RNA–Protein interactions for RNA: ENST00000324106.8

CD28-201, Transcript of CD28 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD28, Length 4,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-201ENST00000324106 FMNL1O95466 1100 aaPredicted RBP9.96□□□□□ -0.82
CD28-201ENST00000324106 TUBBP07437 444 aa9.96□□□□□ -0.82
CD28-201ENST00000324106 BMP3P12645 472 aa9.96□□□□□ -0.82
CD28-201ENST00000324106 DCUN1D2Q6PH85 259 aa9.96□□□□□ -0.82
CD28-201ENST00000324106 SDR42E1Q8WUS8 393 aa9.96□□□□□ -0.82
CD28-201ENST00000324106 SLC7A3Q8WY07 619 aa9.96□□□□□ -0.82
CD28-201ENST00000324106 ZMYND15Q9H091 742 aa9.96□□□□□ -0.82
CD28-201ENST00000324106 CARMIL3Q8ND23 1372 aa9.96□□□□□ -0.82
CD28-201ENST00000324106 PRR36Q9H6K5 1346 aa9.95□□□□□ -0.82
CD28-201ENST00000324106 TMEM110-MUSTN1A8MSY1 372 aa9.95□□□□□ -0.82
CD28-201ENST00000324106 SCG2P13521 617 aa9.95□□□□□ -0.82
CD28-201ENST00000324106 PRR16Q569H4 304 aa9.95□□□□□ -0.82
CD28-201ENST00000324106 HSP90AA4PQ58FG1 418 aa9.95□□□□□ -0.82
CD28-201ENST00000324106 CCDC94Q9BW85 323 aaPredicted RBP9.95□□□□□ -0.82
CD28-201ENST00000324106 WDR11Q9BZH6 1224 aa9.95□□□□□ -0.82
CD28-201ENST00000324106 SUGCTQ9HAC7 445 aa9.95□□□□□ -0.82
CD28-201ENST00000324106 RNF216Q9NWF9 866 aaPredicted RBP9.95□□□□□ -0.82
CD28-201ENST00000324106 CGNQ9P2M7 1197 aaKnown RBP9.95□□□□□ -0.82
CD28-201ENST00000324106 COL4A3BPQ9Y5P4 624 aa9.95□□□□□ -0.82
CD28-201ENST00000324106 POLGP54098 1239 aaPredicted RBP9.95□□□□□ -0.82
CD28-201ENST00000324106 TNNC1P63316 161 aa9.95□□□□□ -0.82
CD28-201ENST00000324106 C6orf163Q5TEZ5 329 aa9.95□□□□□ -0.82
CD28-201ENST00000324106 TICAM2Q86XR7 235 aa9.95□□□□□ -0.82
CD28-201ENST00000324106 NACC1Q96RE7 527 aa9.95□□□□□ -0.82
CD28-201ENST00000324106 HESX1Q9UBX0 185 aa9.95□□□□□ -0.82
CD28-201ENST00000324106 SRP68Q9UHB9 627 aaKnown RBP9.95□□□□□ -0.82
CD28-201ENST00000324106 NUB1Q9Y5A7 615 aa9.95□□□□□ -0.82
CD28-201ENST00000324106 ADGBQ8N7X0 1667 aa9.95□□□□□ -0.82
CD28-201ENST00000324106 KDM2BQ8NHM5 1336 aa9.95□□□□□ -0.82
CD28-201ENST00000324106 SKILP12757 684 aa9.95□□□□□ -0.82
CD28-201ENST00000324106 GCFC2P16383 781 aaKnown RBP9.95□□□□□ -0.82
CD28-201ENST00000324106 ERCC5P28715 1186 aaPredicted RBP9.95□□□□□ -0.82
CD28-201ENST00000324106 PAK1Q13153 545 aa9.95□□□□□ -0.82
CD28-201ENST00000324106 AOC3Q16853 763 aa9.95□□□□□ -0.82
CD28-201ENST00000324106 CFAP58Q5T655 872 aa9.95□□□□□ -0.82
CD28-201ENST00000324106 C16orf45Q96MC5 204 aaPredicted RBP9.95□□□□□ -0.82
CD28-201ENST00000324106 MYL10Q9BUA6 226 aa9.95□□□□□ -0.82
CD28-201ENST00000324106 SRRTQ9BXP5 876 aaKnown RBP9.95□□□□□ -0.82
CD28-201ENST00000324106 NCOA5Q9HCD5 579 aaKnown RBP9.95□□□□□ -0.82
CD28-201ENST00000324106 NOC2LQ9Y3T9 749 aaKnown RBP9.95□□□□□ -0.82
CD28-201ENST00000324106 PAXBP1Q9Y5B6 917 aa9.95□□□□□ -0.82
CD28-201ENST00000324106 VPS72Q15906 364 aa9.95□□□□□ -0.82
CD28-201ENST00000324106 COA7Q96BR5 231 aa9.95□□□□□ -0.82
CD28-201ENST00000324106 VPS54Q9P1Q0 977 aa9.95□□□□□ -0.82
CD28-201ENST00000324106 CTAGE9A4FU28 777 aa9.94□□□□□ -0.82
CD28-201ENST00000324106 E7EVH7 732 aa9.94□□□□□ -0.82
CD28-201ENST00000324106 HSF2BPO75031 334 aa9.94□□□□□ -0.82
CD28-201ENST00000324106 KIF11P52732 1056 aa9.94□□□□□ -0.82
CD28-201ENST00000324106 UTP14CQ5TAP6 766 aaKnown RBP9.94□□□□□ -0.82
CD28-201ENST00000324106 GSDMBQ8TAX9 411 aa9.94□□□□□ -0.82
CD28-201ENST00000324106 SLC16A10Q8TF71 515 aa9.94□□□□□ -0.82
CD28-201ENST00000324106 PHKBQ93100 1093 aa9.94□□□□□ -0.82
CD28-201ENST00000324106 TTC14Q96N46 770 aa9.94□□□□□ -0.82
CD28-201ENST00000324106 ZHX1Q9UKY1 873 aaPredicted RBP9.94□□□□□ -0.82
CD28-201ENST00000324106 POLR2DO15514 142 aaKnown RBP9.94□□□□□ -0.82
CD28-201ENST00000324106 POSTNQ15063 836 aa9.94□□□□□ -0.82
CD28-201ENST00000324106 SSH2Q76I76 1423 aa9.94□□□□□ -0.82
CD28-201ENST00000324106 KDM5AP29375 1690 aaKnown RBP9.94□□□□□ -0.82
CD28-201ENST00000324106 RPAP1Q9BWH6 1393 aaPredicted RBP9.94□□□□□ -0.82
CD28-201ENST00000324106 MED23Q9ULK4 1368 aa9.94□□□□□ -0.82
CD28-201ENST00000324106 UQCRHLA0A096LP55 91 aa9.94□□□□□ -0.82
CD28-201ENST00000324106 A0A1B0GVL5 298 aa9.94□□□□□ -0.82
CD28-201ENST00000324106 UQCRHP07919 91 aa9.94□□□□□ -0.82
CD28-201ENST00000324106 HSPD1P10809 573 aaKnown RBP9.94□□□□□ -0.82
CD28-201ENST00000324106 DMP1Q13316 513 aaPredicted RBP9.94□□□□□ -0.82
CD28-201ENST00000324106 POLA2Q14181 598 aa9.94□□□□□ -0.82
CD28-201ENST00000324106 ZSCAN23Q3MJ62 389 aa9.94□□□□□ -0.82
CD28-201ENST00000324106 FAM102BQ5T8I3 360 aa9.94□□□□□ -0.82
CD28-201ENST00000324106 GPR161Q8N6U8 529 aaKnown RBP9.94□□□□□ -0.82
CD28-201ENST00000324106 ZNF341Q9BYN7 854 aa9.94□□□□□ -0.82
CD28-201ENST00000324106 KRT9P35527 623 aa9.94□□□□□ -0.82
CD28-201ENST00000324106 COPB2P35606 906 aa9.94□□□□□ -0.82
CD28-201ENST00000324106 STAT2P52630 851 aa9.94□□□□□ -0.82
CD28-201ENST00000324106 CLUL1Q15846 466 aa9.94□□□□□ -0.82
CD28-201ENST00000324106 SLC9C1Q4G0N8 1177 aa9.94□□□□□ -0.82
CD28-201ENST00000324106 CTR9Q6PD62 1173 aa9.94□□□□□ -0.82
CD28-201ENST00000324106 BRIP1Q9BX63 1249 aa9.94□□□□□ -0.82
CD28-201ENST00000324106 ODF2LQ9ULJ1 636 aa9.94□□□□□ -0.82
CD28-201ENST00000324106 SOS2Q07890 1332 aaPredicted RBP9.93□□□□□ -0.82
CD28-201ENST00000324106 OR52Z1P0C646 297 aa9.93□□□□□ -0.82
CD28-201ENST00000324106 TMEM191BP0C7N4 346 aa9.93□□□□□ -0.82
CD28-201ENST00000324106 ZSCAN20P17040 1043 aaPredicted RBP9.93□□□□□ -0.82
CD28-201ENST00000324106 HSPA4P34932 840 aa9.93□□□□□ -0.82
CD28-201ENST00000324106 PPP1R7Q15435 360 aa9.93□□□□□ -0.82
CD28-201ENST00000324106 FAM178BQ8IXR5 827 aa9.93□□□□□ -0.82
CD28-201ENST00000324106 UBL4BQ8N7F7 174 aa9.93□□□□□ -0.82
CD28-201ENST00000324106 ZNF277Q9NRM2 450 aaPredicted RBP9.93□□□□□ -0.82
CD28-201ENST00000324106 ABCC3O15438 1527 aa9.93□□□□□ -0.82
CD28-201ENST00000324106 SPATA31E1Q6ZUB1 1445 aa9.93□□□□□ -0.82
CD28-201ENST00000324106 SYNMO15061 1565 aa9.93□□□□□ -0.82
CD28-201ENST00000324106 PREX1Q8TCU6 1659 aa9.93□□□□□ -0.82
CD28-201ENST00000324106 POLR2BP30876 1174 aaKnown RBP9.93□□□□□ -0.82
CD28-201ENST00000324106 ASIC2Q16515 512 aa9.93□□□□□ -0.82
CD28-201ENST00000324106 RC3H1Q5TC82 1133 aaKnown RBP9.93□□□□□ -0.82
CD28-201ENST00000324106 TMEM179Q6ZVK1 233 aa9.93□□□□□ -0.82
CD28-201ENST00000324106 SEC31BQ9NQW1 1179 aa9.93□□□□□ -0.82
CD28-201ENST00000324106 FRMPD2Q68DX3 1309 aaPredicted RBP9.93□□□□□ -0.82
CD28-201ENST00000324106 FGAP02671 866 aa9.93□□□□□ -0.82
CD28-201ENST00000324106 NDUFB9Q9Y6M9 179 aa9.93□□□□□ -0.82
CD28-201ENST00000324106 IGSF3O75054 1194 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms