RNA–Protein interactions for RNA: ENST00000636540.1

SRP54-AS1-205, Transcript of SRP54 antisense RNA 1 (head to head), humanhuman

BASIC

Gene SRP54-AS1, Length 565 nt, Biotype transcribed unitary pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-AS1-205ENST00000636540 USP17L18D6R9N7 530 aa13.22□□□□□ -0.29
SRP54-AS1-205ENST00000636540 USP17L22D6RA61 530 aa13.22□□□□□ -0.29
SRP54-AS1-205ENST00000636540 USP17L17D6RBQ6 530 aa13.22□□□□□ -0.29
SRP54-AS1-205ENST00000636540 USP17L19D6RCP7 530 aa13.22□□□□□ -0.29
SRP54-AS1-205ENST00000636540 USP17L20D6RJB6 530 aa13.22□□□□□ -0.29
SRP54-AS1-205ENST00000636540 PRDM1O75626 825 aa13.22□□□□□ -0.29
SRP54-AS1-205ENST00000636540 ECM2O94769 699 aaPredicted RBP13.22□□□□□ -0.29
SRP54-AS1-205ENST00000636540 HSPD1P10809 573 aaKnown RBP13.22□□□□□ -0.29
SRP54-AS1-205ENST00000636540 EEF2P13639 858 aaKnown RBP13.22□□□□□ -0.29
SRP54-AS1-205ENST00000636540 USP17L24Q0WX57 530 aa13.22□□□□□ -0.29
SRP54-AS1-205ENST00000636540 POTEEQ6S8J3 1075 aa13.22□□□□□ -0.29
SRP54-AS1-205ENST00000636540 CENPQQ7L2Z9 268 aaPredicted RBP13.22□□□□□ -0.29
SRP54-AS1-205ENST00000636540 GTF3C2Q8WUA4 911 aaPredicted RBP13.22□□□□□ -0.29
SRP54-AS1-205ENST00000636540 LPAR1Q92633 364 aa13.22□□□□□ -0.29
SRP54-AS1-205ENST00000636540 IL25Q9H293 177 aa13.22□□□□□ -0.29
SRP54-AS1-205ENST00000636540 RPAP3Q9H6T3 665 aaPredicted RBP13.22□□□□□ -0.29
SRP54-AS1-205ENST00000636540 VCPKMTQ9H867 229 aa13.22□□□□□ -0.29
SRP54-AS1-205ENST00000636540 KANSL2Q9H9L4 492 aa13.22□□□□□ -0.29
SRP54-AS1-205ENST00000636540 MKNK2Q9HBH9 465 aa13.22□□□□□ -0.29
SRP54-AS1-205ENST00000636540 ZNF287Q9HBT7 754 aa13.22□□□□□ -0.29
SRP54-AS1-205ENST00000636540 TXNRD2Q9NNW7 524 aa13.22□□□□□ -0.29
SRP54-AS1-205ENST00000636540 SRRDQ9UH36 339 aa13.22□□□□□ -0.29
SRP54-AS1-205ENST00000636540 MYPNQ86TC9 1320 aa13.21□□□□□ -0.29
SRP54-AS1-205ENST00000636540 RAD50Q92878 1312 aa13.21□□□□□ -0.29
SRP54-AS1-205ENST00000636540 SLC3A2P08195 630 aaKnown RBP13.21□□□□□ -0.29
SRP54-AS1-205ENST00000636540 MFAP1P55081 439 aaKnown RBP13.21□□□□□ -0.29
SRP54-AS1-205ENST00000636540 PRMT2P55345 433 aa13.21□□□□□ -0.29
SRP54-AS1-205ENST00000636540 PDE4BQ07343 736 aa13.21□□□□□ -0.29
SRP54-AS1-205ENST00000636540 CWC27Q6UX04 472 aaKnown RBP13.21□□□□□ -0.29
SRP54-AS1-205ENST00000636540 LBX2Q6XYB7 198 aa13.21□□□□□ -0.29
SRP54-AS1-205ENST00000636540 CATSPERGQ6ZRH7 1159 aa13.21□□□□□ -0.29
SRP54-AS1-205ENST00000636540 ARMC5Q96C12 935 aa13.21□□□□□ -0.29
SRP54-AS1-205ENST00000636540 P2RX7Q99572 595 aaKnown RBP13.21□□□□□ -0.29
SRP54-AS1-205ENST00000636540 TACC3Q9Y6A5 838 aa13.21□□□□□ -0.29
SRP54-AS1-205ENST00000636540 SPDYE16A6NNV3 312 aaPredicted RBP13.2□□□□□ -0.3
SRP54-AS1-205ENST00000636540 TNPO2O14787 897 aaKnown RBP13.2□□□□□ -0.3
SRP54-AS1-205ENST00000636540 WDR46O15213 610 aaKnown RBP13.2□□□□□ -0.3
SRP54-AS1-205ENST00000636540 PEX10O60683 326 aa13.2□□□□□ -0.3
SRP54-AS1-205ENST00000636540 CNMDO75829 334 aa13.2□□□□□ -0.3
SRP54-AS1-205ENST00000636540 FMNL1O95466 1100 aaPredicted RBP13.2□□□□□ -0.3
SRP54-AS1-205ENST00000636540 FGAP02671 866 aa13.2□□□□□ -0.3
SRP54-AS1-205ENST00000636540 PRKCZQ05513 592 aa13.2□□□□□ -0.3
SRP54-AS1-205ENST00000636540 CTDSPL2Q05D32 466 aa13.2□□□□□ -0.3
SRP54-AS1-205ENST00000636540 CEP95Q96GE4 821 aa13.2□□□□□ -0.3
SRP54-AS1-205ENST00000636540 TANGO6Q9C0B7 1094 aa13.2□□□□□ -0.3
SRP54-AS1-205ENST00000636540 NBPF3Q9H094 633 aa13.2□□□□□ -0.3
SRP54-AS1-205ENST00000636540 NYAP2Q9P242 653 aa13.2□□□□□ -0.3
SRP54-AS1-205ENST00000636540 ORC4O43929 436 aa13.19□□□□□ -0.3
SRP54-AS1-205ENST00000636540 ERVK-9P63128 1117 aa13.19□□□□□ -0.3
SRP54-AS1-205ENST00000636540 ERVK-24P63145 666 aa13.19□□□□□ -0.3
SRP54-AS1-205ENST00000636540 ATP2B2Q01814 1243 aa13.19□□□□□ -0.3
SRP54-AS1-205ENST00000636540 SLC9C1Q4G0N8 1177 aa13.19□□□□□ -0.3
SRP54-AS1-205ENST00000636540 TBC1D10CQ8IV04 446 aa13.19□□□□□ -0.3
SRP54-AS1-205ENST00000636540 ZNF444Q8N0Y2 327 aaPredicted RBP13.19□□□□□ -0.3
SRP54-AS1-205ENST00000636540 SPICE1Q8N0Z3 855 aa13.19□□□□□ -0.3
SRP54-AS1-205ENST00000636540 NEDD1Q8NHV4 660 aa13.19□□□□□ -0.3
SRP54-AS1-205ENST00000636540 ZNF333Q96JL9 665 aa13.19□□□□□ -0.3
SRP54-AS1-205ENST00000636540 PAGR1Q9BTK6 254 aa13.19□□□□□ -0.3
SRP54-AS1-205ENST00000636540 GOPCQ9HD26 462 aa13.19□□□□□ -0.3
SRP54-AS1-205ENST00000636540 MTMR4Q9NYA4 1195 aa13.19□□□□□ -0.3
SRP54-AS1-205ENST00000636540 RBPJLQ9UBG7 517 aa13.19□□□□□ -0.3
SRP54-AS1-205ENST00000636540 GABRQQ9UN88 632 aa13.19□□□□□ -0.3
SRP54-AS1-205ENST00000636540 FGRP09769 529 aa13.18□□□□□ -0.3
SRP54-AS1-205ENST00000636540 TSPY3P0CV98 308 aa13.18□□□□□ -0.3
SRP54-AS1-205ENST00000636540 TSPY8P0CW00 308 aa13.18□□□□□ -0.3
SRP54-AS1-205ENST00000636540 HOXD10P28358 340 aa13.18□□□□□ -0.3
SRP54-AS1-205ENST00000636540 SOX10P56693 466 aa13.18□□□□□ -0.3
SRP54-AS1-205ENST00000636540 FAM47AQ5JRC9 791 aa13.18□□□□□ -0.3
SRP54-AS1-205ENST00000636540 DSCC1Q9BVC3 393 aa13.18□□□□□ -0.3
SRP54-AS1-205ENST00000636540 SYNPO2Q9UMS6 1093 aa13.18□□□□□ -0.3
SRP54-AS1-205ENST00000636540 RABGAP1Q9Y3P9 1069 aa13.18□□□□□ -0.3
SRP54-AS1-205ENST00000636540 KIAA0100Q14667 2235 aaKnown RBP13.18□□□□□ -0.3
SRP54-AS1-205ENST00000636540 FRMPD3Q5JV73 1810 aa13.18□□□□□ -0.3
SRP54-AS1-205ENST00000636540 NEDD4P46934 1319 aa13.17□□□□□ -0.3
SRP54-AS1-205ENST00000636540 TSPY2A6NKD2 308 aa13.17□□□□□ -0.3
SRP54-AS1-205ENST00000636540 TTLL1O95922 423 aa13.17□□□□□ -0.3
SRP54-AS1-205ENST00000636540 NDUFB10O96000 172 aa13.17□□□□□ -0.3
SRP54-AS1-205ENST00000636540 CHMLP26374 656 aa13.17□□□□□ -0.3
SRP54-AS1-205ENST00000636540 HAND2P61296 217 aa13.17□□□□□ -0.3
SRP54-AS1-205ENST00000636540 TFAP4Q01664 338 aa13.17□□□□□ -0.3
SRP54-AS1-205ENST00000636540 IRF5Q13568 498 aa13.17□□□□□ -0.3
SRP54-AS1-205ENST00000636540 SKAP1Q86WV1 359 aa13.17□□□□□ -0.3
SRP54-AS1-205ENST00000636540 LRRC47Q8N1G4 583 aaKnown RBP13.17□□□□□ -0.3
SRP54-AS1-205ENST00000636540 GPRC5AQ8NFJ5 357 aa13.17□□□□□ -0.3
SRP54-AS1-205ENST00000636540 RAET1EQ8TD07 263 aa13.17□□□□□ -0.3
SRP54-AS1-205ENST00000636540 SH3TC2Q8TF17 1288 aa13.17□□□□□ -0.3
SRP54-AS1-205ENST00000636540 STAG1Q8WVM7 1258 aa13.17□□□□□ -0.3
SRP54-AS1-205ENST00000636540 PORCNQ9H237 461 aa13.17□□□□□ -0.3
SRP54-AS1-205ENST00000636540 INCENPQ9NQS7 918 aa13.17□□□□□ -0.3
SRP54-AS1-205ENST00000636540 BTBD7Q9P203 1132 aa13.17□□□□□ -0.3
SRP54-AS1-205ENST00000636540 FLOT1O75955 427 aa13.16□□□□□ -0.3
SRP54-AS1-205ENST00000636540 PCP11498 1178 aaKnown RBP13.16□□□□□ -0.3
SRP54-AS1-205ENST00000636540 FLT3LGP49771 235 aa13.16□□□□□ -0.3
SRP54-AS1-205ENST00000636540 FAM83BQ5T0W9 1011 aa13.16□□□□□ -0.3
SRP54-AS1-205ENST00000636540 SLAIN1Q8ND83 568 aa13.16□□□□□ -0.3
SRP54-AS1-205ENST00000636540 GMCL1P1Q8NEA9 526 aa13.16□□□□□ -0.3
SRP54-AS1-205ENST00000636540 SOCS4Q8WXH5 440 aa13.16□□□□□ -0.3
SRP54-AS1-205ENST00000636540 MKL1Q969V6 931 aa13.16□□□□□ -0.3
SRP54-AS1-205ENST00000636540 COA7Q96BR5 231 aa13.16□□□□□ -0.3
SRP54-AS1-205ENST00000636540 ATG4CQ96DT6 458 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms