RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 UGGT2Q9NYU1 1516 aa14.98□□□□□ -0.01
CHRFAM7A-201ENST00000299847 DLATP10515 647 aaKnown RBP14.98□□□□□ -0.01
CHRFAM7A-201ENST00000299847 DNM2P50570 870 aa14.98□□□□□ -0.01
CHRFAM7A-201ENST00000299847 SLC39A2Q9NP94 309 aa14.98□□□□□ -0.01
CHRFAM7A-201ENST00000299847 MROH5Q6ZUA9 1318 aa14.98□□□□□ -0.01
CHRFAM7A-201ENST00000299847 ATF7P17544 494 aaPredicted RBP14.98□□□□□ -0.01
CHRFAM7A-201ENST00000299847 PDE1CQ14123 709 aaPredicted RBP14.98□□□□□ -0.01
CHRFAM7A-201ENST00000299847 KRT71Q3SY84 523 aa14.98□□□□□ -0.01
CHRFAM7A-201ENST00000299847 NAA35Q5VZE5 725 aa14.98□□□□□ -0.01
CHRFAM7A-201ENST00000299847 PANK4Q9NVE7 773 aa14.98□□□□□ -0.01
CHRFAM7A-201ENST00000299847 ATP10BO94823 1461 aa14.98□□□□□ -0.01
CHRFAM7A-201ENST00000299847 K7ENM7 598 aa14.98□□□□□ -0.01
CHRFAM7A-201ENST00000299847 IRX3P78415 501 aaPredicted RBP14.98□□□□□ -0.01
CHRFAM7A-201ENST00000299847 FLOT1O75955 427 aa14.97□□□□□ -0.01
CHRFAM7A-201ENST00000299847 CTSWP56202 376 aa14.97□□□□□ -0.01
CHRFAM7A-201ENST00000299847 PALM2Q8IXS6 379 aa14.97□□□□□ -0.01
CHRFAM7A-201ENST00000299847 DEPTORQ8TB45 409 aa14.97□□□□□ -0.01
CHRFAM7A-201ENST00000299847 ZNF496Q96IT1 587 aaPredicted RBP14.97□□□□□ -0.01
CHRFAM7A-201ENST00000299847 RIOK1Q9BRS2 568 aaKnown RBP14.97□□□□□ -0.01
CHRFAM7A-201ENST00000299847 CLIC4Q9Y696 253 aa14.97□□□□□ -0.01
CHRFAM7A-201ENST00000299847 SPDYE16A6NNV3 312 aaPredicted RBP14.97□□□□□ -0.01
CHRFAM7A-201ENST00000299847 NEURL1BA8MQ27 555 aa14.97□□□□□ -0.01
CHRFAM7A-201ENST00000299847 ERCC6LQ2NKX8 1250 aa14.97□□□□□ -0.01
CHRFAM7A-201ENST00000299847 SPDYE2Q495Y8 402 aa14.97□□□□□ -0.01
CHRFAM7A-201ENST00000299847 LRRC24Q50LG9 513 aa14.97□□□□□ -0.01
CHRFAM7A-201ENST00000299847 GADL1Q6ZQY3 521 aa14.97□□□□□ -0.01
CHRFAM7A-201ENST00000299847 CCDC125Q86Z20 511 aa14.97□□□□□ -0.01
CHRFAM7A-201ENST00000299847 ZSCAN10Q96SZ4 725 aaPredicted RBP14.97□□□□□ -0.01
CHRFAM7A-201ENST00000299847 KRT12Q99456 494 aa14.97□□□□□ -0.01
CHRFAM7A-201ENST00000299847 PALD1Q9ULE6 856 aa14.97□□□□□ -0.01
CHRFAM7A-201ENST00000299847 PIK3C2GO75747 1445 aa14.97□□□□□ -0.01
CHRFAM7A-201ENST00000299847 PAK2Q13177 524 aa14.97□□□□□ -0.01
CHRFAM7A-201ENST00000299847 M0QZ92 97 aa14.97□□□□□ -0.01
CHRFAM7A-201ENST00000299847 GSPT1P15170 499 aaKnown RBP14.97□□□□□ -0.01
CHRFAM7A-201ENST00000299847 BIRC2Q13490 618 aa14.97□□□□□ -0.01
CHRFAM7A-201ENST00000299847 DLGAP5Q15398 846 aa14.97□□□□□ -0.01
CHRFAM7A-201ENST00000299847 MFSD14BQ5SR56 506 aa14.97□□□□□ -0.01
CHRFAM7A-201ENST00000299847 CCDC13Q8IYE1 715 aa14.97□□□□□ -0.01
CHRFAM7A-201ENST00000299847 SMCR8Q8TEV9 937 aaPredicted RBP14.97□□□□□ -0.01
CHRFAM7A-201ENST00000299847 NSMCE1Q8WV22 266 aa14.97□□□□□ -0.01
CHRFAM7A-201ENST00000299847 ANKFY1Q9P2R3 1169 aa14.97□□□□□ -0.01
CHRFAM7A-201ENST00000299847 APBA3O96018 575 aa14.97□□□□□ -0.01
CHRFAM7A-201ENST00000299847 DCLK2Q8N568 766 aa14.97□□□□□ -0.01
CHRFAM7A-201ENST00000299847 CABS1Q96KC9 395 aa14.97□□□□□ -0.01
CHRFAM7A-201ENST00000299847 NUF2Q9BZD4 464 aa14.97□□□□□ -0.01
CHRFAM7A-201ENST00000299847 IMPACTQ9P2X3 320 aa14.97□□□□□ -0.01
CHRFAM7A-201ENST00000299847 FEZ2Q9UHY8 353 aaPredicted RBP14.97□□□□□ -0.01
CHRFAM7A-201ENST00000299847 TPCN1Q9ULQ1 816 aa14.97□□□□□ -0.01
CHRFAM7A-201ENST00000299847 ADD1P35611 737 aaKnown RBP14.96□□□□□ -0.01
CHRFAM7A-201ENST00000299847 BRDTQ58F21 947 aaPredicted RBP14.96□□□□□ -0.01
CHRFAM7A-201ENST00000299847 SYCE1Q8N0S2 351 aa14.96□□□□□ -0.01
CHRFAM7A-201ENST00000299847 MLXIPQ9HAP2 919 aa14.96□□□□□ -0.01
CHRFAM7A-201ENST00000299847 PTPN22Q9Y2R2 807 aa14.96□□□□□ -0.01
CHRFAM7A-201ENST00000299847 CNGA1P29973 690 aa14.96□□□□□ -0.01
CHRFAM7A-201ENST00000299847 CTNNA1P35221 906 aaKnown RBP14.96□□□□□ -0.01
CHRFAM7A-201ENST00000299847 APOL6Q9BWW8 343 aa14.96□□□□□ -0.01
CHRFAM7A-201ENST00000299847 MAST3O60307 1309 aa14.96□□□□□ -0.01
CHRFAM7A-201ENST00000299847 IBTKQ9P2D0 1353 aaPredicted RBP14.96□□□□□ -0.01
CHRFAM7A-201ENST00000299847 POLR2FP61218 127 aaKnown RBP14.96□□□□□ -0.01
CHRFAM7A-201ENST00000299847 PPP2R5AQ15172 486 aa14.96□□□□□ -0.01
CHRFAM7A-201ENST00000299847 KMT5BQ4FZB7 885 aa14.96□□□□□ -0.01
CHRFAM7A-201ENST00000299847 TTLL7Q6ZT98 887 aa14.96□□□□□ -0.01
CHRFAM7A-201ENST00000299847 AMFRQ9UKV5 643 aa14.96□□□□□ -0.01
CHRFAM7A-201ENST00000299847 A0A087WWV3 80 aa14.96□□□□□ -0.01
CHRFAM7A-201ENST00000299847 TRIM68Q6AZZ1 485 aa14.96□□□□□ -0.01
CHRFAM7A-201ENST00000299847 NLRX1Q86UT6 975 aa14.96□□□□□ -0.01
CHRFAM7A-201ENST00000299847 NIM1KQ8IY84 436 aa14.96□□□□□ -0.01
CHRFAM7A-201ENST00000299847 SBNO1A3KN83 1393 aa14.96□□□□□ -0.02
CHRFAM7A-201ENST00000299847 NOP9Q86U38 636 aaKnown RBP14.96□□□□□ -0.02
CHRFAM7A-201ENST00000299847 EIF4G3O43432 1585 aaKnown RBP14.96□□□□□ -0.02
CHRFAM7A-201ENST00000299847 KRIT1O00522 736 aa14.95□□□□□ -0.02
CHRFAM7A-201ENST00000299847 ARHGAP6O43182 974 aa14.95□□□□□ -0.02
CHRFAM7A-201ENST00000299847 ADCY8P40145 1251 aa14.95□□□□□ -0.02
CHRFAM7A-201ENST00000299847 KIAA0825Q8IV33 1275 aa14.95□□□□□ -0.02
CHRFAM7A-201ENST00000299847 PGBD1Q96JS3 809 aa14.95□□□□□ -0.02
CHRFAM7A-201ENST00000299847 SUGCTQ9HAC7 445 aa14.95□□□□□ -0.02
CHRFAM7A-201ENST00000299847 STAM2O75886 525 aa14.95□□□□□ -0.02
CHRFAM7A-201ENST00000299847 ADCY1Q08828 1119 aa14.95□□□□□ -0.02
CHRFAM7A-201ENST00000299847 XKR9Q5GH70 373 aa14.95□□□□□ -0.02
CHRFAM7A-201ENST00000299847 GSDMBQ8TAX9 411 aa14.95□□□□□ -0.02
CHRFAM7A-201ENST00000299847 SCYL1Q96KG9 808 aa14.95□□□□□ -0.02
CHRFAM7A-201ENST00000299847 VCX3BQ9H321 246 aa14.95□□□□□ -0.02
CHRFAM7A-201ENST00000299847 CASQ2O14958 399 aaPredicted RBP14.95□□□□□ -0.02
CHRFAM7A-201ENST00000299847 GIGYF1O75420 1035 aaPredicted RBP14.95□□□□□ -0.02
CHRFAM7A-201ENST00000299847 LIG4P49917 911 aa14.95□□□□□ -0.02
CHRFAM7A-201ENST00000299847 SLC12A2P55011 1212 aa14.95□□□□□ -0.02
CHRFAM7A-201ENST00000299847 SESN3P58005 492 aa14.95□□□□□ -0.02
CHRFAM7A-201ENST00000299847 LMNTD2Q8IXW0 634 aa14.95□□□□□ -0.02
CHRFAM7A-201ENST00000299847 MYRIPQ8NFW9 859 aa14.95□□□□□ -0.02
CHRFAM7A-201ENST00000299847 PSTPIP2Q9H939 334 aa14.95□□□□□ -0.02
CHRFAM7A-201ENST00000299847 BAIAP2L1Q9UHR4 511 aa14.95□□□□□ -0.02
CHRFAM7A-201ENST00000299847 NUP160Q12769 1436 aa14.95□□□□□ -0.02
CHRFAM7A-201ENST00000299847 USP28Q96RU2 1077 aa14.95□□□□□ -0.02
CHRFAM7A-201ENST00000299847 DDX25Q9UHL0 483 aaKnown RBP14.95□□□□□ -0.02
CHRFAM7A-201ENST00000299847 EIF4A1P60842 406 aaKnown RBP14.95□□□□□ -0.02
CHRFAM7A-201ENST00000299847 POLA2Q14181 598 aa14.95□□□□□ -0.02
CHRFAM7A-201ENST00000299847 IFNL3Q8IZI9 196 aa14.95□□□□□ -0.02
CHRFAM7A-201ENST00000299847 RAB20Q9NX57 234 aa14.95□□□□□ -0.02
CHRFAM7A-201ENST00000299847 UHRF1BP1Q6BDS2 1440 aa14.94□□□□□ -0.02
CHRFAM7A-201ENST00000299847 CACNB1Q02641 598 aaPredicted RBP14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms