RNA–Protein interactions for RNA: ENST00000183605.9

CLDN18-201, Transcript of claudin 18, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLDN18, Length 3,520 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18-201ENST00000183605 DMGDHQ9UI17 866 aaKnown RBP11.23□□□□□ -0.61
CLDN18-201ENST00000183605 PPP1R12AO14974 1030 aaPredicted RBP11.22□□□□□ -0.61
CLDN18-201ENST00000183605 IFFO1Q0D2I5 559 aa11.22□□□□□ -0.61
CLDN18-201ENST00000183605 NLRP14Q86W24 1093 aa11.22□□□□□ -0.61
CLDN18-201ENST00000183605 PARP9Q8IXQ6 854 aa11.22□□□□□ -0.61
CLDN18-201ENST00000183605 CCDC13Q8IYE1 715 aa11.22□□□□□ -0.61
CLDN18-201ENST00000183605 ESYT3A0FGR9 886 aa11.22□□□□□ -0.61
CLDN18-201ENST00000183605 UBE2Q2LH0YL09 131 aa11.22□□□□□ -0.61
CLDN18-201ENST00000183605 BACH1O14867 736 aa11.22□□□□□ -0.61
CLDN18-201ENST00000183605 SKAP2O75563 359 aaPredicted RBP11.22□□□□□ -0.61
CLDN18-201ENST00000183605 SLC8A1P32418 973 aa11.22□□□□□ -0.61
CLDN18-201ENST00000183605 APBA1Q02410 837 aa11.22□□□□□ -0.61
CLDN18-201ENST00000183605 PAK2Q13177 524 aa11.22□□□□□ -0.61
CLDN18-201ENST00000183605 AMOTQ4VCS5 1084 aa11.22□□□□□ -0.61
CLDN18-201ENST00000183605 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.22□□□□□ -0.61
CLDN18-201ENST00000183605 SYMPKQ92797 1274 aaKnown RBP11.22□□□□□ -0.61
CLDN18-201ENST00000183605 NFU1Q9UMS0 254 aa11.22□□□□□ -0.61
CLDN18-201ENST00000183605 hCG_1642624A0A1W2PR95 340 aa11.22□□□□□ -0.61
CLDN18-201ENST00000183605 PPP1R37O75864 691 aa11.22□□□□□ -0.61
CLDN18-201ENST00000183605 CLTAP09496 248 aa11.22□□□□□ -0.61
CLDN18-201ENST00000183605 CCDC178Q5BJE1 867 aa11.22□□□□□ -0.61
CLDN18-201ENST00000183605 EMBQ6PCB8 327 aa11.22□□□□□ -0.61
CLDN18-201ENST00000183605 MB21D2Q8IYB1 491 aaPredicted RBP11.22□□□□□ -0.61
CLDN18-201ENST00000183605 CACNA2D3Q8IZS8 1091 aa11.22□□□□□ -0.61
CLDN18-201ENST00000183605 APPBP2Q92624 585 aa11.22□□□□□ -0.61
CLDN18-201ENST00000183605 PAGE5Q96GU1 130 aa11.22□□□□□ -0.61
CLDN18-201ENST00000183605 RNPC3Q96LT9 517 aaKnown RBP11.22□□□□□ -0.61
CLDN18-201ENST00000183605 GSDMAQ96QA5 445 aa11.22□□□□□ -0.61
CLDN18-201ENST00000183605 IFIH1Q9BYX4 1025 aaKnown RBP11.22□□□□□ -0.61
CLDN18-201ENST00000183605 TANGO6Q9C0B7 1094 aa11.22□□□□□ -0.61
CLDN18-201ENST00000183605 EPN3Q9H201 632 aa11.22□□□□□ -0.61
CLDN18-201ENST00000183605 EPB41L5Q9HCM4 733 aa11.22□□□□□ -0.61
CLDN18-201ENST00000183605 RBM28Q9NW13 759 aaKnown RBP11.22□□□□□ -0.61
CLDN18-201ENST00000183605 SMARCAL1Q9NZC9 954 aa11.22□□□□□ -0.61
CLDN18-201ENST00000183605 VPS54Q9P1Q0 977 aa11.22□□□□□ -0.61
CLDN18-201ENST00000183605 STIM2Q9P246 746 aa11.22□□□□□ -0.61
CLDN18-201ENST00000183605 EID1Q9Y6B2 187 aa11.22□□□□□ -0.61
CLDN18-201ENST00000183605 NHSL1Q5SYE7 1610 aa11.22□□□□□ -0.61
CLDN18-201ENST00000183605 PSMD14O00487 310 aa11.21□□□□□ -0.61
CLDN18-201ENST00000183605 CD44P16070 742 aaKnown RBP11.21□□□□□ -0.61
CLDN18-201ENST00000183605 HDLBPQ00341 1268 aaKnown RBP11.21□□□□□ -0.61
CLDN18-201ENST00000183605 AP1ARQ63HQ0 302 aa11.21□□□□□ -0.61
CLDN18-201ENST00000183605 TRIM58Q8NG06 486 aa11.21□□□□□ -0.61
CLDN18-201ENST00000183605 SMCR8Q8TEV9 937 aaPredicted RBP11.21□□□□□ -0.61
CLDN18-201ENST00000183605 HDAC7Q8WUI4 952 aa11.21□□□□□ -0.61
CLDN18-201ENST00000183605 TAF4BQ92750 862 aa11.21□□□□□ -0.61
CLDN18-201ENST00000183605 HAUS2Q9NVX0 235 aa11.21□□□□□ -0.61
CLDN18-201ENST00000183605 USP6P35125 1406 aa11.21□□□□□ -0.61
CLDN18-201ENST00000183605 CSB-PGBD3P0DP91 1061 aa11.21□□□□□ -0.62
CLDN18-201ENST00000183605 PDHBP11177 359 aa11.21□□□□□ -0.62
CLDN18-201ENST00000183605 TYW1BQ6NUM6 668 aa11.21□□□□□ -0.62
CLDN18-201ENST00000183605 HIBCHQ6NVY1 386 aaPredicted RBP11.21□□□□□ -0.62
CLDN18-201ENST00000183605 TAX1BP1Q86VP1 789 aa11.21□□□□□ -0.62
CLDN18-201ENST00000183605 STAG1Q8WVM7 1258 aa11.21□□□□□ -0.62
CLDN18-201ENST00000183605 TCP11Q8WWU5 503 aa11.21□□□□□ -0.62
CLDN18-201ENST00000183605 MAP3K14Q99558 947 aa11.21□□□□□ -0.62
CLDN18-201ENST00000183605 SPATS2LQ9NUQ6 558 aaKnown RBP11.21□□□□□ -0.62
CLDN18-201ENST00000183605 RMND1Q9NWS8 449 aa11.21□□□□□ -0.62
CLDN18-201ENST00000183605 LRWD1Q9UFC0 647 aa11.21□□□□□ -0.62
CLDN18-201ENST00000183605 TNRQ92752 1358 aa11.21□□□□□ -0.62
CLDN18-201ENST00000183605 NUTM2BA6NNL0 878 aaPredicted RBP11.21□□□□□ -0.62
CLDN18-201ENST00000183605 NUTM2EB1AL46 878 aaPredicted RBP11.21□□□□□ -0.62
CLDN18-201ENST00000183605 GCOM1H8Y6P7 765 aaPredicted RBP11.21□□□□□ -0.62
CLDN18-201ENST00000183605 AGPSO00116 658 aa11.21□□□□□ -0.62
CLDN18-201ENST00000183605 SHOX2O60902 331 aaPredicted RBP11.21□□□□□ -0.62
CLDN18-201ENST00000183605 MYZAPP0CAP1 466 aa11.21□□□□□ -0.62
CLDN18-201ENST00000183605 AMPD2Q01433 879 aa11.21□□□□□ -0.62
CLDN18-201ENST00000183605 WTAPQ15007 396 aa11.21□□□□□ -0.62
CLDN18-201ENST00000183605 LRRC24Q50LG9 513 aa11.21□□□□□ -0.62
CLDN18-201ENST00000183605 CACNA2D4Q7Z3S7 1137 aa11.21□□□□□ -0.62
CLDN18-201ENST00000183605 ZNF526Q8TF50 670 aaPredicted RBP11.21□□□□□ -0.62
CLDN18-201ENST00000183605 RAPGEF4Q8WZA2 1011 aa11.21□□□□□ -0.62
CLDN18-201ENST00000183605 ZIM3Q96PE6 472 aa11.21□□□□□ -0.62
CLDN18-201ENST00000183605 PLIN2Q99541 437 aa11.21□□□□□ -0.62
CLDN18-201ENST00000183605 MMRN2Q9H8L6 949 aa11.21□□□□□ -0.62
CLDN18-201ENST00000183605 FBXO2Q9UK22 296 aaPredicted RBP11.21□□□□□ -0.62
CLDN18-201ENST00000183605 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.21□□□□□ -0.62
CLDN18-201ENST00000183605 NRKQ7Z2Y5 1582 aa11.2□□□□□ -0.62
CLDN18-201ENST00000183605 PSMA7O14818 248 aa11.2□□□□□ -0.62
CLDN18-201ENST00000183605 ERCC3P19447 782 aa11.2□□□□□ -0.62
CLDN18-201ENST00000183605 ZAP70P43403 619 aa11.2□□□□□ -0.62
CLDN18-201ENST00000183605 SMTNP53814 917 aa11.2□□□□□ -0.62
CLDN18-201ENST00000183605 ANTXR2P58335 489 aa11.2□□□□□ -0.62
CLDN18-201ENST00000183605 TCP11X2Q5H9J9 407 aa11.2□□□□□ -0.62
CLDN18-201ENST00000183605 KLHL7Q8IXQ5 586 aa11.2□□□□□ -0.62
CLDN18-201ENST00000183605 SPATA4Q8NEY3 305 aa11.2□□□□□ -0.62
CLDN18-201ENST00000183605 TSGA10Q9BZW7 698 aa11.2□□□□□ -0.62
CLDN18-201ENST00000183605 PUS7LQ9H0K6 701 aaKnown RBP11.2□□□□□ -0.62
CLDN18-201ENST00000183605 CPSF2Q9P2I0 782 aaKnown RBP11.2□□□□□ -0.62
CLDN18-201ENST00000183605 HYOU1Q9Y4L1 999 aa11.2□□□□□ -0.62
CLDN18-201ENST00000183605 SRPRBQ9Y5M8 271 aaKnown RBP11.2□□□□□ -0.62
CLDN18-201ENST00000183605 DUSP10Q9Y6W6 482 aa11.2□□□□□ -0.62
CLDN18-201ENST00000183605 HEXIM1O94992 359 aaKnown RBP11.2□□□□□ -0.62
CLDN18-201ENST00000183605 FSBPO95073 299 aa11.2□□□□□ -0.62
CLDN18-201ENST00000183605 MOCS3O95396 460 aa11.2□□□□□ -0.62
CLDN18-201ENST00000183605 PARP1P09874 1014 aaKnown RBP11.2□□□□□ -0.62
CLDN18-201ENST00000183605 UBLCP1Q8WVY7 318 aaPredicted RBP11.2□□□□□ -0.62
CLDN18-201ENST00000183605 TMEM87BQ96K49 555 aa11.2□□□□□ -0.62
CLDN18-201ENST00000183605 ACTR5Q9H9F9 607 aaPredicted RBP11.2□□□□□ -0.62
CLDN18-201ENST00000183605 TCP1P17987 556 aaKnown RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms