RNA–Protein interactions for RNA: ENST00000301732.9

ABCA3-201, Transcript of ATP binding cassette subfamily A member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA3, Length 6,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-201ENST00000301732 SOS1Q07889 1333 aaPredicted RBP13.62□□□□□ -0.23
ABCA3-201ENST00000301732 PLCD1P51178 756 aa13.61□□□□□ -0.23
ABCA3-201ENST00000301732 HDAC9Q9UKV0 1011 aa13.61□□□□□ -0.23
ABCA3-201ENST00000301732 RNF40O75150 1001 aa13.61□□□□□ -0.23
ABCA3-201ENST00000301732 SLC12A2P55011 1212 aa13.61□□□□□ -0.23
ABCA3-201ENST00000301732 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.61□□□□□ -0.23
ABCA3-201ENST00000301732 INTS4Q96HW7 963 aaKnown RBP13.61□□□□□ -0.23
ABCA3-201ENST00000301732 UFL1O94874 794 aa13.61□□□□□ -0.23
ABCA3-201ENST00000301732 DYNLT1P63172 113 aa13.61□□□□□ -0.23
ABCA3-201ENST00000301732 EEF1GP26641 437 aaKnown RBP13.61□□□□□ -0.23
ABCA3-201ENST00000301732 SNCBQ16143 134 aa13.61□□□□□ -0.23
ABCA3-201ENST00000301732 MIER3Q7Z3K6 550 aa13.61□□□□□ -0.23
ABCA3-201ENST00000301732 LRRC8AQ8IWT6 810 aa13.61□□□□□ -0.23
ABCA3-201ENST00000301732 SDR42E1Q8WUS8 393 aa13.61□□□□□ -0.23
ABCA3-201ENST00000301732 NOP56O00567 594 aaKnown RBP13.61□□□□□ -0.23
ABCA3-201ENST00000301732 NDUFA8P51970 172 aa13.61□□□□□ -0.23
ABCA3-201ENST00000301732 SMTNP53814 917 aa13.61□□□□□ -0.23
ABCA3-201ENST00000301732 MORC3Q14149 939 aa13.61□□□□□ -0.23
ABCA3-201ENST00000301732 MMEL1Q495T6 779 aa13.61□□□□□ -0.23
ABCA3-201ENST00000301732 TMTC1Q8IUR5 882 aa13.61□□□□□ -0.23
ABCA3-201ENST00000301732 MMS19Q96T76 1030 aa13.61□□□□□ -0.23
ABCA3-201ENST00000301732 ANGEL1Q9UNK9 670 aaKnown RBP13.61□□□□□ -0.23
ABCA3-201ENST00000301732 RRP15Q9Y3B9 282 aaKnown RBP13.6□□□□□ -0.23
ABCA3-201ENST00000301732 APOEP02649 317 aa13.6□□□□□ -0.23
ABCA3-201ENST00000301732 KRT81Q14533 505 aa13.6□□□□□ -0.23
ABCA3-201ENST00000301732 RILPL1Q5EBL4 403 aa13.6□□□□□ -0.23
ABCA3-201ENST00000301732 ZNF449Q6P9G9 518 aa13.6□□□□□ -0.23
ABCA3-201ENST00000301732 TTC30BQ8N4P2 665 aa13.6□□□□□ -0.23
ABCA3-201ENST00000301732 A1BGP04217 495 aa13.6□□□□□ -0.23
ABCA3-201ENST00000301732 HDLBPQ00341 1268 aaKnown RBP13.6□□□□□ -0.23
ABCA3-201ENST00000301732 CYP4F22Q6NT55 531 aa13.6□□□□□ -0.23
ABCA3-201ENST00000301732 PGBD1Q96JS3 809 aa13.6□□□□□ -0.23
ABCA3-201ENST00000301732 PPP1R16BQ96T49 567 aa13.6□□□□□ -0.23
ABCA3-201ENST00000301732 AMFRQ9UKV5 643 aa13.6□□□□□ -0.23
ABCA3-201ENST00000301732 TTC41PQ6P2S7 1318 aa13.6□□□□□ -0.23
ABCA3-201ENST00000301732 NOD1Q9Y239 953 aa13.6□□□□□ -0.23
ABCA3-201ENST00000301732 ADD1P35611 737 aaKnown RBP13.6□□□□□ -0.23
ABCA3-201ENST00000301732 AP1ARQ63HQ0 302 aa13.6□□□□□ -0.23
ABCA3-201ENST00000301732 IFT122Q9HBG6 1241 aa13.6□□□□□ -0.23
ABCA3-201ENST00000301732 TROVE2P10155 538 aaKnown RBP eCLIP13.59□□□□□ -0.23
ABCA3-201ENST00000301732 DBN1Q16643 649 aa13.59□□□□□ -0.23
ABCA3-201ENST00000301732 RFX8Q6ZV50 586 aa13.59□□□□□ -0.23
ABCA3-201ENST00000301732 SLC35F6Q8N357 371 aa13.59□□□□□ -0.23
ABCA3-201ENST00000301732 NME8Q8N427 588 aa13.59□□□□□ -0.23
ABCA3-201ENST00000301732 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.59□□□□□ -0.23
ABCA3-201ENST00000301732 SUCLG2Q96I99 432 aa13.59□□□□□ -0.23
ABCA3-201ENST00000301732 CCDC141Q6ZP82 1450 aa13.59□□□□□ -0.23
ABCA3-201ENST00000301732 PRPF6O94906 941 aaKnown RBP13.59□□□□□ -0.23
ABCA3-201ENST00000301732 NUCKS1Q9H1E3 243 aaKnown RBP13.59□□□□□ -0.23
ABCA3-201ENST00000301732 LGR6Q9HBX8 967 aa13.59□□□□□ -0.23
ABCA3-201ENST00000301732 ZBTB12Q9Y330 459 aaPredicted RBP13.59□□□□□ -0.23
ABCA3-201ENST00000301732 MAP3K1Q13233 1512 aa13.59□□□□□ -0.23
ABCA3-201ENST00000301732 ZNF532Q9HCE3 1301 aa13.59□□□□□ -0.23
ABCA3-201ENST00000301732 CUTAO60888 179 aa13.59□□□□□ -0.23
ABCA3-201ENST00000301732 HABP4Q5JVS0 413 aaKnown RBP13.59□□□□□ -0.23
ABCA3-201ENST00000301732 KCNV2Q8TDN2 545 aa13.59□□□□□ -0.23
ABCA3-201ENST00000301732 PPWD1Q96BP3 646 aaKnown RBP13.59□□□□□ -0.23
ABCA3-201ENST00000301732 MYCBPQ99417 103 aaPredicted RBP13.59□□□□□ -0.23
ABCA3-201ENST00000301732 MED10Q9BTT4 135 aa13.59□□□□□ -0.23
ABCA3-201ENST00000301732 PPP1R9AQ9ULJ8 1098 aa13.59□□□□□ -0.23
ABCA3-201ENST00000301732 TMOD1P28289 359 aa13.59□□□□□ -0.23
ABCA3-201ENST00000301732 CYP4A11Q02928 519 aa13.59□□□□□ -0.23
ABCA3-201ENST00000301732 CCDC117Q8IWD4 279 aaPredicted RBP13.59□□□□□ -0.23
ABCA3-201ENST00000301732 F5H423 210 aaPredicted RBP13.59□□□□□ -0.23
ABCA3-201ENST00000301732 CDC25AP30304 524 aa13.59□□□□□ -0.23
ABCA3-201ENST00000301732 PHEXP78562 749 aa13.59□□□□□ -0.23
ABCA3-201ENST00000301732 LRRC41Q15345 812 aa13.59□□□□□ -0.23
ABCA3-201ENST00000301732 TRMT10CQ7L0Y3 403 aaKnown RBP13.59□□□□□ -0.23
ABCA3-201ENST00000301732 DNM3Q9UQ16 869 aa13.59□□□□□ -0.23
ABCA3-201ENST00000301732 PRXQ9BXM0 1461 aa13.59□□□□□ -0.23
ABCA3-201ENST00000301732 ZBTB22O15209 634 aa13.59□□□□□ -0.23
ABCA3-201ENST00000301732 MESDQ14696 234 aa13.59□□□□□ -0.23
ABCA3-201ENST00000301732 HDAC11Q96DB2 347 aa13.59□□□□□ -0.23
ABCA3-201ENST00000301732 ATP8A1Q9Y2Q0 1164 aa13.59□□□□□ -0.23
ABCA3-201ENST00000301732 INPP1P49441 399 aa13.58□□□□□ -0.23
ABCA3-201ENST00000301732 SUPT20HQ8NEM7 779 aa13.58□□□□□ -0.23
ABCA3-201ENST00000301732 UBN2Q6ZU65 1347 aa13.58□□□□□ -0.24
ABCA3-201ENST00000301732 B4DLN1 442 aa13.58□□□□□ -0.24
ABCA3-201ENST00000301732 CFLARO15519 480 aa13.58□□□□□ -0.24
ABCA3-201ENST00000301732 STK10O94804 968 aaKnown RBP13.58□□□□□ -0.24
ABCA3-201ENST00000301732 TUBB4AP04350 444 aa13.58□□□□□ -0.24
ABCA3-201ENST00000301732 BIRC2Q13490 618 aa13.58□□□□□ -0.24
ABCA3-201ENST00000301732 RNF217Q8TC41 542 aa13.58□□□□□ -0.24
ABCA3-201ENST00000301732 APOL6Q9BWW8 343 aa13.58□□□□□ -0.24
ABCA3-201ENST00000301732 SFMBT1Q9UHJ3 866 aa13.58□□□□□ -0.24
ABCA3-201ENST00000301732 TTC21BQ7Z4L5 1316 aa13.58□□□□□ -0.24
ABCA3-201ENST00000301732 E7EWF7 191 aa13.58□□□□□ -0.24
ABCA3-201ENST00000301732 H0Y3Z8 333 aa13.58□□□□□ -0.24
ABCA3-201ENST00000301732 GPBP1Q86WP2 473 aa13.58□□□□□ -0.24
ABCA3-201ENST00000301732 GSPT2Q8IYD1 628 aaKnown RBP13.58□□□□□ -0.24
ABCA3-201ENST00000301732 N4BP2L2Q92802 583 aaPredicted RBP13.58□□□□□ -0.24
ABCA3-201ENST00000301732 PPP1R13BQ96KQ4 1090 aa13.58□□□□□ -0.24
ABCA3-201ENST00000301732 GNPATO15228 680 aa13.58□□□□□ -0.24
ABCA3-201ENST00000301732 CASP14P31944 242 aa13.58□□□□□ -0.24
ABCA3-201ENST00000301732 ZNF445P59923 1031 aa13.58□□□□□ -0.24
ABCA3-201ENST00000301732 RNF168Q8IYW5 571 aaPredicted RBP13.58□□□□□ -0.24
ABCA3-201ENST00000301732 LRRC47Q8N1G4 583 aaKnown RBP13.58□□□□□ -0.24
ABCA3-201ENST00000301732 ARHGAP24Q8N264 748 aa13.58□□□□□ -0.24
ABCA3-201ENST00000301732 ACRBPQ8NEB7 543 aa13.58□□□□□ -0.24
ABCA3-201ENST00000301732 RASGRP4Q8TDF6 673 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms