RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 TBX22Q9Y458 520 aa17.31■□□□□ 0.36
NUCKS1-201ENST00000367142 PCK1P35558 622 aa17.3■□□□□ 0.36
NUCKS1-201ENST00000367142 TFDP1Q14186 410 aa17.3■□□□□ 0.36
NUCKS1-201ENST00000367142 RBBP5Q15291 538 aaKnown RBP17.3■□□□□ 0.36
NUCKS1-201ENST00000367142 ABI1Q8IZP0 508 aa17.3■□□□□ 0.36
NUCKS1-201ENST00000367142 KRT12Q99456 494 aa17.3■□□□□ 0.36
NUCKS1-201ENST00000367142 RAB17Q9H0T7 212 aa17.3■□□□□ 0.36
NUCKS1-201ENST00000367142 S100BP04271 92 aaPredicted RBP17.3■□□□□ 0.36
NUCKS1-201ENST00000367142 XPAP23025 273 aaPredicted RBP17.3■□□□□ 0.36
NUCKS1-201ENST00000367142 CYP2J2P51589 502 aa17.3■□□□□ 0.36
NUCKS1-201ENST00000367142 CCNA1P78396 465 aa17.3■□□□□ 0.36
NUCKS1-201ENST00000367142 LONRF2Q1L5Z9 754 aa17.3■□□□□ 0.36
NUCKS1-201ENST00000367142 KRT40Q6A162 431 aa17.3■□□□□ 0.36
NUCKS1-201ENST00000367142 LSM14BQ9BX40 385 aaKnown RBP17.3■□□□□ 0.36
NUCKS1-201ENST00000367142 RDH13Q8NBN7 331 aa17.3■□□□□ 0.36
NUCKS1-201ENST00000367142 SEPT10Q9P0V9 454 aa17.3■□□□□ 0.36
NUCKS1-201ENST00000367142 AMFRQ9UKV5 643 aa17.3■□□□□ 0.36
NUCKS1-201ENST00000367142 ZHX1Q9UKY1 873 aaPredicted RBP17.3■□□□□ 0.36
NUCKS1-201ENST00000367142 K7ENM7 598 aa17.3■□□□□ 0.36
NUCKS1-201ENST00000367142 CPA1P15085 419 aa17.3■□□□□ 0.36
NUCKS1-201ENST00000367142 PHLDB2Q86SQ0 1253 aa17.3■□□□□ 0.36
NUCKS1-201ENST00000367142 HAUS8Q9BT25 410 aa17.3■□□□□ 0.36
NUCKS1-201ENST00000367142 RIC8AQ9NPQ8 531 aa17.3■□□□□ 0.36
NUCKS1-201ENST00000367142 CTAGE3PQ8IX95 158 aa17.3■□□□□ 0.36
NUCKS1-201ENST00000367142 RPS8P62241 208 aaKnown RBP17.29■□□□□ 0.36
NUCKS1-201ENST00000367142 RILPQ96NA2 401 aa17.29■□□□□ 0.36
NUCKS1-201ENST00000367142 LRFN2Q9ULH4 789 aa17.29■□□□□ 0.36
NUCKS1-201ENST00000367142 XPOTO43592 962 aaKnown RBP17.29■□□□□ 0.36
NUCKS1-201ENST00000367142 XRCC5P13010 732 aaKnown RBP17.29■□□□□ 0.36
NUCKS1-201ENST00000367142 ZAP70P43403 619 aa17.29■□□□□ 0.36
NUCKS1-201ENST00000367142 GBP6Q6ZN66 633 aa17.29■□□□□ 0.36
NUCKS1-201ENST00000367142 DNAJC10Q8IXB1 793 aa17.29■□□□□ 0.36
NUCKS1-201ENST00000367142 HVCN1Q96D96 273 aa17.29■□□□□ 0.36
NUCKS1-201ENST00000367142 PSTPIP2Q9H939 334 aa17.29■□□□□ 0.36
NUCKS1-201ENST00000367142 KRT26Q7Z3Y9 468 aa17.29■□□□□ 0.36
NUCKS1-201ENST00000367142 ZBTB40Q9NUA8 1239 aa17.29■□□□□ 0.36
NUCKS1-201ENST00000367142 TLR3O15455 904 aaKnown RBP17.29■□□□□ 0.36
NUCKS1-201ENST00000367142 OSBPP22059 807 aa17.29■□□□□ 0.36
NUCKS1-201ENST00000367142 TSNAXIP1Q2TAA8 658 aa17.29■□□□□ 0.36
NUCKS1-201ENST00000367142 HS1BP3Q53T59 392 aa17.29■□□□□ 0.36
NUCKS1-201ENST00000367142 U2AF1L4Q8WU68 220 aaKnown RBP17.29■□□□□ 0.36
NUCKS1-201ENST00000367142 SORBS3O60504 671 aa17.29■□□□□ 0.36
NUCKS1-201ENST00000367142 TMEM191BP0C7N4 346 aa17.29■□□□□ 0.36
NUCKS1-201ENST00000367142 DENND2CQ68D51 928 aa17.29■□□□□ 0.36
NUCKS1-201ENST00000367142 ZBTB9Q96C00 473 aa17.29■□□□□ 0.36
NUCKS1-201ENST00000367142 PDE6CP51160 858 aa17.28■□□□□ 0.36
NUCKS1-201ENST00000367142 KLHDC4Q8TBB5 520 aa17.28■□□□□ 0.36
NUCKS1-201ENST00000367142 CNKSR1Q969H4 720 aa17.28■□□□□ 0.36
NUCKS1-201ENST00000367142 ERO1AQ96HE7 468 aa17.28■□□□□ 0.36
NUCKS1-201ENST00000367142 A0A1W2PP64 1363 aa17.28■□□□□ 0.36
NUCKS1-201ENST00000367142 KDRP35968 1356 aa17.28■□□□□ 0.36
NUCKS1-201ENST00000367142 DMP1Q13316 513 aaPredicted RBP17.28■□□□□ 0.36
NUCKS1-201ENST00000367142 PRR16Q569H4 304 aa17.28■□□□□ 0.36
NUCKS1-201ENST00000367142 ANKRD20A3Q5VUR7 823 aa17.28■□□□□ 0.36
NUCKS1-201ENST00000367142 PHKBQ93100 1093 aa17.28■□□□□ 0.36
NUCKS1-201ENST00000367142 PTPREP23469 700 aa17.28■□□□□ 0.36
NUCKS1-201ENST00000367142 PRPSAP1Q14558 356 aa17.28■□□□□ 0.36
NUCKS1-201ENST00000367142 KCTD2Q14681 263 aa17.28■□□□□ 0.36
NUCKS1-201ENST00000367142 CERKLQ49MI3 558 aaPredicted RBP17.28■□□□□ 0.36
NUCKS1-201ENST00000367142 BBS5Q8N3I7 341 aa17.28■□□□□ 0.36
NUCKS1-201ENST00000367142 SUCLG2Q96I99 432 aa17.28■□□□□ 0.36
NUCKS1-201ENST00000367142 STAT1P42224 750 aa17.28■□□□□ 0.36
NUCKS1-201ENST00000367142 PHACTR3Q96KR7 559 aa17.28■□□□□ 0.36
NUCKS1-201ENST00000367142 KCNJ14Q9UNX9 436 aa17.28■□□□□ 0.36
NUCKS1-201ENST00000367142 SNX14Q9Y5W7 946 aa17.28■□□□□ 0.36
NUCKS1-201ENST00000367142 ZMYM3Q14202 1370 aa17.28■□□□□ 0.36
NUCKS1-201ENST00000367142 ZNF449Q6P9G9 518 aa17.28■□□□□ 0.36
NUCKS1-201ENST00000367142 CCDC170Q8IYT3 715 aa17.28■□□□□ 0.36
NUCKS1-201ENST00000367142 SKA2Q8WVK7 121 aaPredicted RBP17.28■□□□□ 0.36
NUCKS1-201ENST00000367142 NDUFAB1O14561 156 aa17.28■□□□□ 0.36
NUCKS1-201ENST00000367142 ZNF202O95125 648 aa17.28■□□□□ 0.36
NUCKS1-201ENST00000367142 POLGP54098 1239 aaPredicted RBP17.28■□□□□ 0.36
NUCKS1-201ENST00000367142 SUGCTQ9HAC7 445 aa17.28■□□□□ 0.36
NUCKS1-201ENST00000367142 DPP9Q86TI2 863 aa17.27■□□□□ 0.36
NUCKS1-201ENST00000367142 IMPACTQ9P2X3 320 aa17.27■□□□□ 0.36
NUCKS1-201ENST00000367142 CTSWP56202 376 aa17.27■□□□□ 0.36
NUCKS1-201ENST00000367142 RRAGAQ7L523 313 aa17.27■□□□□ 0.36
NUCKS1-201ENST00000367142 NOP9Q86U38 636 aaKnown RBP17.27■□□□□ 0.36
NUCKS1-201ENST00000367142 FBXO11Q86XK2 927 aa17.27■□□□□ 0.36
NUCKS1-201ENST00000367142 SCYL1Q96KG9 808 aa17.27■□□□□ 0.36
NUCKS1-201ENST00000367142 AP5M1Q9H0R1 490 aa17.27■□□□□ 0.36
NUCKS1-201ENST00000367142 BLZF1Q9H2G9 400 aa17.27■□□□□ 0.36
NUCKS1-201ENST00000367142 MAP3K21Q5TCX8 1036 aa17.27■□□□□ 0.36
NUCKS1-201ENST00000367142 MYOCDQ8IZQ8 938 aa17.27■□□□□ 0.36
NUCKS1-201ENST00000367142 NME8Q8N427 588 aa17.27■□□□□ 0.36
NUCKS1-201ENST00000367142 GSTA1P08263 222 aa17.27■□□□□ 0.35
NUCKS1-201ENST00000367142 GSTA2P09210 222 aa17.27■□□□□ 0.35
NUCKS1-201ENST00000367142 TROVE2P10155 538 aaKnown RBP eCLIP17.27■□□□□ 0.35
NUCKS1-201ENST00000367142 GBP7Q8N8V2 638 aaPredicted RBP17.27■□□□□ 0.35
NUCKS1-201ENST00000367142 VCX3AQ9NNX9 186 aa17.27■□□□□ 0.35
NUCKS1-201ENST00000367142 VPS54Q9P1Q0 977 aa17.27■□□□□ 0.35
NUCKS1-201ENST00000367142 FRMPD2Q68DX3 1309 aaPredicted RBP17.27■□□□□ 0.35
NUCKS1-201ENST00000367142 ERCC3P19447 782 aa17.26■□□□□ 0.35
NUCKS1-201ENST00000367142 RINT1Q6NUQ1 792 aa17.26■□□□□ 0.35
NUCKS1-201ENST00000367142 ANAPC5Q9UJX4 755 aa17.26■□□□□ 0.35
NUCKS1-201ENST00000367142 GPATCH8Q9UKJ3 1502 aaKnown RBP17.26■□□□□ 0.35
NUCKS1-201ENST00000367142 ERVV-2B6SEH9 535 aa17.26■□□□□ 0.35
NUCKS1-201ENST00000367142 IGBP1P78318 339 aa17.26■□□□□ 0.35
NUCKS1-201ENST00000367142 G2E3Q7L622 706 aa17.26■□□□□ 0.35
NUCKS1-201ENST00000367142 METTL23Q86XA0 190 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms