RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 MYO6Q9UM54 1294 aa15.84■□□□□ 0.13
USH1C-201ENST00000005226 CHD4Q14839 1912 aa15.84■□□□□ 0.13
USH1C-201ENST00000005226 PRCPP42785 496 aa15.84■□□□□ 0.13
USH1C-201ENST00000005226 USP5P45974 858 aa15.84■□□□□ 0.13
USH1C-201ENST00000005226 PMS1P54277 932 aaKnown RBP15.84■□□□□ 0.13
USH1C-201ENST00000005226 PDXDC2PQ6P474 469 aa15.84■□□□□ 0.13
USH1C-201ENST00000005226 ZNF34Q8IZ26 560 aa15.84■□□□□ 0.13
USH1C-201ENST00000005226 TNFRSF25Q93038 417 aa15.84■□□□□ 0.13
USH1C-201ENST00000005226 CAPZA3Q96KX2 299 aa15.84■□□□□ 0.13
USH1C-201ENST00000005226 TTC26A0AVF1 554 aa15.83■□□□□ 0.13
USH1C-201ENST00000005226 PP2D1A8MPX8 630 aa15.83■□□□□ 0.13
USH1C-201ENST00000005226 ANKRD65E5RJM6 399 aa15.83■□□□□ 0.13
USH1C-201ENST00000005226 TROAPQ12815 778 aa15.83■□□□□ 0.13
USH1C-201ENST00000005226 PAK1Q13153 545 aa15.83■□□□□ 0.13
USH1C-201ENST00000005226 MUM1L1Q5H9M0 696 aa15.83■□□□□ 0.13
USH1C-201ENST00000005226 CYP26C1Q6V0L0 522 aa15.83■□□□□ 0.13
USH1C-201ENST00000005226 IQUBQ8NA54 791 aa15.83■□□□□ 0.13
USH1C-201ENST00000005226 RASGRP4Q8TDF6 673 aa15.83■□□□□ 0.13
USH1C-201ENST00000005226 PAPPAQ13219 1627 aa15.83■□□□□ 0.12
USH1C-201ENST00000005226 ERLIN1O75477 346 aa15.83■□□□□ 0.12
USH1C-201ENST00000005226 NLRP5P59047 1200 aa15.83■□□□□ 0.12
USH1C-201ENST00000005226 CHRNDQ07001 517 aa15.83■□□□□ 0.12
USH1C-201ENST00000005226 IRF2BP1Q8IU81 584 aa15.83■□□□□ 0.12
USH1C-201ENST00000005226 GPIHBP1Q8IV16 184 aa15.83■□□□□ 0.12
USH1C-201ENST00000005226 EPN1Q9Y6I3 576 aaPredicted RBP15.83■□□□□ 0.12
USH1C-201ENST00000005226 ACTN2P35609 894 aa15.82■□□□□ 0.12
USH1C-201ENST00000005226 ATP2C1P98194 919 aaPredicted RBP15.82■□□□□ 0.12
USH1C-201ENST00000005226 PLEKHG2Q9H7P9 1386 aa15.82■□□□□ 0.12
USH1C-201ENST00000005226 TOGARAM1Q9Y4F4 1720 aa15.82■□□□□ 0.12
USH1C-201ENST00000005226 MYH2Q9UKX2 1941 aa15.82■□□□□ 0.12
USH1C-201ENST00000005226 SLIT2O94813 1529 aa15.82■□□□□ 0.12
USH1C-201ENST00000005226 RPN1P04843 607 aaKnown RBP15.82■□□□□ 0.12
USH1C-201ENST00000005226 AMPD2Q01433 879 aa15.82■□□□□ 0.12
USH1C-201ENST00000005226 MMS19Q96T76 1030 aa15.82■□□□□ 0.12
USH1C-201ENST00000005226 RWDD2AQ9UIY3 292 aa15.82■□□□□ 0.12
USH1C-201ENST00000005226 RTL9Q8NET4 1388 aa15.82■□□□□ 0.12
USH1C-201ENST00000005226 LRRC10BA6NIK2 292 aa15.81■□□□□ 0.12
USH1C-201ENST00000005226 USP17L12C9JPN9 530 aa15.81■□□□□ 0.12
USH1C-201ENST00000005226 USP17L21D6R901 530 aa15.81■□□□□ 0.12
USH1C-201ENST00000005226 ATP1A1P05023 1023 aaKnown RBP15.81■□□□□ 0.12
USH1C-201ENST00000005226 GSPT2Q8IYD1 628 aaKnown RBP15.81■□□□□ 0.12
USH1C-201ENST00000005226 GOLGA5Q8TBA6 731 aa15.81■□□□□ 0.12
USH1C-201ENST00000005226 RIN2Q8WYP3 895 aaPredicted RBP15.81■□□□□ 0.12
USH1C-201ENST00000005226 CCDC51Q96ER9 411 aa15.81■□□□□ 0.12
USH1C-201ENST00000005226 MTMR7Q9Y216 660 aa15.81■□□□□ 0.12
USH1C-201ENST00000005226 MYH6P13533 1939 aa15.81■□□□□ 0.12
USH1C-201ENST00000005226 MYO1CO00159 1063 aa15.81■□□□□ 0.12
USH1C-201ENST00000005226 SEMA3EO15041 775 aa15.81■□□□□ 0.12
USH1C-201ENST00000005226 NDUFA10O95299 355 aa15.81■□□□□ 0.12
USH1C-201ENST00000005226 PARP1P09874 1014 aaKnown RBP15.81■□□□□ 0.12
USH1C-201ENST00000005226 FECHP22830 423 aa15.81■□□□□ 0.12
USH1C-201ENST00000005226 KLK7P49862 253 aa15.81■□□□□ 0.12
USH1C-201ENST00000005226 TMTC3Q6ZXV5 915 aa15.81■□□□□ 0.12
USH1C-201ENST00000005226 BRMS1Q9HCU9 246 aa15.81■□□□□ 0.12
USH1C-201ENST00000005226 ITIH6Q6UXX5 1313 aa15.81■□□□□ 0.12
USH1C-201ENST00000005226 GTPBP6O43824 516 aaPredicted RBP15.81■□□□□ 0.12
USH1C-201ENST00000005226 CYP2D6P10635 497 aa15.81■□□□□ 0.12
USH1C-201ENST00000005226 IGHMBP2P38935 993 aaKnown RBP15.81■□□□□ 0.12
USH1C-201ENST00000005226 WHAMMP3Q1A5X7 153 aa15.81■□□□□ 0.12
USH1C-201ENST00000005226 ZNF384Q8TF68 577 aa15.81■□□□□ 0.12
USH1C-201ENST00000005226 GPKOWQ92917 476 aaPredicted RBP eCLIP15.81■□□□□ 0.12
USH1C-201ENST00000005226 RIOK1Q9BRS2 568 aaKnown RBP15.81■□□□□ 0.12
USH1C-201ENST00000005226 POTEB2H3BUK9 544 aa15.8■□□□□ 0.12
USH1C-201ENST00000005226 TNNT3P45378 269 aaPredicted RBP15.8■□□□□ 0.12
USH1C-201ENST00000005226 CT47A1Q5JQC4 288 aaPredicted RBP15.8■□□□□ 0.12
USH1C-201ENST00000005226 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.8■□□□□ 0.12
USH1C-201ENST00000005226 DUSP10Q9Y6W6 482 aa15.8■□□□□ 0.12
USH1C-201ENST00000005226 ZNF185O15231 689 aa15.8■□□□□ 0.12
USH1C-201ENST00000005226 HERVK_113P62684 666 aa15.8■□□□□ 0.12
USH1C-201ENST00000005226 PIP4K2BP78356 416 aa15.8■□□□□ 0.12
USH1C-201ENST00000005226 ZNF658Q5TYW1 1059 aaPredicted RBP15.8■□□□□ 0.12
USH1C-201ENST00000005226 JAG2Q9Y219 1238 aa15.8■□□□□ 0.12
USH1C-201ENST00000005226 CNTNAP5Q8WYK1 1306 aa15.79■□□□□ 0.12
USH1C-201ENST00000005226 RCCD1A6NED2 376 aa15.79■□□□□ 0.12
USH1C-201ENST00000005226 EIF3JO75822 258 aaKnown RBP15.79■□□□□ 0.12
USH1C-201ENST00000005226 MRPS25P82663 173 aaKnown RBP15.79■□□□□ 0.12
USH1C-201ENST00000005226 CTR9Q6PD62 1173 aa15.79■□□□□ 0.12
USH1C-201ENST00000005226 WDR59Q6PJI9 974 aa15.79■□□□□ 0.12
USH1C-201ENST00000005226 IQCA1Q86XH1 822 aa15.79■□□□□ 0.12
USH1C-201ENST00000005226 PSD3Q9NYI0 1048 aa15.79■□□□□ 0.12
USH1C-201ENST00000005226 SHANK3Q9BYB0 1731 aa15.79■□□□□ 0.12
USH1C-201ENST00000005226 NKRFO15226 690 aaKnown RBP eCLIP15.79■□□□□ 0.12
USH1C-201ENST00000005226 HSPA2P54652 639 aa15.79■□□□□ 0.12
USH1C-201ENST00000005226 CCDC122Q5T0U0 273 aa15.79■□□□□ 0.12
USH1C-201ENST00000005226 LEKR1Q6ZMV7 388 aa15.79■□□□□ 0.12
USH1C-201ENST00000005226 MB21D1Q8N884 522 aa15.79■□□□□ 0.12
USH1C-201ENST00000005226 RASSF8Q8NHQ8 419 aa15.79■□□□□ 0.12
USH1C-201ENST00000005226 LACRTQ9GZZ8 138 aa15.79■□□□□ 0.12
USH1C-201ENST00000005226 AGPAT5Q9NUQ2 364 aa15.79■□□□□ 0.12
USH1C-201ENST00000005226 RRP15Q9Y3B9 282 aaKnown RBP15.79■□□□□ 0.12
USH1C-201ENST00000005226 MYH3P11055 1940 aa15.79■□□□□ 0.12
USH1C-201ENST00000005226 FAM205AQ6ZU69 1335 aa15.79■□□□□ 0.12
USH1C-201ENST00000005226 STAT6P42226 847 aa15.78■□□□□ 0.12
USH1C-201ENST00000005226 HSP90B2PQ58FF3 399 aa15.78■□□□□ 0.12
USH1C-201ENST00000005226 ANKRD20A12PQ8NF67 263 aa15.78■□□□□ 0.12
USH1C-201ENST00000005226 OR8K1Q8NGG5 319 aa15.78■□□□□ 0.12
USH1C-201ENST00000005226 FAM204AQ9H8W3 233 aa15.78■□□□□ 0.12
USH1C-201ENST00000005226 BTG4Q9NY30 223 aa15.78■□□□□ 0.12
USH1C-201ENST00000005226 ANAPC4Q9UJX5 808 aa15.78■□□□□ 0.12
USH1C-201ENST00000005226 TIAM2Q8IVF5 1701 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms