RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 GUCY2DQ02846 1103 aa13.94□□□□□ -0.18
USP38-201ENST00000307017 MAP7Q14244 749 aa13.94□□□□□ -0.18
USP38-201ENST00000307017 FAM47EQ6ZV65 393 aa13.94□□□□□ -0.18
USP38-201ENST00000307017 HAUS1Q96CS2 278 aa13.94□□□□□ -0.18
USP38-201ENST00000307017 ZCWPW1Q9H0M4 648 aa13.94□□□□□ -0.18
USP38-201ENST00000307017 Q3C1V9 767 aa13.93□□□□□ -0.18
USP38-201ENST00000307017 CFAP221Q4G0U5 840 aa13.93□□□□□ -0.18
USP38-201ENST00000307017 POTEDQ86YR6 584 aa13.93□□□□□ -0.18
USP38-201ENST00000307017 CYTH2Q99418 400 aa13.93□□□□□ -0.18
USP38-201ENST00000307017 ESYT2A0FGR8 921 aa13.93□□□□□ -0.18
USP38-201ENST00000307017 SYNDIG1LA6NDD5 238 aa13.93□□□□□ -0.18
USP38-201ENST00000307017 RBBP5Q15291 538 aaKnown RBP13.93□□□□□ -0.18
USP38-201ENST00000307017 RPL13P26373 211 aaKnown RBP13.93□□□□□ -0.18
USP38-201ENST00000307017 GNAQP50148 359 aa13.93□□□□□ -0.18
USP38-201ENST00000307017 NSMFQ6X4W1 530 aa13.93□□□□□ -0.18
USP38-201ENST00000307017 FANCLQ9NW38 375 aa13.93□□□□□ -0.18
USP38-201ENST00000307017 TESPA1A2RU30 521 aaPredicted RBP13.93□□□□□ -0.18
USP38-201ENST00000307017 SSTR3P32745 418 aaPredicted RBP13.93□□□□□ -0.18
USP38-201ENST00000307017 KRT40Q6A162 431 aa13.93□□□□□ -0.18
USP38-201ENST00000307017 GAS2L3Q86XJ1 694 aa13.93□□□□□ -0.18
USP38-201ENST00000307017 GSPT2Q8IYD1 628 aaKnown RBP13.93□□□□□ -0.18
USP38-201ENST00000307017 NME8Q8N427 588 aa13.93□□□□□ -0.18
USP38-201ENST00000307017 NOD1Q9Y239 953 aa13.93□□□□□ -0.18
USP38-201ENST00000307017 MRFAP1Q9Y605 127 aa13.93□□□□□ -0.18
USP38-201ENST00000307017 THAP12O43422 761 aa13.93□□□□□ -0.18
USP38-201ENST00000307017 JPH2Q9BR39 696 aaPredicted RBP13.93□□□□□ -0.18
USP38-201ENST00000307017 ZBTB7BO15156 539 aaPredicted RBP13.92□□□□□ -0.18
USP38-201ENST00000307017 PFKFB1P16118 471 aa13.92□□□□□ -0.18
USP38-201ENST00000307017 SCNN1DP51172 638 aa13.92□□□□□ -0.18
USP38-201ENST00000307017 POLE2P56282 527 aa13.92□□□□□ -0.18
USP38-201ENST00000307017 LRRC41Q15345 812 aa13.92□□□□□ -0.18
USP38-201ENST00000307017 RNF217Q8TC41 542 aa13.92□□□□□ -0.18
USP38-201ENST00000307017 RASGRP4Q8TDF6 673 aa13.92□□□□□ -0.18
USP38-201ENST00000307017 PPP2R2CQ9Y2T4 447 aa13.92□□□□□ -0.18
USP38-201ENST00000307017 CD2APQ9Y5K6 639 aa13.92□□□□□ -0.18
USP38-201ENST00000307017 NPHP3Q7Z494 1330 aa13.92□□□□□ -0.18
USP38-201ENST00000307017 TRAPPC10P48553 1259 aa13.92□□□□□ -0.18
USP38-201ENST00000307017 RASSF2P50749 326 aa13.92□□□□□ -0.18
USP38-201ENST00000307017 LRCH2Q5VUJ6 765 aa13.92□□□□□ -0.18
USP38-201ENST00000307017 LRWD1Q9UFC0 647 aa13.92□□□□□ -0.18
USP38-201ENST00000307017 SAR1BQ9Y6B6 198 aa13.92□□□□□ -0.18
USP38-201ENST00000307017 SULF1Q8IWU6 871 aa13.92□□□□□ -0.18
USP38-201ENST00000307017 SUPT20HQ8NEM7 779 aa13.92□□□□□ -0.18
USP38-201ENST00000307017 CCDC127Q96BQ5 260 aa13.92□□□□□ -0.18
USP38-201ENST00000307017 MRFAP1L1Q96HT8 127 aa13.92□□□□□ -0.18
USP38-201ENST00000307017 TRIM4Q9C037 500 aa13.92□□□□□ -0.18
USP38-201ENST00000307017 ASXL1Q8IXJ9 1541 aa13.92□□□□□ -0.18
USP38-201ENST00000307017 PFDN1O60925 122 aa13.92□□□□□ -0.18
USP38-201ENST00000307017 MMEL1Q495T6 779 aa13.92□□□□□ -0.18
USP38-201ENST00000307017 MYSM1Q5VVJ2 828 aa13.92□□□□□ -0.18
USP38-201ENST00000307017 JADE1Q6IE81 842 aa13.92□□□□□ -0.18
USP38-201ENST00000307017 DEXIO95424 95 aa13.92□□□□□ -0.18
USP38-201ENST00000307017 MYLK4Q86YV6 388 aaPredicted RBP13.92□□□□□ -0.18
USP38-201ENST00000307017 SMTNP53814 917 aa13.92□□□□□ -0.18
USP38-201ENST00000307017 PAK2Q13177 524 aa13.92□□□□□ -0.18
USP38-201ENST00000307017 RAPH1Q70E73 1250 aa13.92□□□□□ -0.18
USP38-201ENST00000307017 MSANTD4Q8NCY6 345 aa13.92□□□□□ -0.18
USP38-201ENST00000307017 KCNV2Q8TDN2 545 aa13.92□□□□□ -0.18
USP38-201ENST00000307017 B4DLN1 442 aa13.91□□□□□ -0.18
USP38-201ENST00000307017 EHHADHQ08426 723 aa13.91□□□□□ -0.18
USP38-201ENST00000307017 CFAP36Q96G28 342 aa13.91□□□□□ -0.18
USP38-201ENST00000307017 TMOD1P28289 359 aa13.91□□□□□ -0.18
USP38-201ENST00000307017 GPBP1Q86WP2 473 aa13.91□□□□□ -0.18
USP38-201ENST00000307017 RASIP1Q5U651 963 aa13.91□□□□□ -0.18
USP38-201ENST00000307017 LRRC8AQ8IWT6 810 aa13.91□□□□□ -0.18
USP38-201ENST00000307017 IFT122Q9HBG6 1241 aa13.91□□□□□ -0.18
USP38-201ENST00000307017 E7EWF7 191 aa13.91□□□□□ -0.18
USP38-201ENST00000307017 MOCS3O95396 460 aa13.91□□□□□ -0.18
USP38-201ENST00000307017 CYP4A11Q02928 519 aa13.91□□□□□ -0.18
USP38-201ENST00000307017 CDC26Q8NHZ8 85 aa13.91□□□□□ -0.18
USP38-201ENST00000307017 PPFIA2O75334 1257 aa13.91□□□□□ -0.18
USP38-201ENST00000307017 FAF1Q9UNN5 650 aaPredicted RBP13.91□□□□□ -0.18
USP38-201ENST00000307017 FAN1Q9Y2M0 1017 aa13.91□□□□□ -0.18
USP38-201ENST00000307017 PLB1Q6P1J6 1458 aa13.9□□□□□ -0.18
USP38-201ENST00000307017 ALKBH8Q96BT7 664 aaKnown RBP13.9□□□□□ -0.18
USP38-201ENST00000307017 VCXQ9H320 206 aa13.9□□□□□ -0.18
USP38-201ENST00000307017 TTC21BQ7Z4L5 1316 aa13.9□□□□□ -0.18
USP38-201ENST00000307017 WDR46O15213 610 aaKnown RBP13.9□□□□□ -0.18
USP38-201ENST00000307017 TMED2Q15363 201 aa13.9□□□□□ -0.18
USP38-201ENST00000307017 PPP1R13BQ96KQ4 1090 aa13.9□□□□□ -0.18
USP38-201ENST00000307017 OLA1Q9NTK5 396 aaKnown RBP13.9□□□□□ -0.18
USP38-201ENST00000307017 RTEL1Q9NZ71 1219 aa13.9□□□□□ -0.18
USP38-201ENST00000307017 CDC25AP30304 524 aa13.9□□□□□ -0.18
USP38-201ENST00000307017 SLC12A2P55011 1212 aa13.9□□□□□ -0.18
USP38-201ENST00000307017 PCIF1Q9H4Z3 704 aa13.9□□□□□ -0.18
USP38-201ENST00000307017 PARP3Q9Y6F1 533 aa13.9□□□□□ -0.18
USP38-201ENST00000307017 SGK1O00141 431 aa13.9□□□□□ -0.18
USP38-201ENST00000307017 EEF1GP26641 437 aaKnown RBP13.9□□□□□ -0.18
USP38-201ENST00000307017 MESDQ14696 234 aa13.9□□□□□ -0.18
USP38-201ENST00000307017 ZNF449Q6P9G9 518 aa13.9□□□□□ -0.18
USP38-201ENST00000307017 HDAC11Q96DB2 347 aa13.9□□□□□ -0.18
USP38-201ENST00000307017 DNM3Q9UQ16 869 aa13.9□□□□□ -0.18
USP38-201ENST00000307017 LRRN2O75325 713 aa13.9□□□□□ -0.18
USP38-201ENST00000307017 KITP10721 976 aa13.9□□□□□ -0.18
USP38-201ENST00000307017 TPCN1Q9ULQ1 816 aa13.9□□□□□ -0.18
USP38-201ENST00000307017 SOS1Q07889 1333 aaPredicted RBP13.9□□□□□ -0.18
USP38-201ENST00000307017 SOWAHDA6NJG2 315 aa13.9□□□□□ -0.19
USP38-201ENST00000307017 PLCD1P51178 756 aa13.9□□□□□ -0.19
USP38-201ENST00000307017 ANO4Q32M45 955 aa13.9□□□□□ -0.19
USP38-201ENST00000307017 AKAP4Q5JQC9 854 aa13.9□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms