RNA–Protein interactions for RNA: ENST00000226218.8

VTN-201, Transcript of vitronectin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTN, Length 2,149 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-201ENST00000226218 PNPLA7Q6ZV29 1317 aa17.42■□□□□ 0.38
VTN-201ENST00000226218 PRKAB2O43741 272 aa17.42■□□□□ 0.38
VTN-201ENST00000226218 ATP2C1P98194 919 aaPredicted RBP17.42■□□□□ 0.38
VTN-201ENST00000226218 PAK1Q13153 545 aa17.42■□□□□ 0.38
VTN-201ENST00000226218 NPY5RQ15761 445 aa17.42■□□□□ 0.38
VTN-201ENST00000226218 MAGEB6Q8N7X4 407 aa17.42■□□□□ 0.38
VTN-201ENST00000226218 CNNM1Q9NRU3 951 aa17.42■□□□□ 0.38
VTN-201ENST00000226218 VPS54Q9P1Q0 977 aa17.42■□□□□ 0.38
VTN-201ENST00000226218 ANKRD18BA2A2Z9 1011 aa17.41■□□□□ 0.38
VTN-201ENST00000226218 GTPBP6O43824 516 aaPredicted RBP17.41■□□□□ 0.38
VTN-201ENST00000226218 CTSWP56202 376 aa17.41■□□□□ 0.38
VTN-201ENST00000226218 AKAP17AQ02040 695 aaKnown RBP17.41■□□□□ 0.38
VTN-201ENST00000226218 PPP2R5BQ15173 497 aa17.41■□□□□ 0.38
VTN-201ENST00000226218 RRAGBQ5VZM2 374 aa17.41■□□□□ 0.38
VTN-201ENST00000226218 WDR59Q6PJI9 974 aa17.41■□□□□ 0.38
VTN-201ENST00000226218 IRF2BP1Q8IU81 584 aa17.41■□□□□ 0.38
VTN-201ENST00000226218 EFCAB13Q8IY85 973 aa17.41■□□□□ 0.38
VTN-201ENST00000226218 SAR1BQ9Y6B6 198 aa17.41■□□□□ 0.38
VTN-201ENST00000226218 TTC26A0AVF1 554 aa17.41■□□□□ 0.38
VTN-201ENST00000226218 ENC1O14682 589 aa17.41■□□□□ 0.38
VTN-201ENST00000226218 RRP12Q5JTH9 1297 aaKnown RBP17.41■□□□□ 0.38
VTN-201ENST00000226218 ZNF658Q5TYW1 1059 aaPredicted RBP17.41■□□□□ 0.38
VTN-201ENST00000226218 ZNF507Q8TCN5 953 aa17.41■□□□□ 0.38
VTN-201ENST00000226218 NELFBQ8WX92 580 aa17.41■□□□□ 0.38
VTN-201ENST00000226218 STAMQ92783 540 aa17.41■□□□□ 0.38
VTN-201ENST00000226218 BLZF1Q9H2G9 400 aa17.41■□□□□ 0.38
VTN-201ENST00000226218 BRMS1Q9HCU9 246 aa17.41■□□□□ 0.38
VTN-201ENST00000226218 A0A1W2PQC6 194 aa17.4■□□□□ 0.38
VTN-201ENST00000226218 ERICH2A1L162 156 aa17.4■□□□□ 0.38
VTN-201ENST00000226218 PRPF3O43395 683 aaKnown RBP17.4■□□□□ 0.38
VTN-201ENST00000226218 MYBL2P10244 700 aa17.4■□□□□ 0.38
VTN-201ENST00000226218 STIM1Q13586 685 aa17.4■□□□□ 0.38
VTN-201ENST00000226218 LCORLQ8N3X6 602 aa17.4■□□□□ 0.38
VTN-201ENST00000226218 SPATA5Q8NB90 893 aa17.4■□□□□ 0.38
VTN-201ENST00000226218 OR8K1Q8NGG5 319 aa17.4■□□□□ 0.38
VTN-201ENST00000226218 NUP133Q8WUM0 1156 aa17.4■□□□□ 0.38
VTN-201ENST00000226218 RIN2Q8WYP3 895 aaPredicted RBP17.4■□□□□ 0.38
VTN-201ENST00000226218 PLEKHA4Q9H4M7 779 aa17.4■□□□□ 0.38
VTN-201ENST00000226218 IQSEC3Q9UPP2 1182 aaPredicted RBP17.4■□□□□ 0.38
VTN-201ENST00000226218 GNAT2P19087 354 aa17.39■□□□□ 0.38
VTN-201ENST00000226218 NLRP10Q86W26 655 aa17.39■□□□□ 0.38
VTN-201ENST00000226218 ANKRD20A12PQ8NF67 263 aa17.39■□□□□ 0.38
VTN-201ENST00000226218 ZCRB1Q8TBF4 217 aaKnown RBP17.39■□□□□ 0.38
VTN-201ENST00000226218 CABLES1Q8TDN4 633 aa17.39■□□□□ 0.38
VTN-201ENST00000226218 JRKLQ9Y4A0 524 aa17.39■□□□□ 0.38
VTN-201ENST00000226218 RTL9Q8NET4 1388 aa17.39■□□□□ 0.37
VTN-201ENST00000226218 DUOX1Q9NRD9 1551 aa17.39■□□□□ 0.37
VTN-201ENST00000226218 SRGAP2O75044 1071 aa17.39■□□□□ 0.37
VTN-201ENST00000226218 XBP1P17861 261 aa17.39■□□□□ 0.37
VTN-201ENST00000226218 GGCXP38435 758 aa17.39■□□□□ 0.37
VTN-201ENST00000226218 UBXN1Q04323 297 aa17.39■□□□□ 0.37
VTN-201ENST00000226218 CKAP4Q07065 602 aaKnown RBP17.39■□□□□ 0.37
VTN-201ENST00000226218 MAP3K12Q12852 859 aa17.39■□□□□ 0.37
VTN-201ENST00000226218 MEA1Q16626 185 aa17.39■□□□□ 0.37
VTN-201ENST00000226218 DNAJC21Q5F1R6 531 aaKnown RBP17.39■□□□□ 0.37
VTN-201ENST00000226218 GIGYF2Q6Y7W6 1299 aaKnown RBP17.39■□□□□ 0.37
VTN-201ENST00000226218 CCNI2Q6ZMN8 369 aaPredicted RBP17.39■□□□□ 0.37
VTN-201ENST00000226218 MB21D1Q8N884 522 aa17.39■□□□□ 0.37
VTN-201ENST00000226218 LPIN2Q92539 896 aa17.39■□□□□ 0.37
VTN-201ENST00000226218 PURBQ96QR8 312 aaKnown RBP17.39■□□□□ 0.37
VTN-201ENST00000226218 RNF216Q9NWF9 866 aaPredicted RBP17.39■□□□□ 0.37
VTN-201ENST00000226218 CAPN11Q9UMQ6 739 aa17.39■□□□□ 0.37
VTN-201ENST00000226218 ANKRD65E5RJM6 399 aa17.38■□□□□ 0.37
VTN-201ENST00000226218 RASGRF1Q13972 1273 aa17.38■□□□□ 0.37
VTN-201ENST00000226218 PUM3Q15397 648 aaKnown RBP17.38■□□□□ 0.37
VTN-201ENST00000226218 ZNF174Q15697 407 aa17.38■□□□□ 0.37
VTN-201ENST00000226218 IL17AQ16552 155 aa17.38■□□□□ 0.37
VTN-201ENST00000226218 TTC38Q5R3I4 469 aa17.38■□□□□ 0.37
VTN-201ENST00000226218 KIF6Q6ZMV9 814 aa17.38■□□□□ 0.37
VTN-201ENST00000226218 SELENOOQ9BVL4 669 aa17.38■□□□□ 0.37
VTN-201ENST00000226218 NUP98P52948 1817 aa17.38■□□□□ 0.37
VTN-201ENST00000226218 A0A087WUV0 522 aaPredicted RBP17.38■□□□□ 0.37
VTN-201ENST00000226218 LGALS16A8MUM7 142 aa17.38■□□□□ 0.37
VTN-201ENST00000226218 PDE2AO00408 941 aaPredicted RBP17.38■□□□□ 0.37
VTN-201ENST00000226218 PRDM1O75626 825 aa17.38■□□□□ 0.37
VTN-201ENST00000226218 PARP1P09874 1014 aaKnown RBP17.38■□□□□ 0.37
VTN-201ENST00000226218 GUCY2CP25092 1073 aa17.38■□□□□ 0.37
VTN-201ENST00000226218 TDO2P48775 406 aa17.38■□□□□ 0.37
VTN-201ENST00000226218 PTGDRQ13258 359 aa17.38■□□□□ 0.37
VTN-201ENST00000226218 TADA2BQ86TJ2 420 aa17.38■□□□□ 0.37
VTN-201ENST00000226218 SUGP1Q8IWZ8 645 aaKnown RBP17.38■□□□□ 0.37
VTN-201ENST00000226218 AENQ8WTP8 325 aaKnown RBP17.38■□□□□ 0.37
VTN-201ENST00000226218 SMARCC1Q92922 1105 aaPredicted RBP17.38■□□□□ 0.37
VTN-201ENST00000226218 PYM1Q9BRP8 204 aaKnown RBP17.38■□□□□ 0.37
VTN-201ENST00000226218 TTYH3Q9C0H2 523 aa17.38■□□□□ 0.37
VTN-201ENST00000226218 RNF41Q9H4P4 317 aaPredicted RBP17.38■□□□□ 0.37
VTN-201ENST00000226218 TFR2Q9UP52 801 aa17.38■□□□□ 0.37
VTN-201ENST00000226218 RREB1Q92766 1687 aa17.37■□□□□ 0.37
VTN-201ENST00000226218 TNKSO95271 1327 aa17.37■□□□□ 0.37
VTN-201ENST00000226218 PDS5AQ29RF7 1337 aaKnown RBP17.37■□□□□ 0.37
VTN-201ENST00000226218 ANO9A1A5B4 782 aa17.37■□□□□ 0.37
VTN-201ENST00000226218 H7C1D1 291 aa17.37■□□□□ 0.37
VTN-201ENST00000226218 PRCPP42785 496 aa17.37■□□□□ 0.37
VTN-201ENST00000226218 CCDC122Q5T0U0 273 aa17.37■□□□□ 0.37
VTN-201ENST00000226218 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.37■□□□□ 0.37
VTN-201ENST00000226218 JAKMIP2Q96AA8 810 aa17.37■□□□□ 0.37
VTN-201ENST00000226218 NACAP1Q9BZK3 213 aa17.37■□□□□ 0.37
VTN-201ENST00000226218 TOMM22Q9NS69 142 aa17.37■□□□□ 0.37
VTN-201ENST00000226218 GDAQ9Y2T3 454 aa17.37■□□□□ 0.37
VTN-201ENST00000226218 SLC4A4Q9Y6R1 1079 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms