RNA–Protein interactions for RNA: ENST00000627620.2

SCN8A-209, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-209ENST00000627620 KDM3AQ9Y4C1 1321 aa14.19□□□□□ -0.14
SCN8A-209ENST00000627620 BCAMP50895 628 aa14.19□□□□□ -0.14
SCN8A-209ENST00000627620 LACTBP83111 547 aaPredicted RBP14.19□□□□□ -0.14
SCN8A-209ENST00000627620 PEX26Q7Z412 305 aa14.19□□□□□ -0.14
SCN8A-209ENST00000627620 NOSTRINQ8IVI9 506 aa14.19□□□□□ -0.14
SCN8A-209ENST00000627620 BLIDQ8IZY5 108 aa14.19□□□□□ -0.14
SCN8A-209ENST00000627620 SDR42E1Q8WUS8 393 aa14.19□□□□□ -0.14
SCN8A-209ENST00000627620 PCDHB13Q9Y5F0 798 aa14.19□□□□□ -0.14
SCN8A-209ENST00000627620 PRPF6O94906 941 aaKnown RBP14.18□□□□□ -0.14
SCN8A-209ENST00000627620 BRD1O95696 1058 aa14.18□□□□□ -0.14
SCN8A-209ENST00000627620 PFKFB1P16118 471 aa14.18□□□□□ -0.14
SCN8A-209ENST00000627620 PDE6AP16499 860 aa14.18□□□□□ -0.14
SCN8A-209ENST00000627620 ZBTB38Q8NAP3 1195 aaPredicted RBP14.18□□□□□ -0.14
SCN8A-209ENST00000627620 GTF2A1P52655 376 aaPredicted RBP14.18□□□□□ -0.14
SCN8A-209ENST00000627620 LRMPQ12912 555 aa14.18□□□□□ -0.14
SCN8A-209ENST00000627620 PPP2R5DQ14738 602 aa14.18□□□□□ -0.14
SCN8A-209ENST00000627620 OTUD6AQ7L8S5 288 aa14.18□□□□□ -0.14
SCN8A-209ENST00000627620 NUCKS1Q9H1E3 243 aaKnown RBP14.18□□□□□ -0.14
SCN8A-209ENST00000627620 GNA14O95837 355 aa14.18□□□□□ -0.14
SCN8A-209ENST00000627620 GLG1Q92896 1179 aa14.18□□□□□ -0.14
SCN8A-209ENST00000627620 PODXL2Q9NZ53 605 aa14.18□□□□□ -0.14
SCN8A-209ENST00000627620 SWAP70Q9UH65 585 aa14.18□□□□□ -0.14
SCN8A-209ENST00000627620 TSKSQ9UJT2 592 aa14.18□□□□□ -0.14
SCN8A-209ENST00000627620 FRMPD2Q68DX3 1309 aaPredicted RBP14.18□□□□□ -0.14
SCN8A-209ENST00000627620 CIB2O75838 187 aa14.18□□□□□ -0.14
SCN8A-209ENST00000627620 GSPT1P15170 499 aaKnown RBP14.18□□□□□ -0.14
SCN8A-209ENST00000627620 CFAP221Q4G0U5 840 aa14.18□□□□□ -0.14
SCN8A-209ENST00000627620 GPBP1Q86WP2 473 aa14.18□□□□□ -0.14
SCN8A-209ENST00000627620 CCDC105Q8IYK2 499 aa14.18□□□□□ -0.14
SCN8A-209ENST00000627620 FANCBQ8NB91 859 aa14.18□□□□□ -0.14
SCN8A-209ENST00000627620 WDR70Q9NW82 654 aa14.18□□□□□ -0.14
SCN8A-209ENST00000627620 GOLGA6CA6NDK9 693 aa14.17□□□□□ -0.14
SCN8A-209ENST00000627620 GOLGA6DP0CG33 693 aa14.17□□□□□ -0.14
SCN8A-209ENST00000627620 HSPD1P10809 573 aaKnown RBP14.17□□□□□ -0.14
SCN8A-209ENST00000627620 ELF2Q15723 593 aa14.17□□□□□ -0.14
SCN8A-209ENST00000627620 IFIH1Q9BYX4 1025 aaKnown RBP14.17□□□□□ -0.14
SCN8A-209ENST00000627620 XPO4Q9C0E2 1151 aaKnown RBP14.17□□□□□ -0.14
SCN8A-209ENST00000627620 PSTPIP2Q9H939 334 aa14.17□□□□□ -0.14
SCN8A-209ENST00000627620 GOLGA6AQ9NYA3 693 aa14.17□□□□□ -0.14
SCN8A-209ENST00000627620 M0QZ92 97 aa14.17□□□□□ -0.14
SCN8A-209ENST00000627620 KCNG1Q9UIX4 513 aa14.17□□□□□ -0.14
SCN8A-209ENST00000627620 TECP42680 631 aa14.17□□□□□ -0.14
SCN8A-209ENST00000627620 VPS52Q8N1B4 723 aa14.17□□□□□ -0.14
SCN8A-209ENST00000627620 GABPB2Q8TAK5 448 aaPredicted RBP14.17□□□□□ -0.14
SCN8A-209ENST00000627620 SMCR8Q8TEV9 937 aaPredicted RBP14.17□□□□□ -0.14
SCN8A-209ENST00000627620 STMN2Q93045 179 aa14.17□□□□□ -0.14
SCN8A-209ENST00000627620 NACA2Q9H009 215 aa14.17□□□□□ -0.14
SCN8A-209ENST00000627620 FAM184BQ9ULE4 1060 aa14.17□□□□□ -0.14
SCN8A-209ENST00000627620 TESPA1A2RU30 521 aaPredicted RBP14.17□□□□□ -0.14
SCN8A-209ENST00000627620 NDUFAB1O14561 156 aa14.17□□□□□ -0.14
SCN8A-209ENST00000627620 PPFIBP2Q8ND30 876 aa14.17□□□□□ -0.14
SCN8A-209ENST00000627620 H7C1D1 291 aa14.17□□□□□ -0.14
SCN8A-209ENST00000627620 TTC31Q49AM3 519 aaPredicted RBP14.17□□□□□ -0.14
SCN8A-209ENST00000627620 LRRC24Q50LG9 513 aa14.17□□□□□ -0.14
SCN8A-209ENST00000627620 PRR16Q569H4 304 aa14.17□□□□□ -0.14
SCN8A-209ENST00000627620 C2CD5Q86YS7 1000 aa14.17□□□□□ -0.14
SCN8A-209ENST00000627620 DEPTORQ8TB45 409 aa14.17□□□□□ -0.14
SCN8A-209ENST00000627620 CFAP57Q96MR6 1250 aa14.17□□□□□ -0.14
SCN8A-209ENST00000627620 LSM14BQ9BX40 385 aaKnown RBP14.17□□□□□ -0.14
SCN8A-209ENST00000627620 TNKSO95271 1327 aa14.17□□□□□ -0.14
SCN8A-209ENST00000627620 FAM102BQ5T8I3 360 aa14.16□□□□□ -0.14
SCN8A-209ENST00000627620 CCDC125Q86Z20 511 aa14.16□□□□□ -0.14
SCN8A-209ENST00000627620 TMEM2Q9UHN6 1383 aa14.16□□□□□ -0.14
SCN8A-209ENST00000627620 PFKFB2O60825 505 aa14.16□□□□□ -0.14
SCN8A-209ENST00000627620 ADD1P35611 737 aaKnown RBP14.16□□□□□ -0.14
SCN8A-209ENST00000627620 ADKP55263 362 aaKnown RBP14.16□□□□□ -0.14
SCN8A-209ENST00000627620 PAK2Q13177 524 aa14.16□□□□□ -0.14
SCN8A-209ENST00000627620 RUFY4Q6ZNE9 571 aa14.16□□□□□ -0.14
SCN8A-209ENST00000627620 PNMA1Q8ND90 353 aa14.16□□□□□ -0.14
SCN8A-209ENST00000627620 TBC1D31Q96DN5 1066 aa14.16□□□□□ -0.14
SCN8A-209ENST00000627620 IQCDQ96DY2 449 aa14.16□□□□□ -0.14
SCN8A-209ENST00000627620 PFDN4Q9NQP4 134 aa14.16□□□□□ -0.14
SCN8A-209ENST00000627620 KIAA1468Q9P260 1216 aa14.16□□□□□ -0.14
SCN8A-209ENST00000627620 PCCAP05165 728 aaPredicted RBP14.16□□□□□ -0.14
SCN8A-209ENST00000627620 ATP2B4P23634 1241 aa14.16□□□□□ -0.14
SCN8A-209ENST00000627620 CYP2J2P51589 502 aa14.16□□□□□ -0.14
SCN8A-209ENST00000627620 TNFAIP1Q13829 316 aa14.16□□□□□ -0.14
SCN8A-209ENST00000627620 B4GALNT4Q76KP1 1039 aa14.16□□□□□ -0.14
SCN8A-209ENST00000627620 MYOCDQ8IZQ8 938 aa14.16□□□□□ -0.14
SCN8A-209ENST00000627620 AS3MTQ9HBK9 375 aa14.16□□□□□ -0.14
SCN8A-209ENST00000627620 ZMYM6O95789 1325 aa14.16□□□□□ -0.14
SCN8A-209ENST00000627620 XRCC5P13010 732 aaKnown RBP14.16□□□□□ -0.14
SCN8A-209ENST00000627620 BLMP54132 1417 aaPredicted RBP14.16□□□□□ -0.14
SCN8A-209ENST00000627620 GNPTABQ3T906 1256 aa14.16□□□□□ -0.14
SCN8A-209ENST00000627620 ARHGEF16Q5VV41 709 aa14.16□□□□□ -0.14
SCN8A-209ENST00000627620 IWS1Q96ST2 819 aa14.16□□□□□ -0.14
SCN8A-209ENST00000627620 SSH2Q76I76 1423 aa14.16□□□□□ -0.14
SCN8A-209ENST00000627620 GOLGA6BA6NDN3 693 aa14.16□□□□□ -0.14
SCN8A-209ENST00000627620 LRRC47Q8N1G4 583 aaKnown RBP14.16□□□□□ -0.14
SCN8A-209ENST00000627620 USP28Q96RU2 1077 aa14.16□□□□□ -0.14
SCN8A-209ENST00000627620 TPCN1Q9ULQ1 816 aa14.16□□□□□ -0.14
SCN8A-209ENST00000627620 KCNJ18B7U540 433 aa14.15□□□□□ -0.14
SCN8A-209ENST00000627620 ALAS1P13196 640 aa14.15□□□□□ -0.14
SCN8A-209ENST00000627620 SCNN1DP51172 638 aa14.15□□□□□ -0.14
SCN8A-209ENST00000627620 KCNJ12Q14500 433 aa14.15□□□□□ -0.14
SCN8A-209ENST00000627620 TAOK1Q7L7X3 1001 aa14.15□□□□□ -0.14
SCN8A-209ENST00000627620 CROCCP2Q86T23 111 aa14.15□□□□□ -0.14
SCN8A-209ENST00000627620 TMEM63CQ9P1W3 806 aa14.15□□□□□ -0.14
SCN8A-209ENST00000627620 FAM170AA1A519 330 aa14.15□□□□□ -0.14
SCN8A-209ENST00000627620 GOLGA8HP0CJ92 632 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms