□□□ -0.02
ACTN1-202ENST00000376839 JAKMIP3Q5VZ66 844 aa14.95□□□□□ -0.02
ACTN1-202ENST00000376839 NELFBQ8WX92 580 aa14.95□□□□□ -0.02
ACTN1-202ENST00000376839 RWDD2AQ9UIY3 292 aa14.95□□□□□ -0.02
ACTN1-202ENST00000376839 TTF2Q9UNY4 1162 aaKnown RBP14.95□□□□□ -0.02
ACTN1-202ENST00000376839 LRRC10BA6NIK2 292 aa14.94□□□□□ -0.02
ACTN1-202ENST00000376839 MAP2K7O14733 419 aa14.94□□□□□ -0.02
ACTN1-202ENST00000376839 ATP6V1AP38606 617 aa14.94□□□□□ -0.02
ACTN1-202ENST00000376839 CEP112Q8N8E3 955 aa14.94□□□□□ -0.02
ACTN1-202ENST00000376839 NUP88Q99567 741 aaPredicted RBP14.94□□□□□ -0.02
ACTN1-202ENST00000376839 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.94□□□□□ -0.02
ACTN1-202ENST00000376839 TAF1P21675 1872 aa14.94□□□□□ -0.02
ACTN1-202ENST00000376839 KCNJ18B7U540 433 aa14.94□□□□□ -0.02
ACTN1-202ENST00000376839 GTPBP6O43824 516 aaPredicted RBP14.94□□□□□ -0.02
ACTN1-202ENST00000376839 SCG2P13521 617 aa14.94□□□□□ -0.02
ACTN1-202ENST00000376839 KCNJ12Q14500 433 aa14.94□□□□□ -0.02
ACTN1-202ENST00000376839 TCP11X2Q5H9J9 407 aa14.94□□□□□ -0.02
ACTN1-202ENST00000376839 BEND6Q5SZJ8 279 aaPredicted RBP14.94□□□□□ -0.02
ACTN1-202ENST00000376839 TMTC1Q8IUR5 882 aa14.94□□□□□ -0.02
ACTN1-202ENST00000376839 CTCFLQ8NI51 663 aaPredicted RBP14.94□□□□□ -0.02
ACTN1-202ENST00000376839 SLF1Q9BQI6 1058 aa14.94□□□□□ -0.02
ACTN1-202ENST00000376839 SUGCTQ9HAC7 445 aa14.94□□□□□ -0.02
ACTN1-202ENST00000376839 DOT1LQ8TEK3 1739 aa14.93□□□□□ -0.02
ACTN1-202ENST00000376839 CYP2D6P10635 497 aa14.93□□□□□ -0.02
ACTN1-202ENST00000376839 ITPK1Q13572 414 aa14.93□□□□□ -0.02
ACTN1-202ENST00000376839 MSANTD4Q8NCY6 345 aa14.93□□□□□ -0.02
ACTN1-202ENST00000376839 ACSBG1Q96GR2 724 aa14.93□□□□□ -0.02
ACTN1-202ENST00000376839 GNL3LQ9NVN8 582 aaKnown RBP14.93□□□□□ -0.02
ACTN1-202ENST00000376839 DLEC1Q9Y238 1755 aa14.93□□□□□ -0.02
ACTN1-202ENST00000376839 RPN1P04843 607 aaKnown RBP14.93□□□□□ -0.02
ACTN1-202ENST00000376839 RHOXF2BP0C7M4 288 aa14.93□□□□□ -0.02
ACTN1-202ENST00000376839 KRT9P35527 623 aa14.93□□□□□ -0.02
ACTN1-202ENST00000376839 CHP1Q99653 195 aa14.93□□□□□ -0.02
ACTN1-202ENST00000376839 RHOXF2Q9BQY4 288 aa14.93□□□□□ -0.02
ACTN1-202ENST00000376839 RAB21Q9UL25 225 aa14.93□□□□□ -0.02
ACTN1-202ENST00000376839 TRIM49BA6NDI0 452 aa14.93□□□□□ -0.02
ACTN1-202ENST00000376839 KLRK1P26718 216 aa14.93□□□□□ -0.02
ACTN1-202ENST00000376839 PRCPP42785 496 aa14.93□□□□□ -0.02
ACTN1-202ENST00000376839 MCM6Q14566 821 aa14.93□□□□□ -0.02
ACTN1-202ENST00000376839 ZNF658Q5TYW1 1059 aaPredicted RBP14.93□□□□□ -0.02
ACTN1-202ENST00000376839 CYP26C1Q6V0L0 522 aa14.93□□□□□ -0.02
ACTN1-202ENST00000376839 NAPGQ99747 312 aaPredicted RBP14.93□□□□□ -0.02
ACTN1-202ENST00000376839 TRIM10Q9UDY6 481 aa14.93□□□□□ -0.02
ACTN1-202ENST00000376839 MYH13Q9UKX3 1938 aa14.92□□□□□ -0.02
ACTN1-202ENST00000376839 FAM205AQ6ZU69 1335 aa14.92□□□□□ -0.02
ACTN1-202ENST00000376839 IRF2BP1Q8IU81 584 aa14.92□□□□□ -0.02
ACTN1-202ENST00000376839 FAM84BQ96KN1 310 aaPredicted RBP14.92□□□□□ -0.02
ACTN1-202ENST00000376839 REXO2Q9Y3B8 237 aaKnown RBP14.92□□□□□ -0.02
ACTN1-202ENST00000376839 MYH14Q7Z406 1995 aaKnown RBP14.92□□□□□ -0.02
ACTN1-202ENST00000376839 USP5P45974 858 aa14.92□□□□□ -0.02
ACTN1-202ENST00000376839 SPAG1Q07617 926 aa14.92□□□□□ -0.02
ACTN1-202ENST00000376839 PFKFB3Q16875 520 aaPredicted RBP14.92□□□□□ -0.02
ACTN1-202ENST00000376839 SLC4A8Q2Y0W8 1093 aa14.92□□□□□ -0.02
ACTN1-202ENST00000376839 WWC2Q6AWC2 1192 aa14.92□□□□□ -0.02
ACTN1-202ENST00000376839 ANKRD18AQ8IVF6 992 aa14.92□□□□□ -0.02
ACTN1-202ENST00000376839 C4orf32Q8N8J7 132 aa14.92□□□□□ -0.02
ACTN1-202ENST00000376839 RASGRP4Q8TDF6 673 aa14.92□□□□□ -0.02
ACTN1-202ENST00000376839 HNRNPLLQ8WVV9 542 aaKnown RBP14.92□□□□□ -0.02
ACTN1-202ENST00000376839 PDE11AQ9HCR9 933 aa14.92□□□□□ -0.02
ACTN1-202ENST00000376839 ABCB6Q9NP58 842 aa14.92□□□□□ -0.02
ACTN1-202ENST00000376839 A0A1B0GUL6 1792 aa14.91□□□□□ -0.02
ACTN1-202ENST00000376839 LOC102724428A0A0B4J2F2 783 aa14.91□□□□□ -0.02
ACTN1-202ENST00000376839 TRAPPC10P48553 1259 aa14.91□□□□□ -0.02
ACTN1-202ENST00000376839 PMS1P54277 932 aaKnown RBP14.91□□□□□ -0.02
ACTN1-202ENST00000376839 SIK1P57059 783 aa14.91□□□□□ -0.02
ACTN1-202ENST00000376839 VSNL1P62760 191 aa14.91□□□□□ -0.02
ACTN1-202ENST00000376839 UBXN1Q04323 297 aa14.91□□□□□ -0.02
ACTN1-202ENST00000376839 UBE4AQ14139 1066 aa14.91□□□□□ -0.02
ACTN1-202ENST00000376839 ERFEQ4G0M1 354 aa14.91□□□□□ -0.02
ACTN1-202ENST00000376839 NOA1Q8NC60 698 aaKnown RBP14.91□□□□□ -0.02
ACTN1-202ENST00000376839 GPKOWQ92917 476 aaPredicted RBP eCLIP14.91□□□□□ -0.02
ACTN1-202ENST00000376839 DCP1AQ9NPI6 582 aaPredicted RBP14.91□□□□□ -0.02
ACTN1-202ENST00000376839 LAMB2P55268 1798 aa14.91□□□□□ -0.02
ACTN1-202ENST00000376839 ORC4O43929 436 aa14.91□□□□□ -0.02
ACTN1-202ENST00000376839 MECOMQ03112 1051 aa14.91□□□□□ -0.02
ACTN1-202ENST00000376839 CAVIN4Q5BKX8 364 aa14.91□□□□□ -0.02
ACTN1-202ENST00000376839 NSUN4Q96CB9 384 aaKnown RBP14.91□□□□□ -0.02
ACTN1-202ENST00000376839 TRERF1Q96PN7 1200 aa14.91□□□□□ -0.02
ACTN1-202ENST00000376839 PP2D1A8MPX8 630 aa14.9□□□□□ -0.02
ACTN1-202ENST00000376839 PCP11498 1178 aaKnown RBP14.9□□□□□ -0.02
ACTN1-202ENST00000376839 NCAPH2Q6IBW4 605 aa14.9□□□□□ -0.02
ACTN1-202ENST00000376839 TXLNBQ8N3L3 684 aa14.9□□□□□ -0.02
ACTN1-202ENST00000376839 ADAM21Q9UKJ8 722 aa14.9□□□□□ -0.02
ACTN1-202ENST00000376839 MINPP1Q9UNW1 487 aa14.9□□□□□ -0.02
ACTN1-202ENST00000376839 TFR2Q9UP52 801 aa14.9□□□□□ -0.02
ACTN1-202ENST00000376839 TTC26A0AVF1 554 aa14.9□□□□□ -0.02
ACTN1-202ENST00000376839 N4BP1O75113 896 aaKnown RBP14.9□□□□□ -0.02
ACTN1-202ENST00000376839 PARP1P09874 1014 aaKnown RBP14.9□□□□□ -0.02
ACTN1-202ENST00000376839 STAT6P42226 847 aa14.9□□□□□ -0.02
ACTN1-202ENST00000376839 AMPD2Q01433 879 aa14.9□□□□□ -0.02
ACTN1-202ENST00000376839 TUBB2AQ13885 445 aa14.9□□□□□ -0.02
ACTN1-202ENST00000376839 NAALADL2Q58DX5 795 aa14.9□□□□□ -0.02
ACTN1-202ENST00000376839 RCSD1Q6JBY9 416 aa14.9□□□□□ -0.02
ACTN1-202ENST00000376839 ANKRD20A12PQ8NF67 263 aa14.9□□□□□ -0.02
ACTN1-202ENST00000376839 TUBB2BQ9BVA1 445 aa14.9□□□□□ -0.02
ACTN1-202ENST00000376839 L1RE1Q9UN81 338 aa14.9□□□□□ -0.02
ACTN1-202ENST00000376839 COL22A1Q8NFW1 1626 aaPredicted RBP14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms