RNA–Protein interactions for RNA: ENST00000640916.1

SCARB2-226, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 689 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-226ENST00000640916 FAAP100Q0VG06 881 aa10.12□□□□□ -0.79
SCARB2-226ENST00000640916 CCDC27Q2M243 656 aa10.12□□□□□ -0.79
SCARB2-226ENST00000640916 TMEM31Q5JXX7 168 aa10.12□□□□□ -0.79
SCARB2-226ENST00000640916 PRAMEF19Q5SWL8 479 aa10.12□□□□□ -0.79
SCARB2-226ENST00000640916 SLC4A10Q6U841 1118 aa10.12□□□□□ -0.79
SCARB2-226ENST00000640916 GTF3C2Q8WUA4 911 aaPredicted RBP10.12□□□□□ -0.79
SCARB2-226ENST00000640916 TSHZ2Q9NRE2 1034 aa10.12□□□□□ -0.79
SCARB2-226ENST00000640916 TMOD4Q9NZQ9 345 aa10.12□□□□□ -0.79
SCARB2-226ENST00000640916 BTBD7Q9P203 1132 aa10.12□□□□□ -0.79
SCARB2-226ENST00000640916 PHF24Q9UPV7 400 aa10.12□□□□□ -0.79
SCARB2-226ENST00000640916 WDFY4Q6ZS81 3184 aa10.12□□□□□ -0.79
SCARB2-226ENST00000640916 LRRC37A2A6NM11 1700 aa10.12□□□□□ -0.79
SCARB2-226ENST00000640916 IL16Q14005 1332 aa10.11□□□□□ -0.79
SCARB2-226ENST00000640916 SEMA3EO15041 775 aa10.11□□□□□ -0.79
SCARB2-226ENST00000640916 RAG1P15918 1043 aa10.11□□□□□ -0.79
SCARB2-226ENST00000640916 IGFBP4P22692 258 aa10.11□□□□□ -0.79
SCARB2-226ENST00000640916 EXOSC9Q06265 439 aaKnown RBP10.11□□□□□ -0.79
SCARB2-226ENST00000640916 FAM47AQ5JRC9 791 aa10.11□□□□□ -0.79
SCARB2-226ENST00000640916 TMEM240Q5SV17 173 aa10.11□□□□□ -0.79
SCARB2-226ENST00000640916 OLFML2BQ68BL8 750 aa10.11□□□□□ -0.79
SCARB2-226ENST00000640916 TMEM92Q6UXU6 159 aa10.11□□□□□ -0.79
SCARB2-226ENST00000640916 METTL16Q86W50 562 aaKnown RBP10.11□□□□□ -0.79
SCARB2-226ENST00000640916 CCAR1Q8IX12 1150 aaKnown RBP10.11□□□□□ -0.79
SCARB2-226ENST00000640916 FAM86C2PA6NEL3 165 aa10.1□□□□□ -0.79
SCARB2-226ENST00000640916 TLL1O43897 1013 aa10.1□□□□□ -0.79
SCARB2-226ENST00000640916 COBLO75128 1261 aa10.1□□□□□ -0.79
SCARB2-226ENST00000640916 ASNSP08243 561 aa10.1□□□□□ -0.79
SCARB2-226ENST00000640916 PRKCSHP14314 528 aaPredicted RBP10.1□□□□□ -0.79
SCARB2-226ENST00000640916 ADORA1P30542 326 aa10.1□□□□□ -0.79
SCARB2-226ENST00000640916 MECOMQ03112 1051 aa10.1□□□□□ -0.79
SCARB2-226ENST00000640916 RASGRF1Q13972 1273 aa10.1□□□□□ -0.79
SCARB2-226ENST00000640916 ANKRD33Q7Z3H0 272 aa10.1□□□□□ -0.79
SCARB2-226ENST00000640916 DZIP1Q86YF9 867 aaKnown RBP10.1□□□□□ -0.79
SCARB2-226ENST00000640916 IL27Q8NEV9 243 aa10.1□□□□□ -0.79
SCARB2-226ENST00000640916 HERC5Q9UII4 1024 aaKnown RBP10.1□□□□□ -0.79
SCARB2-226ENST00000640916 YBX2Q9Y2T7 364 aaKnown RBP10.1□□□□□ -0.79
SCARB2-226ENST00000640916 PRRC2BQ5JSZ5 2229 aaKnown RBP10.1□□□□□ -0.79
SCARB2-226ENST00000640916 PDS5AQ29RF7 1337 aaKnown RBP10.09□□□□□ -0.79
SCARB2-226ENST00000640916 PQBP1O60828 265 aaKnown RBP10.09□□□□□ -0.79
SCARB2-226ENST00000640916 GLRX3O76003 335 aaKnown RBP10.09□□□□□ -0.79
SCARB2-226ENST00000640916 TIMP1P01033 207 aa10.09□□□□□ -0.79
SCARB2-226ENST00000640916 MRE11P49959 708 aa10.09□□□□□ -0.79
SCARB2-226ENST00000640916 CCNA1P78396 465 aa10.09□□□□□ -0.79
SCARB2-226ENST00000640916 ATP2B3Q16720 1220 aa10.09□□□□□ -0.79
SCARB2-226ENST00000640916 CCDC102BQ68D86 513 aa10.09□□□□□ -0.79
SCARB2-226ENST00000640916 USP17L2Q6R6M4 530 aa10.09□□□□□ -0.79
SCARB2-226ENST00000640916 LBX2Q6XYB7 198 aa10.09□□□□□ -0.79
SCARB2-226ENST00000640916 CATSPERGQ6ZRH7 1159 aa10.09□□□□□ -0.79
SCARB2-226ENST00000640916 ZGPATQ8N5A5 531 aaKnown RBP10.09□□□□□ -0.79
SCARB2-226ENST00000640916 C12orf42Q96LP6 360 aa10.09□□□□□ -0.79
SCARB2-226ENST00000640916 TMEM39AQ9NV64 488 aa10.09□□□□□ -0.79
SCARB2-226ENST00000640916 GNL3LQ9NVN8 582 aaKnown RBP10.09□□□□□ -0.79
SCARB2-226ENST00000640916 ABCF2Q9UG63 623 aa10.09□□□□□ -0.79
SCARB2-226ENST00000640916 TBX21Q9UL17 535 aa10.09□□□□□ -0.79
SCARB2-226ENST00000640916 A0A0G2JMZ2 1700 aa10.08□□□□□ -0.8
SCARB2-226ENST00000640916 A0A1W2PQ45 241 aaPredicted RBP10.08□□□□□ -0.8
SCARB2-226ENST00000640916 A0A1W2PQY0 241 aa10.08□□□□□ -0.8
SCARB2-226ENST00000640916 ERC2O15083 957 aa10.08□□□□□ -0.8
SCARB2-226ENST00000640916 GDF11O95390 407 aa10.08□□□□□ -0.8
SCARB2-226ENST00000640916 ADORA2AP29274 412 aa10.08□□□□□ -0.8
SCARB2-226ENST00000640916 WDR78Q5VTH9 848 aa10.08□□□□□ -0.8
SCARB2-226ENST00000640916 SLF2Q8IX21 1173 aa10.08□□□□□ -0.8
SCARB2-226ENST00000640916 SLC44A5Q8NCS7 719 aa10.08□□□□□ -0.8
SCARB2-226ENST00000640916 TOX2Q96NM4 488 aa10.08□□□□□ -0.8
SCARB2-226ENST00000640916 USP44Q9H0E7 712 aa10.08□□□□□ -0.8
SCARB2-226ENST00000640916 NKX2-4Q9H2Z4 354 aa10.08□□□□□ -0.8
SCARB2-226ENST00000640916 CD320Q9NPF0 282 aa10.08□□□□□ -0.8
SCARB2-226ENST00000640916 PI4KBQ9UBF8 816 aa10.08□□□□□ -0.8
SCARB2-226ENST00000640916 ZBTB21Q9ULJ3 1066 aa10.08□□□□□ -0.8
SCARB2-226ENST00000640916 SPDYE16A6NNV3 312 aaPredicted RBP10.07□□□□□ -0.8
SCARB2-226ENST00000640916 USP17L15C9J2P7 530 aa10.07□□□□□ -0.8
SCARB2-226ENST00000640916 USP17L13C9JLJ4 530 aa10.07□□□□□ -0.8
SCARB2-226ENST00000640916 USP17L11C9JVI0 530 aa10.07□□□□□ -0.8
SCARB2-226ENST00000640916 USP17L18D6R9N7 530 aa10.07□□□□□ -0.8
SCARB2-226ENST00000640916 USP17L22D6RA61 530 aa10.07□□□□□ -0.8
SCARB2-226ENST00000640916 USP17L17D6RBQ6 530 aa10.07□□□□□ -0.8
SCARB2-226ENST00000640916 USP17L19D6RCP7 530 aa10.07□□□□□ -0.8
SCARB2-226ENST00000640916 USP17L20D6RJB6 530 aa10.07□□□□□ -0.8
SCARB2-226ENST00000640916 PI4K2BG5E9Z4 385 aa10.07□□□□□ -0.8
SCARB2-226ENST00000640916 MAP4K4O95819 1239 aaPredicted RBP10.07□□□□□ -0.8
SCARB2-226ENST00000640916 ACRP10323 421 aa10.07□□□□□ -0.8
SCARB2-226ENST00000640916 USP17L24Q0WX57 530 aa10.07□□□□□ -0.8
SCARB2-226ENST00000640916 MFSD5Q6N075 450 aa10.07□□□□□ -0.8
SCARB2-226ENST00000640916 CCDC129Q6ZRS4 1044 aa10.07□□□□□ -0.8
SCARB2-226ENST00000640916 ZNF365Q70YC5 407 aa10.07□□□□□ -0.8
SCARB2-226ENST00000640916 SH3RF3Q8TEJ3 882 aaPredicted RBP10.07□□□□□ -0.8
SCARB2-226ENST00000640916 NSUN4Q96CB9 384 aaKnown RBP10.07□□□□□ -0.8
SCARB2-226ENST00000640916 CWC22Q9HCG8 908 aaKnown RBP10.07□□□□□ -0.8
SCARB2-226ENST00000640916 IVNS1ABPQ9Y6Y0 642 aa10.07□□□□□ -0.8
SCARB2-226ENST00000640916 MYO5AQ9Y4I1 1855 aaKnown RBP10.06□□□□□ -0.8
SCARB2-226ENST00000640916 PARP14Q460N5 1801 aa10.06□□□□□ -0.8
SCARB2-226ENST00000640916 CIAO1O76071 339 aa10.06□□□□□ -0.8
SCARB2-226ENST00000640916 PGK1P00558 417 aa10.06□□□□□ -0.8
SCARB2-226ENST00000640916 CSF2RAP15509 400 aa10.06□□□□□ -0.8
SCARB2-226ENST00000640916 SPTY2D1Q68D10 685 aaPredicted RBP10.06□□□□□ -0.8
SCARB2-226ENST00000640916 ERICH6Q7L0X2 663 aa10.06□□□□□ -0.8
SCARB2-226ENST00000640916 DPP9Q86TI2 863 aa10.06□□□□□ -0.8
SCARB2-226ENST00000640916 MOV10L1Q9BXT6 1211 aaKnown RBP10.06□□□□□ -0.8
SCARB2-226ENST00000640916 GINM1Q9NU53 330 aa10.06□□□□□ -0.8
SCARB2-226ENST00000640916 SMIM22K7EJ46 135 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms