RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 RNASE9P60153 205 aaKnown RBP17.03■□□□□ 0.32
EFNB1-201ENST00000204961 TROAPQ12815 778 aa17.03■□□□□ 0.32
EFNB1-201ENST00000204961 SMC1AQ14683 1233 aaKnown RBP17.03■□□□□ 0.32
EFNB1-201ENST00000204961 PDE11AQ9HCR9 933 aa17.03■□□□□ 0.32
EFNB1-201ENST00000204961 SPATA1Q5VX52 437 aa17.03■□□□□ 0.32
EFNB1-201ENST00000204961 SMCR8Q8TEV9 937 aaPredicted RBP17.03■□□□□ 0.32
EFNB1-201ENST00000204961 ZHX3Q9H4I2 956 aa17.03■□□□□ 0.32
EFNB1-201ENST00000204961 TBC1D7Q9P0N9 293 aa17.03■□□□□ 0.32
EFNB1-201ENST00000204961 ADGRG1Q9Y653 693 aa17.03■□□□□ 0.32
EFNB1-201ENST00000204961 DUSP10Q9Y6W6 482 aa17.03■□□□□ 0.32
EFNB1-201ENST00000204961 STX10O60499 249 aa17.02■□□□□ 0.32
EFNB1-201ENST00000204961 NTSR2O95665 410 aa17.02■□□□□ 0.32
EFNB1-201ENST00000204961 TMTC2Q8N394 836 aa17.02■□□□□ 0.32
EFNB1-201ENST00000204961 FBXL16Q8N461 479 aa17.02■□□□□ 0.32
EFNB1-201ENST00000204961 KCNJ18B7U540 433 aa17.02■□□□□ 0.31
EFNB1-201ENST00000204961 GNPATO15228 680 aa17.02■□□□□ 0.31
EFNB1-201ENST00000204961 CCP110O43303 1012 aa17.02■□□□□ 0.31
EFNB1-201ENST00000204961 ZNF18P17022 549 aa17.02■□□□□ 0.31
EFNB1-201ENST00000204961 GNAT2P19087 354 aa17.02■□□□□ 0.31
EFNB1-201ENST00000204961 HIBADHP31937 336 aaKnown RBP17.02■□□□□ 0.31
EFNB1-201ENST00000204961 KCNJ12Q14500 433 aa17.02■□□□□ 0.31
EFNB1-201ENST00000204961 USP17L2Q6R6M4 530 aa17.02■□□□□ 0.31
EFNB1-201ENST00000204961 IQUBQ8NA54 791 aa17.02■□□□□ 0.31
EFNB1-201ENST00000204961 PNKPQ96T60 521 aa17.02■□□□□ 0.31
EFNB1-201ENST00000204961 RIOK1Q9BRS2 568 aaKnown RBP17.02■□□□□ 0.31
EFNB1-201ENST00000204961 DCP1AQ9NPI6 582 aaPredicted RBP17.02■□□□□ 0.31
EFNB1-201ENST00000204961 B4DLN1 442 aa17.01■□□□□ 0.31
EFNB1-201ENST00000204961 PPP1R3GB7ZBB8 358 aa17.01■□□□□ 0.31
EFNB1-201ENST00000204961 NAP1L1P55209 391 aaKnown RBP17.01■□□□□ 0.31
EFNB1-201ENST00000204961 NOA1Q8NC60 698 aaKnown RBP17.01■□□□□ 0.31
EFNB1-201ENST00000204961 SMARCAL1Q9NZC9 954 aa17.01■□□□□ 0.31
EFNB1-201ENST00000204961 FRMPD2Q68DX3 1309 aaPredicted RBP17.01■□□□□ 0.31
EFNB1-201ENST00000204961 TSPY3P0CV98 308 aa17.01■□□□□ 0.31
EFNB1-201ENST00000204961 TSPY8P0CW00 308 aa17.01■□□□□ 0.31
EFNB1-201ENST00000204961 SCG2P13521 617 aa17.01■□□□□ 0.31
EFNB1-201ENST00000204961 ERVK-24P63145 666 aa17.01■□□□□ 0.31
EFNB1-201ENST00000204961 ARID5AQ03989 594 aa17.01■□□□□ 0.31
EFNB1-201ENST00000204961 CC2D1AQ6P1N0 951 aaPredicted RBP17.01■□□□□ 0.31
EFNB1-201ENST00000204961 PNMA1Q8ND90 353 aa17.01■□□□□ 0.31
EFNB1-201ENST00000204961 BIN2Q9UBW5 565 aaPredicted RBP17.01■□□□□ 0.31
EFNB1-201ENST00000204961 TECP42680 631 aa17.01■□□□□ 0.31
EFNB1-201ENST00000204961 HNRNPH2P55795 449 aaKnown RBP17.01■□□□□ 0.31
EFNB1-201ENST00000204961 CAGE1Q8TC20 777 aa17.01■□□□□ 0.31
EFNB1-201ENST00000204961 PHF20Q9BVI0 1012 aa17.01■□□□□ 0.31
EFNB1-201ENST00000204961 RNF26Q9BY78 433 aaPredicted RBP17.01■□□□□ 0.31
EFNB1-201ENST00000204961 TRPM3Q9HCF6 1732 aaPredicted RBP17.01■□□□□ 0.31
EFNB1-201ENST00000204961 BAZ2AQ9UIF9 1905 aaKnown RBP17■□□□□ 0.31
EFNB1-201ENST00000204961 CXCR5P32302 372 aa17■□□□□ 0.31
EFNB1-201ENST00000204961 RPS8P62241 208 aaKnown RBP17■□□□□ 0.31
EFNB1-201ENST00000204961 ALX1Q15699 326 aa17■□□□□ 0.31
EFNB1-201ENST00000204961 TAF3Q5VWG9 929 aa17■□□□□ 0.31
EFNB1-201ENST00000204961 PAXIP1Q6ZW49 1069 aaPredicted RBP17■□□□□ 0.31
EFNB1-201ENST00000204961 KIAA1328Q86T90 577 aa17■□□□□ 0.31
EFNB1-201ENST00000204961 SH3RF3Q8TEJ3 882 aaPredicted RBP17■□□□□ 0.31
EFNB1-201ENST00000204961 TRIM21P19474 475 aaKnown RBP17■□□□□ 0.31
EFNB1-201ENST00000204961 TXKP42681 527 aa17■□□□□ 0.31
EFNB1-201ENST00000204961 CACNB1Q02641 598 aaPredicted RBP17■□□□□ 0.31
EFNB1-201ENST00000204961 PAK1Q13153 545 aa17■□□□□ 0.31
EFNB1-201ENST00000204961 LRRC41Q15345 812 aa17■□□□□ 0.31
EFNB1-201ENST00000204961 LONRF2Q1L5Z9 754 aa17■□□□□ 0.31
EFNB1-201ENST00000204961 DNAJC21Q5F1R6 531 aaKnown RBP17■□□□□ 0.31
EFNB1-201ENST00000204961 TMTC3Q6ZXV5 915 aa17■□□□□ 0.31
EFNB1-201ENST00000204961 KRT26Q7Z3Y9 468 aa17■□□□□ 0.31
EFNB1-201ENST00000204961 RIN2Q8WYP3 895 aaPredicted RBP17■□□□□ 0.31
EFNB1-201ENST00000204961 GOLGA1Q92805 767 aa17■□□□□ 0.31
EFNB1-201ENST00000204961 CRNKL1Q9BZJ0 848 aaKnown RBP17■□□□□ 0.31
EFNB1-201ENST00000204961 ZNF219Q9P2Y4 722 aaPredicted RBP17■□□□□ 0.31
EFNB1-201ENST00000204961 ZNF185O15231 689 aa16.99■□□□□ 0.31
EFNB1-201ENST00000204961 MARCH6O60337 910 aa16.99■□□□□ 0.31
EFNB1-201ENST00000204961 TBC1D8O95759 1140 aa16.99■□□□□ 0.31
EFNB1-201ENST00000204961 FCER1AP12319 257 aa16.99■□□□□ 0.31
EFNB1-201ENST00000204961 COPB1P53618 953 aaKnown RBP16.99■□□□□ 0.31
EFNB1-201ENST00000204961 TRMT1LQ7Z2T5 733 aaKnown RBP16.99■□□□□ 0.31
EFNB1-201ENST00000204961 ZNF444Q8N0Y2 327 aaPredicted RBP16.99■□□□□ 0.31
EFNB1-201ENST00000204961 SLC39A2Q9NP94 309 aa16.99■□□□□ 0.31
EFNB1-201ENST00000204961 AGPAT5Q9NUQ2 364 aa16.99■□□□□ 0.31
EFNB1-201ENST00000204961 ADD3Q9UEY8 706 aaKnown RBP16.99■□□□□ 0.31
EFNB1-201ENST00000204961 PHLPP2Q6ZVD8 1323 aa16.99■□□□□ 0.31
EFNB1-201ENST00000204961 EFCAB8A8MWE9 144 aa16.99■□□□□ 0.31
EFNB1-201ENST00000204961 CCNT1O60563 726 aaKnown RBP16.99■□□□□ 0.31
EFNB1-201ENST00000204961 RPN1P04843 607 aaKnown RBP16.99■□□□□ 0.31
EFNB1-201ENST00000204961 SARSP49591 514 aaKnown RBP16.99■□□□□ 0.31
EFNB1-201ENST00000204961 ASIC1P78348 528 aa16.99■□□□□ 0.31
EFNB1-201ENST00000204961 TSR1Q2NL82 804 aaKnown RBP16.99■□□□□ 0.31
EFNB1-201ENST00000204961 ABCB6Q9NP58 842 aa16.99■□□□□ 0.31
EFNB1-201ENST00000204961 MRFAP1Q9Y605 127 aa16.99■□□□□ 0.31
EFNB1-201ENST00000204961 RIMBP2O15034 1052 aa16.99■□□□□ 0.31
EFNB1-201ENST00000204961 MFAP3LO75121 409 aa16.99■□□□□ 0.31
EFNB1-201ENST00000204961 MTIF2P46199 727 aaKnown RBP16.99■□□□□ 0.31
EFNB1-201ENST00000204961 SYCP1Q15431 976 aa16.99■□□□□ 0.31
EFNB1-201ENST00000204961 ANKRD20A12PQ8NF67 263 aa16.99■□□□□ 0.31
EFNB1-201ENST00000204961 C8orf37Q96NL8 207 aa16.99■□□□□ 0.31
EFNB1-201ENST00000204961 NLRP3Q96P20 1036 aa16.99■□□□□ 0.31
EFNB1-201ENST00000204961 TANGO6Q9C0B7 1094 aa16.99■□□□□ 0.31
EFNB1-201ENST00000204961 FAM207AQ9NSI2 230 aaPredicted RBP16.99■□□□□ 0.31
EFNB1-201ENST00000204961 AKAP11Q9UKA4 1901 aa16.98■□□□□ 0.31
EFNB1-201ENST00000204961 TTC26A0AVF1 554 aa16.98■□□□□ 0.31
EFNB1-201ENST00000204961 CTAGE9A4FU28 777 aa16.98■□□□□ 0.31
EFNB1-201ENST00000204961 MAP3K9P80192 1104 aa16.98■□□□□ 0.31
EFNB1-201ENST00000204961 NFIXQ14938 502 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms