RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 PRPF3O43395 683 aaKnown RBP17.48■□□□□ 0.39
DDX55-201ENST00000238146 PDE8AO60658 829 aa17.48■□□□□ 0.39
DDX55-201ENST00000238146 RNF40O75150 1001 aa17.48■□□□□ 0.39
DDX55-201ENST00000238146 NPY5RQ15761 445 aa17.48■□□□□ 0.39
DDX55-201ENST00000238146 TTC38Q5R3I4 469 aa17.48■□□□□ 0.39
DDX55-201ENST00000238146 PDXDC2PQ6P474 469 aa17.48■□□□□ 0.39
DDX55-201ENST00000238146 ANKRD20A12PQ8NF67 263 aa17.48■□□□□ 0.39
DDX55-201ENST00000238146 RNF216Q9NWF9 866 aaPredicted RBP17.48■□□□□ 0.39
DDX55-201ENST00000238146 MROH5Q6ZUA9 1318 aa17.48■□□□□ 0.39
DDX55-201ENST00000238146 SMIM22K7EJ46 135 aa17.48■□□□□ 0.39
DDX55-201ENST00000238146 PLEKHA8P1O95397 391 aa17.48■□□□□ 0.39
DDX55-201ENST00000238146 SLC5A1P13866 664 aa17.48■□□□□ 0.39
DDX55-201ENST00000238146 UBXN1Q04323 297 aa17.48■□□□□ 0.39
DDX55-201ENST00000238146 MMS19Q96T76 1030 aa17.48■□□□□ 0.39
DDX55-201ENST00000238146 HAUS4Q9H6D7 363 aa17.48■□□□□ 0.39
DDX55-201ENST00000238146 EFCC1Q9HA90 598 aa17.48■□□□□ 0.39
DDX55-201ENST00000238146 ASAP1Q9ULH1 1129 aa17.48■□□□□ 0.39
DDX55-201ENST00000238146 MYH6P13533 1939 aa17.47■□□□□ 0.39
DDX55-201ENST00000238146 TTC26A0AVF1 554 aa17.47■□□□□ 0.39
DDX55-201ENST00000238146 GTPBP6O43824 516 aaPredicted RBP17.47■□□□□ 0.39
DDX55-201ENST00000238146 PRPF6O94906 941 aaKnown RBP17.47■□□□□ 0.39
DDX55-201ENST00000238146 NOP2P46087 812 aaKnown RBP17.47■□□□□ 0.39
DDX55-201ENST00000238146 TMOD3Q9NYL9 352 aa17.47■□□□□ 0.39
DDX55-201ENST00000238146 RTL9Q8NET4 1388 aa17.47■□□□□ 0.39
DDX55-201ENST00000238146 ATP1A1P05023 1023 aaKnown RBP17.47■□□□□ 0.39
DDX55-201ENST00000238146 IL2RBP14784 551 aa17.47■□□□□ 0.39
DDX55-201ENST00000238146 ZNF658Q5TYW1 1059 aaPredicted RBP17.47■□□□□ 0.39
DDX55-201ENST00000238146 IRF2BP1Q8IU81 584 aa17.47■□□□□ 0.39
DDX55-201ENST00000238146 OR8K1Q8NGG5 319 aa17.47■□□□□ 0.39
DDX55-201ENST00000238146 MAPK8IP1Q9UQF2 711 aa17.47■□□□□ 0.39
DDX55-201ENST00000238146 MINDY4BA8MYZ0 360 aa17.46■□□□□ 0.39
DDX55-201ENST00000238146 EIF3CLB5ME19 914 aaKnown RBP17.46■□□□□ 0.39
DDX55-201ENST00000238146 STARD3NLO95772 234 aa17.46■□□□□ 0.39
DDX55-201ENST00000238146 ENAHQ8N8S7 591 aaPredicted RBP17.46■□□□□ 0.39
DDX55-201ENST00000238146 CTCFLQ8NI51 663 aaPredicted RBP17.46■□□□□ 0.39
DDX55-201ENST00000238146 ESR2Q92731 530 aa17.46■□□□□ 0.39
DDX55-201ENST00000238146 EIF3CQ99613 913 aaKnown RBP17.46■□□□□ 0.39
DDX55-201ENST00000238146 HPCAL4Q9UM19 191 aa17.46■□□□□ 0.39
DDX55-201ENST00000238146 TFR2Q9UP52 801 aa17.46■□□□□ 0.39
DDX55-201ENST00000238146 ZC3H4Q9UPT8 1303 aaKnown RBP17.46■□□□□ 0.39
DDX55-201ENST00000238146 SRGAP2O75044 1071 aa17.46■□□□□ 0.39
DDX55-201ENST00000238146 HERVK_113P62684 666 aa17.46■□□□□ 0.39
DDX55-201ENST00000238146 GDAQ9Y2T3 454 aa17.46■□□□□ 0.39
DDX55-201ENST00000238146 SAR1BQ9Y6B6 198 aa17.46■□□□□ 0.39
DDX55-201ENST00000238146 DOCK2Q92608 1830 aa17.46■□□□□ 0.39
DDX55-201ENST00000238146 PRCPP42785 496 aa17.45■□□□□ 0.38
DDX55-201ENST00000238146 MAGEA9P43362 315 aa17.45■□□□□ 0.38
DDX55-201ENST00000238146 IL17AQ16552 155 aa17.45■□□□□ 0.38
DDX55-201ENST00000238146 PAPD7Q5XG87 772 aaKnown RBP17.45■□□□□ 0.38
DDX55-201ENST00000238146 AFAP1L1Q8TED9 768 aa17.45■□□□□ 0.38
DDX55-201ENST00000238146 SDR42E1Q8WUS8 393 aa17.45■□□□□ 0.38
DDX55-201ENST00000238146 DNAJC7Q99615 494 aa17.45■□□□□ 0.38
DDX55-201ENST00000238146 BRMS1Q9HCU9 246 aa17.45■□□□□ 0.38
DDX55-201ENST00000238146 WDR59Q6PJI9 974 aa17.45■□□□□ 0.38
DDX55-201ENST00000238146 PRDM11Q9NQV5 511 aa17.45■□□□□ 0.38
DDX55-201ENST00000238146 LUC7L2Q9Y383 392 aaKnown RBP17.45■□□□□ 0.38
DDX55-201ENST00000238146 MYH3P11055 1940 aa17.45■□□□□ 0.38
DDX55-201ENST00000238146 PARP1P09874 1014 aaKnown RBP17.44■□□□□ 0.38
DDX55-201ENST00000238146 MCM3P25205 808 aa17.44■□□□□ 0.38
DDX55-201ENST00000238146 BCAMP50895 628 aa17.44■□□□□ 0.38
DDX55-201ENST00000238146 MAP9Q49MG5 647 aa17.44■□□□□ 0.38
DDX55-201ENST00000238146 CCDC122Q5T0U0 273 aa17.44■□□□□ 0.38
DDX55-201ENST00000238146 GOLGA6L1Q8N7Z2 621 aa17.44■□□□□ 0.38
DDX55-201ENST00000238146 MB21D1Q8N884 522 aa17.44■□□□□ 0.38
DDX55-201ENST00000238146 ZSCAN10Q96SZ4 725 aaPredicted RBP17.44■□□□□ 0.38
DDX55-201ENST00000238146 H7C1D1 291 aa17.44■□□□□ 0.38
DDX55-201ENST00000238146 RPN1P04843 607 aaKnown RBP17.44■□□□□ 0.38
DDX55-201ENST00000238146 COG1Q8WTW3 980 aa17.44■□□□□ 0.38
DDX55-201ENST00000238146 RIN2Q8WYP3 895 aaPredicted RBP17.44■□□□□ 0.38
DDX55-201ENST00000238146 PLEKHA4Q9H4M7 779 aa17.44■□□□□ 0.38
DDX55-201ENST00000238146 ANAPC4Q9UJX5 808 aa17.44■□□□□ 0.38
DDX55-201ENST00000238146 BCORQ6W2J9 1755 aa17.44■□□□□ 0.38
DDX55-201ENST00000238146 TARSL2A2RTX5 802 aaKnown RBP17.44■□□□□ 0.38
DDX55-201ENST00000238146 TRIM49BA6NDI0 452 aa17.44■□□□□ 0.38
DDX55-201ENST00000238146 CORO7P57737 925 aa17.44■□□□□ 0.38
DDX55-201ENST00000238146 TROAPQ12815 778 aa17.44■□□□□ 0.38
DDX55-201ENST00000238146 CATIPQ7Z7H3 387 aa17.44■□□□□ 0.38
DDX55-201ENST00000238146 ADGRA1Q86SQ6 560 aa17.44■□□□□ 0.38
DDX55-201ENST00000238146 CAPZA3Q96KX2 299 aa17.44■□□□□ 0.38
DDX55-201ENST00000238146 RMND1Q9NWS8 449 aa17.44■□□□□ 0.38
DDX55-201ENST00000238146 LRP2BPQ9P2M1 347 aa17.44■□□□□ 0.38
DDX55-201ENST00000238146 DISP2A7MBM2 1401 aa17.43■□□□□ 0.38
DDX55-201ENST00000238146 ANKRD65E5RJM6 399 aa17.43■□□□□ 0.38
DDX55-201ENST00000238146 PPFIA4O75335 1185 aa17.43■□□□□ 0.38
DDX55-201ENST00000238146 IFIT1BQ5T764 474 aaKnown RBP17.43■□□□□ 0.38
DDX55-201ENST00000238146 PLCD3Q8N3E9 789 aa17.43■□□□□ 0.38
DDX55-201ENST00000238146 ZNF507Q8TCN5 953 aa17.43■□□□□ 0.38
DDX55-201ENST00000238146 PIGBQ92521 554 aa17.43■□□□□ 0.38
DDX55-201ENST00000238146 GDAP1L1Q96MZ0 367 aa17.43■□□□□ 0.38
DDX55-201ENST00000238146 PYM1Q9BRP8 204 aaKnown RBP17.43■□□□□ 0.38
DDX55-201ENST00000238146 CAPN11Q9UMQ6 739 aa17.43■□□□□ 0.38
DDX55-201ENST00000238146 A0A1W2PQC6 194 aa17.43■□□□□ 0.38
DDX55-201ENST00000238146 LGALS16A8MUM7 142 aa17.43■□□□□ 0.38
DDX55-201ENST00000238146 ZMYND10O75800 440 aa17.43■□□□□ 0.38
DDX55-201ENST00000238146 RBM28Q9NW13 759 aaKnown RBP17.43■□□□□ 0.38
DDX55-201ENST00000238146 SOS2Q07890 1332 aaPredicted RBP17.42■□□□□ 0.38
DDX55-201ENST00000238146 MCM7P33993 719 aa17.42■□□□□ 0.38
DDX55-201ENST00000238146 STIM1Q13586 685 aa17.42■□□□□ 0.38
DDX55-201ENST00000238146 PIK3AP1Q6ZUJ8 805 aa17.42■□□□□ 0.38
DDX55-201ENST00000238146 PACS2Q86VP3 889 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms