RNA–Protein interactions for RNA: ENST00000308639.13

RELA-201, Transcript of RELA proto-oncogene, NF-kB subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RELA, Length 2,681 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RELA-201ENST00000308639 RCSD1Q6JBY9 416 aa23.62■■□□□ 1.37
RELA-201ENST00000308639 PDXDC2PQ6P474 469 aa23.62■■□□□ 1.37
RELA-201ENST00000308639 FBXO33Q7Z6M2 555 aa23.62■■□□□ 1.37
RELA-201ENST00000308639 DYNLL2Q96FJ2 89 aa23.62■■□□□ 1.37
RELA-201ENST00000308639 PLIN2Q99541 437 aa23.62■■□□□ 1.37
RELA-201ENST00000308639 SRRTQ9BXP5 876 aaKnown RBP23.62■■□□□ 1.37
RELA-201ENST00000308639 MYH8P13535 1937 aa23.61■■□□□ 1.37
RELA-201ENST00000308639 MFAP3LO75121 409 aa23.61■■□□□ 1.37
RELA-201ENST00000308639 SASH3O75995 380 aa23.61■■□□□ 1.37
RELA-201ENST00000308639 KRT31Q15323 416 aa23.61■■□□□ 1.37
RELA-201ENST00000308639 CALM1P0DP23 149 aa23.61■■□□□ 1.37
RELA-201ENST00000308639 CALM2P0DP24 149 aa23.61■■□□□ 1.37
RELA-201ENST00000308639 CALM3P0DP25 149 aa23.61■■□□□ 1.37
RELA-201ENST00000308639 TYW1BQ6NUM6 668 aa23.61■■□□□ 1.37
RELA-201ENST00000308639 PANX2Q96RD6 677 aa23.61■■□□□ 1.37
RELA-201ENST00000308639 SCN7AQ01118 1682 aa23.6■■□□□ 1.37
RELA-201ENST00000308639 RASGRP2Q7LDG7 609 aa23.6■■□□□ 1.37
RELA-201ENST00000308639 CCDC34Q96HJ3 373 aa23.6■■□□□ 1.37
RELA-201ENST00000308639 MCM9Q9NXL9 1143 aa23.6■■□□□ 1.37
RELA-201ENST00000308639 ERICH4A6NGS2 130 aa23.6■■□□□ 1.37
RELA-201ENST00000308639 PUF60Q9UHX1 559 aaKnown RBP23.6■■□□□ 1.37
RELA-201ENST00000308639 CASZ1Q86V15 1759 aa23.6■■□□□ 1.37
RELA-201ENST00000308639 GOLGA6L9A6NEM1 432 aa23.59■■□□□ 1.37
RELA-201ENST00000308639 PFKFB3Q16875 520 aaPredicted RBP23.59■■□□□ 1.37
RELA-201ENST00000308639 IQUBQ8NA54 791 aa23.59■■□□□ 1.37
RELA-201ENST00000308639 CRNKL1Q9BZJ0 848 aaKnown RBP23.59■■□□□ 1.37
RELA-201ENST00000308639 TRIM49BA6NDI0 452 aa23.59■■□□□ 1.37
RELA-201ENST00000308639 N4BP3O15049 544 aa23.59■■□□□ 1.37
RELA-201ENST00000308639 POLR3GO15318 223 aaPredicted RBP23.59■■□□□ 1.37
RELA-201ENST00000308639 HIBADHP31937 336 aaKnown RBP23.59■■□□□ 1.37
RELA-201ENST00000308639 ARGLU1Q9NWB6 273 aaPredicted RBP23.59■■□□□ 1.37
RELA-201ENST00000308639 RPS8P62241 208 aaKnown RBP23.58■■□□□ 1.37
RELA-201ENST00000308639 NOL10Q9BSC4 688 aaKnown RBP23.58■■□□□ 1.37
RELA-201ENST00000308639 ORC4O43929 436 aa23.58■■□□□ 1.37
RELA-201ENST00000308639 ERVK-24P63145 666 aa23.58■■□□□ 1.37
RELA-201ENST00000308639 NELFBQ8WX92 580 aa23.58■■□□□ 1.37
RELA-201ENST00000308639 EEF2KMTQ96G04 330 aa23.58■■□□□ 1.37
RELA-201ENST00000308639 PARD6BQ9BYG5 372 aa23.58■■□□□ 1.37
RELA-201ENST00000308639 IL17RBQ9NRM6 502 aa23.58■■□□□ 1.37
RELA-201ENST00000308639 BMP15O95972 392 aa23.57■■□□□ 1.36
RELA-201ENST00000308639 ZNF569Q5MCW4 686 aa23.57■■□□□ 1.36
RELA-201ENST00000308639 RSRC2Q7L4I2 434 aaKnown RBP23.57■■□□□ 1.36
RELA-201ENST00000308639 CPVLQ9H3G5 476 aa23.57■■□□□ 1.36
RELA-201ENST00000308639 USP17L3A6NCW0 530 aa23.57■■□□□ 1.36
RELA-201ENST00000308639 USP17L4A6NCW7 530 aa23.57■■□□□ 1.36
RELA-201ENST00000308639 TFAP4Q01664 338 aa23.57■■□□□ 1.36
RELA-201ENST00000308639 SLC35G1Q2M3R5 365 aa23.57■■□□□ 1.36
RELA-201ENST00000308639 FILIP1LQ4L180 1135 aa23.57■■□□□ 1.36
RELA-201ENST00000308639 USP17L1Q7RTZ2 530 aa23.57■■□□□ 1.36
RELA-201ENST00000308639 SLC44A5Q8NCS7 719 aa23.57■■□□□ 1.36
RELA-201ENST00000308639 DLEC1Q9Y238 1755 aa23.57■■□□□ 1.36
RELA-201ENST00000308639 ZCCHC17Q9NP64 241 aaKnown RBP23.56■■□□□ 1.36
RELA-201ENST00000308639 RREB1Q92766 1687 aa23.56■■□□□ 1.36
RELA-201ENST00000308639 TBC1D8O95759 1140 aa23.56■■□□□ 1.36
RELA-201ENST00000308639 PRCPP42785 496 aa23.56■■□□□ 1.36
RELA-201ENST00000308639 GRIK5Q16478 980 aa23.56■■□□□ 1.36
RELA-201ENST00000308639 CC2D1AQ6P1N0 951 aaPredicted RBP23.56■■□□□ 1.36
RELA-201ENST00000308639 CLEC4GQ6UXB4 293 aa23.56■■□□□ 1.36
RELA-201ENST00000308639 GPR101Q96P66 508 aaPredicted RBP23.56■■□□□ 1.36
RELA-201ENST00000308639 TMEM60Q9H2L4 133 aa23.56■■□□□ 1.36
RELA-201ENST00000308639 ROBO1Q9Y6N7 1651 aa23.55■■□□□ 1.36
RELA-201ENST00000308639 RPN1P04843 607 aaKnown RBP23.55■■□□□ 1.36
RELA-201ENST00000308639 COPB1P53618 953 aaKnown RBP23.55■■□□□ 1.36
RELA-201ENST00000308639 PMS1P54277 932 aaKnown RBP23.55■■□□□ 1.36
RELA-201ENST00000308639 PAK1Q13153 545 aa23.55■■□□□ 1.36
RELA-201ENST00000308639 C4orf32Q8N8J7 132 aa23.55■■□□□ 1.36
RELA-201ENST00000308639 VGLL3A8MV65 326 aa23.55■■□□□ 1.36
RELA-201ENST00000308639 DIXDC1Q155Q3 683 aa23.55■■□□□ 1.36
RELA-201ENST00000308639 AMIGO3Q86WK7 504 aa23.55■■□□□ 1.36
RELA-201ENST00000308639 BLIDQ8IZY5 108 aa23.55■■□□□ 1.36
RELA-201ENST00000308639 CTAGE1Q96RT6 745 aa23.55■■□□□ 1.36
RELA-201ENST00000308639 NUP88Q99567 741 aaPredicted RBP23.55■■□□□ 1.36
RELA-201ENST00000308639 KAT14Q9H8E8 782 aa23.55■■□□□ 1.36
RELA-201ENST00000308639 KCNJ18B7U540 433 aa23.54■■□□□ 1.36
RELA-201ENST00000308639 GTPBP6O43824 516 aaPredicted RBP23.54■■□□□ 1.36
RELA-201ENST00000308639 KCNJ12Q14500 433 aa23.54■■□□□ 1.36
RELA-201ENST00000308639 SLC35F6Q8N357 371 aa23.54■■□□□ 1.36
RELA-201ENST00000308639 LRRC15Q8TF66 581 aa23.54■■□□□ 1.36
RELA-201ENST00000308639 GOLGA8HP0CJ92 632 aa23.54■■□□□ 1.36
RELA-201ENST00000308639 DZIP1Q86YF9 867 aaKnown RBP23.54■■□□□ 1.36
RELA-201ENST00000308639 PNMA1Q8ND90 353 aa23.54■■□□□ 1.36
RELA-201ENST00000308639 CDCA7Q9BWT1 371 aaPredicted RBP23.54■■□□□ 1.36
RELA-201ENST00000308639 TFR2Q9UP52 801 aa23.54■■□□□ 1.36
RELA-201ENST00000308639 STAT6P42226 847 aa23.53■■□□□ 1.36
RELA-201ENST00000308639 TCP11X2Q5H9J9 407 aa23.53■■□□□ 1.36
RELA-201ENST00000308639 NBPF5PQ86XG9 351 aaPredicted RBP23.53■■□□□ 1.36
RELA-201ENST00000308639 GPR161Q8N6U8 529 aaKnown RBP23.53■■□□□ 1.36
RELA-201ENST00000308639 SH3RF3Q8TEJ3 882 aaPredicted RBP23.53■■□□□ 1.36
RELA-201ENST00000308639 CHP1Q99653 195 aa23.53■■□□□ 1.36
RELA-201ENST00000308639 SLF1Q9BQI6 1058 aa23.53■■□□□ 1.36
RELA-201ENST00000308639 ATP8A2Q9NTI2 1148 aa23.53■■□□□ 1.36
RELA-201ENST00000308639 ABHD10Q9NUJ1 306 aa23.53■■□□□ 1.36
RELA-201ENST00000308639 PCP11498 1178 aaKnown RBP23.53■■□□□ 1.36
RELA-201ENST00000308639 INF2Q27J81 1249 aa23.53■■□□□ 1.36
RELA-201ENST00000308639 NAALADL2Q58DX5 795 aa23.53■■□□□ 1.36
RELA-201ENST00000308639 RASSF8Q8NHQ8 419 aa23.53■■□□□ 1.36
RELA-201ENST00000308639 ARPP21Q9UBL0 812 aaPredicted RBP23.53■■□□□ 1.36
RELA-201ENST00000308639 TRIM10Q9UDY6 481 aa23.53■■□□□ 1.36
RELA-201ENST00000308639 LIMA1Q9UHB6 759 aaKnown RBP23.53■■□□□ 1.36
RELA-201ENST00000308639 RWDD2AQ9UIY3 292 aa23.53■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms