RNA–Protein interactions for RNA: ENST00000225842.3

CCL1-201, Transcript of C-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCL1, Length 592 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1-201ENST00000225842 LRRC14Q15048 493 aa9.24□□□□□ -0.93
CCL1-201ENST00000225842 DDR2Q16832 855 aa9.24□□□□□ -0.93
CCL1-201ENST00000225842 RNF187Q5TA31 235 aaPredicted RBP9.24□□□□□ -0.93
CCL1-201ENST00000225842 LARP1BQ659C4 914 aaKnown RBP9.24□□□□□ -0.93
CCL1-201ENST00000225842 LRP10Q7Z4F1 713 aa9.24□□□□□ -0.93
CCL1-201ENST00000225842 FAM35AQ86V20 835 aa9.24□□□□□ -0.93
CCL1-201ENST00000225842 LILRB2Q8N423 598 aa9.24□□□□□ -0.93
CCL1-201ENST00000225842 ZCRB1Q8TBF4 217 aaKnown RBP9.24□□□□□ -0.93
CCL1-201ENST00000225842 LACRTQ9GZZ8 138 aa9.24□□□□□ -0.93
CCL1-201ENST00000225842 PIM2Q9P1W9 311 aa9.24□□□□□ -0.93
CCL1-201ENST00000225842 MSRB2Q9Y3D2 182 aa9.24□□□□□ -0.93
CCL1-201ENST00000225842 CNTNAP1P78357 1384 aa9.24□□□□□ -0.93
CCL1-201ENST00000225842 PALLDQ8WX93 1383 aa9.24□□□□□ -0.93
CCL1-201ENST00000225842 HSPA8P11142 646 aaKnown RBP9.23□□□□□ -0.93
CCL1-201ENST00000225842 ARNTP27540 789 aa9.23□□□□□ -0.93
CCL1-201ENST00000225842 PCSK7Q16549 785 aa9.23□□□□□ -0.93
CCL1-201ENST00000225842 DALRD3Q5D0E6 543 aaKnown RBP9.23□□□□□ -0.93
CCL1-201ENST00000225842 DIEXFQ68CQ4 756 aaKnown RBP9.23□□□□□ -0.93
CCL1-201ENST00000225842 VN1R5Q7Z5H4 357 aa9.23□□□□□ -0.93
CCL1-201ENST00000225842 GAL3ST3Q96A11 431 aa9.23□□□□□ -0.93
CCL1-201ENST00000225842 DCAF5Q96JK2 942 aa9.23□□□□□ -0.93
CCL1-201ENST00000225842 CCDC113Q9H0I3 377 aa9.23□□□□□ -0.93
CCL1-201ENST00000225842 TNKS2Q9H2K2 1166 aa9.23□□□□□ -0.93
CCL1-201ENST00000225842 FANCLQ9NW38 375 aa9.23□□□□□ -0.93
CCL1-201ENST00000225842 DACH1Q9UI36 760 aa9.23□□□□□ -0.93
CCL1-201ENST00000225842 ZNRF3Q9ULT6 936 aa9.23□□□□□ -0.93
CCL1-201ENST00000225842 SOX13Q9UN79 622 aa9.23□□□□□ -0.93
CCL1-201ENST00000225842 MAPK8IP1Q9UQF2 711 aa9.23□□□□□ -0.93
CCL1-201ENST00000225842 PIK3C2AO00443 1686 aa9.23□□□□□ -0.93
CCL1-201ENST00000225842 PTPRAP18433 802 aa9.22□□□□□ -0.93
CCL1-201ENST00000225842 KCNA3P22001 575 aa9.22□□□□□ -0.93
CCL1-201ENST00000225842 PCBP4P57723 403 aaKnown RBP9.22□□□□□ -0.93
CCL1-201ENST00000225842 IGBP1P78318 339 aa9.22□□□□□ -0.93
CCL1-201ENST00000225842 PTPN11Q06124 597 aaPredicted RBP9.22□□□□□ -0.93
CCL1-201ENST00000225842 IFRD2Q12894 506 aaPredicted RBP9.22□□□□□ -0.93
CCL1-201ENST00000225842 PPP2R5EQ16537 467 aa9.22□□□□□ -0.93
CCL1-201ENST00000225842 MPRIPQ6WCQ1 1025 aa9.22□□□□□ -0.93
CCL1-201ENST00000225842 FILIP1Q7Z7B0 1213 aa9.22□□□□□ -0.93
CCL1-201ENST00000225842 LSRQ86X29 649 aaPredicted RBP9.22□□□□□ -0.93
CCL1-201ENST00000225842 CRIPAKQ8N1N5 446 aa9.22□□□□□ -0.93
CCL1-201ENST00000225842 OR6P1Q8NGX9 317 aa9.22□□□□□ -0.93
CCL1-201ENST00000225842 KCNB2Q92953 911 aa9.22□□□□□ -0.93
CCL1-201ENST00000225842 LTV1Q96GA3 475 aaPredicted RBP9.22□□□□□ -0.93
CCL1-201ENST00000225842 GMCL1Q96IK5 515 aa9.22□□□□□ -0.93
CCL1-201ENST00000225842 SH2B1Q9NRF2 756 aaPredicted RBP9.22□□□□□ -0.93
CCL1-201ENST00000225842 TRIM33Q9UPN9 1127 aa9.22□□□□□ -0.93
CCL1-201ENST00000225842 PCDHB14Q9Y5E9 798 aa9.22□□□□□ -0.93
CCL1-201ENST00000225842 TTC21AQ8NDW8 1320 aa9.22□□□□□ -0.93
CCL1-201ENST00000225842 CDC45O75419 566 aa9.21□□□□□ -0.94
CCL1-201ENST00000225842 IBSPP21815 317 aaPredicted RBP9.21□□□□□ -0.94
CCL1-201ENST00000225842 PERM1Q5SV97 790 aa9.21□□□□□ -0.94
CCL1-201ENST00000225842 REXO1Q8N1G1 1221 aaKnown RBP9.21□□□□□ -0.94
CCL1-201ENST00000225842 MICAL1Q8TDZ2 1067 aa9.21□□□□□ -0.94
CCL1-201ENST00000225842 SMG9Q9H0W8 520 aaKnown RBP9.21□□□□□ -0.94
CCL1-201ENST00000225842 CLSPNQ9HAW4 1339 aa9.21□□□□□ -0.94
CCL1-201ENST00000225842 NFAT5O94916 1531 aa9.21□□□□□ -0.94
CCL1-201ENST00000225842 KAT6BQ8WYB5 2073 aa9.2□□□□□ -0.94
CCL1-201ENST00000225842 LY75O60449 1722 aa9.2□□□□□ -0.94
CCL1-201ENST00000225842 ESYT3A0FGR9 886 aa9.2□□□□□ -0.94
CCL1-201ENST00000225842 PDPK1O15530 556 aa9.2□□□□□ -0.94
CCL1-201ENST00000225842 ESRRAP11474 423 aaPredicted RBP9.2□□□□□ -0.94
CCL1-201ENST00000225842 TMF1P82094 1093 aa9.2□□□□□ -0.94
CCL1-201ENST00000225842 PLEKHG4Q58EX7 1191 aa9.2□□□□□ -0.94
CCL1-201ENST00000225842 ELMSAN1Q6PJG2 1045 aa9.2□□□□□ -0.94
CCL1-201ENST00000225842 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.2□□□□□ -0.94
CCL1-201ENST00000225842 RUFY4Q6ZNE9 571 aa9.2□□□□□ -0.94
CCL1-201ENST00000225842 SMARCC1Q92922 1105 aaPredicted RBP9.2□□□□□ -0.94
CCL1-201ENST00000225842 TRERF1Q96PN7 1200 aa9.2□□□□□ -0.94
CCL1-201ENST00000225842 EMILIN2Q9BXX0 1053 aa9.2□□□□□ -0.94
CCL1-201ENST00000225842 AAASQ9NRG9 546 aa9.2□□□□□ -0.94
CCL1-201ENST00000225842 IFT57Q9NWB7 429 aa9.2□□□□□ -0.94
CCL1-201ENST00000225842 NAGPAQ9UK23 515 aa9.2□□□□□ -0.94
CCL1-201ENST00000225842 SLC6A14Q9UN76 642 aa9.2□□□□□ -0.94
CCL1-201ENST00000225842 POLR3KQ9Y2Y1 108 aaPredicted RBP9.2□□□□□ -0.94
CCL1-201ENST00000225842 CDC14CA4D256 554 aa9.19□□□□□ -0.94
CCL1-201ENST00000225842 GFRA3O60609 400 aa9.19□□□□□ -0.94
CCL1-201ENST00000225842 RAB11FIP3O75154 756 aa9.19□□□□□ -0.94
CCL1-201ENST00000225842 IMPDH2P12268 514 aa9.19□□□□□ -0.94
CCL1-201ENST00000225842 MAP2K1Q02750 393 aaPredicted RBP9.19□□□□□ -0.94
CCL1-201ENST00000225842 RPL6Q02878 288 aaKnown RBP9.19□□□□□ -0.94
CCL1-201ENST00000225842 FXNQ16595 210 aa9.19□□□□□ -0.94
CCL1-201ENST00000225842 ZNF468Q5VIY5 522 aaPredicted RBP9.19□□□□□ -0.94
CCL1-201ENST00000225842 MAP1SQ66K74 1059 aaPredicted RBP9.19□□□□□ -0.94
CCL1-201ENST00000225842 COL4A3BPQ9Y5P4 624 aa9.19□□□□□ -0.94
CCL1-201ENST00000225842 CENPJQ9HC77 1338 aaPredicted RBP9.19□□□□□ -0.94
CCL1-201ENST00000225842 C2CD2LO14523 706 aa9.18□□□□□ -0.94
CCL1-201ENST00000225842 SIN3BO75182 1162 aa9.18□□□□□ -0.94
CCL1-201ENST00000225842 RASSF7Q02833 373 aa9.18□□□□□ -0.94
CCL1-201ENST00000225842 ZNF252P-AS1Q0IIN9 211 aa9.18□□□□□ -0.94
CCL1-201ENST00000225842 RASGRF1Q13972 1273 aa9.18□□□□□ -0.94
CCL1-201ENST00000225842 IKBKEQ14164 716 aa9.18□□□□□ -0.94
CCL1-201ENST00000225842 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.18□□□□□ -0.94
CCL1-201ENST00000225842 LINC00116Q8NCU8 138 aa9.18□□□□□ -0.94
CCL1-201ENST00000225842 APPBP2Q92624 585 aa9.18□□□□□ -0.94
CCL1-201ENST00000225842 RGPD5Q99666 1765 aa9.18□□□□□ -0.94
CCL1-201ENST00000225842 PCGF6Q9BYE7 350 aa9.18□□□□□ -0.94
CCL1-201ENST00000225842 ZC3H12CQ9C0D7 883 aaKnown RBP9.18□□□□□ -0.94
CCL1-201ENST00000225842 ADAM19Q9H013 955 aa9.18□□□□□ -0.94
CCL1-201ENST00000225842 ANTXR1Q9H6X2 564 aa9.18□□□□□ -0.94
CCL1-201ENST00000225842 TNRC6CQ9HCJ0 1690 aaKnown RBP9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms