RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 FNTAP49354 379 aa12.22□□□□□ -0.45
ZNF558-201ENST00000301475 MRPS25P82663 173 aaKnown RBP12.22□□□□□ -0.45
ZNF558-201ENST00000301475 KCNJ12Q14500 433 aa12.22□□□□□ -0.45
ZNF558-201ENST00000301475 TTF1Q15361 905 aaPredicted RBP12.22□□□□□ -0.45
ZNF558-201ENST00000301475 WASF1Q92558 559 aa12.22□□□□□ -0.45
ZNF558-201ENST00000301475 AIDAQ96BJ3 306 aa12.22□□□□□ -0.45
ZNF558-201ENST00000301475 CCDC85AQ96PX6 553 aaPredicted RBP12.22□□□□□ -0.45
ZNF558-201ENST00000301475 VPS54Q9P1Q0 977 aa12.22□□□□□ -0.45
ZNF558-201ENST00000301475 UBXN1Q04323 297 aa12.22□□□□□ -0.45
ZNF558-201ENST00000301475 CTDSPL2Q05D32 466 aa12.22□□□□□ -0.45
ZNF558-201ENST00000301475 PPARAQ07869 468 aa12.22□□□□□ -0.45
ZNF558-201ENST00000301475 TTMPQ5BVD1 217 aa12.22□□□□□ -0.45
ZNF558-201ENST00000301475 BRINP3Q76B58 766 aa12.22□□□□□ -0.45
ZNF558-201ENST00000301475 ARL8AQ96BM9 186 aa12.22□□□□□ -0.45
ZNF558-201ENST00000301475 DMGDHQ9UI17 866 aaKnown RBP12.22□□□□□ -0.45
ZNF558-201ENST00000301475 CEP131Q9UPN4 1083 aa12.22□□□□□ -0.45
ZNF558-201ENST00000301475 TBC1D2BQ9UPU7 963 aa12.22□□□□□ -0.45
ZNF558-201ENST00000301475 CAPN7Q9Y6W3 813 aa12.22□□□□□ -0.45
ZNF558-201ENST00000301475 PDCLQ13371 301 aa12.21□□□□□ -0.45
ZNF558-201ENST00000301475 RRAGBQ5VZM2 374 aa12.21□□□□□ -0.45
ZNF558-201ENST00000301475 AEBP2Q6ZN18 517 aaPredicted RBP12.21□□□□□ -0.45
ZNF558-201ENST00000301475 TSEN2Q8NCE0 465 aaKnown RBP12.21□□□□□ -0.45
ZNF558-201ENST00000301475 DNAJC7Q99615 494 aa12.21□□□□□ -0.45
ZNF558-201ENST00000301475 EPB41L4AQ9HCS5 686 aaPredicted RBP12.21□□□□□ -0.45
ZNF558-201ENST00000301475 POLD4Q9HCU8 107 aa12.21□□□□□ -0.45
ZNF558-201ENST00000301475 SLAIN2Q9P270 581 aa12.21□□□□□ -0.45
ZNF558-201ENST00000301475 DUSP10Q9Y6W6 482 aa12.21□□□□□ -0.45
ZNF558-201ENST00000301475 NID2Q14112 1375 aa12.21□□□□□ -0.45
ZNF558-201ENST00000301475 CCDC172P0C7W6 258 aa12.21□□□□□ -0.45
ZNF558-201ENST00000301475 RTN1Q16799 776 aa12.21□□□□□ -0.45
ZNF558-201ENST00000301475 GBP6Q6ZN66 633 aa12.21□□□□□ -0.45
ZNF558-201ENST00000301475 ANKRD18AQ8IVF6 992 aa12.21□□□□□ -0.45
ZNF558-201ENST00000301475 TRIM22Q8IYM9 498 aa12.21□□□□□ -0.45
ZNF558-201ENST00000301475 OR8K1Q8NGG5 319 aa12.21□□□□□ -0.45
ZNF558-201ENST00000301475 MTRQ99707 1265 aa12.21□□□□□ -0.45
ZNF558-201ENST00000301475 ZKSCAN3Q9BRR0 538 aa12.21□□□□□ -0.45
ZNF558-201ENST00000301475 ZBTB3Q9H5J0 574 aa12.21□□□□□ -0.45
ZNF558-201ENST00000301475 MEGF6O75095 1541 aa12.21□□□□□ -0.45
ZNF558-201ENST00000301475 RIC1Q4ADV7 1423 aa12.21□□□□□ -0.46
ZNF558-201ENST00000301475 MYH10P35580 1976 aa12.21□□□□□ -0.46
ZNF558-201ENST00000301475 TRIM75PA6NK02 468 aa12.21□□□□□ -0.46
ZNF558-201ENST00000301475 ATP6V1AP38606 617 aa12.21□□□□□ -0.46
ZNF558-201ENST00000301475 PAK1Q13153 545 aa12.21□□□□□ -0.46
ZNF558-201ENST00000301475 IRF2BP1Q8IU81 584 aa12.21□□□□□ -0.46
ZNF558-201ENST00000301475 PIH1D3Q9NQM4 214 aaKnown RBP12.21□□□□□ -0.46
ZNF558-201ENST00000301475 RWDD2AQ9UIY3 292 aa12.21□□□□□ -0.46
ZNF558-201ENST00000301475 MAPK8IP1Q9UQF2 711 aa12.21□□□□□ -0.46
ZNF558-201ENST00000301475 ABCC12Q96J65 1359 aa12.21□□□□□ -0.46
ZNF558-201ENST00000301475 STRCP1A6NGW2 1772 aa12.2□□□□□ -0.46
ZNF558-201ENST00000301475 ZNF532Q9HCE3 1301 aa12.2□□□□□ -0.46
ZNF558-201ENST00000301475 IDH1O75874 414 aaKnown RBP12.2□□□□□ -0.46
ZNF558-201ENST00000301475 DEXIO95424 95 aa12.2□□□□□ -0.46
ZNF558-201ENST00000301475 SPAG1Q07617 926 aa12.2□□□□□ -0.46
ZNF558-201ENST00000301475 CRACR2BQ8N4Y2 399 aaPredicted RBP12.2□□□□□ -0.46
ZNF558-201ENST00000301475 NELFBQ8WX92 580 aa12.2□□□□□ -0.46
ZNF558-201ENST00000301475 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.2□□□□□ -0.464e-6■■□□□ 13.6
ZNF558-201ENST00000301475 GOLGA8KD6RF30 607 aa12.2□□□□□ -0.46
ZNF558-201ENST00000301475 IDEP14735 1019 aa12.2□□□□□ -0.46
ZNF558-201ENST00000301475 USP8P40818 1118 aa12.2□□□□□ -0.46
ZNF558-201ENST00000301475 KIAA1328Q86T90 577 aa12.2□□□□□ -0.46
ZNF558-201ENST00000301475 SH2D3CQ8N5H7 860 aa12.2□□□□□ -0.46
ZNF558-201ENST00000301475 RAPGEF4Q8WZA2 1011 aa12.2□□□□□ -0.46
ZNF558-201ENST00000301475 LRRC1Q9BTT6 524 aa12.2□□□□□ -0.46
ZNF558-201ENST00000301475 CEP83Q9Y592 693 aa12.2□□□□□ -0.46
ZNF558-201ENST00000301475 TRIM49BA6NDI0 452 aa12.19□□□□□ -0.46
ZNF558-201ENST00000301475 NDUFAB1O14561 156 aa12.19□□□□□ -0.46
ZNF558-201ENST00000301475 SKOR1P84550 965 aa12.19□□□□□ -0.46
ZNF558-201ENST00000301475 CCDC57Q2TAC2 916 aa12.19□□□□□ -0.46
ZNF558-201ENST00000301475 JPH2Q9BR39 696 aaPredicted RBP12.19□□□□□ -0.46
ZNF558-201ENST00000301475 JADE2Q9NQC1 790 aa12.19□□□□□ -0.46
ZNF558-201ENST00000301475 GDAQ9Y2T3 454 aa12.19□□□□□ -0.46
ZNF558-201ENST00000301475 LUC7L2Q9Y383 392 aaKnown RBP12.19□□□□□ -0.46
ZNF558-201ENST00000301475 MYH2Q9UKX2 1941 aa12.19□□□□□ -0.46
ZNF558-201ENST00000301475 MACROD2A1Z1Q3 448 aa12.19□□□□□ -0.46
ZNF558-201ENST00000301475 SLC7A5Q01650 507 aa12.19□□□□□ -0.46
ZNF558-201ENST00000301475 EP400NLQ6ZTU2 488 aa12.19□□□□□ -0.46
ZNF558-201ENST00000301475 CREG2Q8IUH2 290 aa12.19□□□□□ -0.46
ZNF558-201ENST00000301475 AMOTL1Q8IY63 956 aa12.19□□□□□ -0.46
ZNF558-201ENST00000301475 CABS1Q96KC9 395 aa12.19□□□□□ -0.46
ZNF558-201ENST00000301475 DONSONQ9NYP3 566 aa12.19□□□□□ -0.46
ZNF558-201ENST00000301475 ATXN2Q99700 1313 aaKnown RBP12.19□□□□□ -0.46
ZNF558-201ENST00000301475 ANO9A1A5B4 782 aa12.19□□□□□ -0.46
ZNF558-201ENST00000301475 KRT86O43790 486 aa12.19□□□□□ -0.46
ZNF558-201ENST00000301475 GPTP24298 496 aa12.19□□□□□ -0.46
ZNF558-201ENST00000301475 MB21D1Q8N884 522 aa12.19□□□□□ -0.46
ZNF558-201ENST00000301475 CCDC196A0A1B0GTZ2 297 aa12.18□□□□□ -0.46
ZNF558-201ENST00000301475 FSBPO95073 299 aa12.18□□□□□ -0.46
ZNF558-201ENST00000301475 PARP1P09874 1014 aaKnown RBP12.18□□□□□ -0.46
ZNF558-201ENST00000301475 PDE6AP16499 860 aa12.18□□□□□ -0.46
ZNF558-201ENST00000301475 ATP1A2P50993 1020 aa12.18□□□□□ -0.46
ZNF558-201ENST00000301475 CYP27A1Q02318 531 aa12.18□□□□□ -0.46
ZNF558-201ENST00000301475 TCIRG1Q13488 830 aa12.18□□□□□ -0.46
ZNF558-201ENST00000301475 MEA1Q16626 185 aa12.18□□□□□ -0.46
ZNF558-201ENST00000301475 FKBP15Q5T1M5 1219 aa12.18□□□□□ -0.46
ZNF558-201ENST00000301475 PDXDC2PQ6P474 469 aa12.18□□□□□ -0.46
ZNF558-201ENST00000301475 ZNF662Q6ZS27 426 aa12.18□□□□□ -0.46
ZNF558-201ENST00000301475 EHBP1Q8NDI1 1231 aa12.18□□□□□ -0.46
ZNF558-201ENST00000301475 SMCR8Q8TEV9 937 aaPredicted RBP12.18□□□□□ -0.46
ZNF558-201ENST00000301475 PURBQ96QR8 312 aaKnown RBP12.18□□□□□ -0.46
ZNF558-201ENST00000301475 STRBPQ96SI9 672 aaKnown RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms