RNA–Protein interactions for RNA: ENST00000626847.2

SMN2-214, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN2, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-214ENST00000626847 FOXK2Q01167 660 aa9.56□□□□□ -0.88
SMN2-214ENST00000626847 MTFR1Q15390 333 aa9.56□□□□□ -0.88
SMN2-214ENST00000626847 ZNF697Q5TEC3 545 aa9.56□□□□□ -0.88
SMN2-214ENST00000626847 TTC19Q6DKK2 380 aaPredicted RBP9.56□□□□□ -0.88
SMN2-214ENST00000626847 NPAS4Q8IUM7 802 aa9.56□□□□□ -0.88
SMN2-214ENST00000626847 ANKRD18AQ8IVF6 992 aa9.56□□□□□ -0.88
SMN2-214ENST00000626847 VPS37AQ8NEZ2 397 aa9.56□□□□□ -0.88
SMN2-214ENST00000626847 FAM76AQ8TAV0 307 aa9.56□□□□□ -0.88
SMN2-214ENST00000626847 ASB16Q96NS5 453 aa9.56□□□□□ -0.88
SMN2-214ENST00000626847 C2orf49Q9BVC5 232 aaPredicted RBP9.56□□□□□ -0.88
SMN2-214ENST00000626847 PRKD2Q9BZL6 878 aa9.56□□□□□ -0.88
SMN2-214ENST00000626847 ZNF446Q9NWS9 450 aa9.56□□□□□ -0.88
SMN2-214ENST00000626847 ARHGEF28Q8N1W1 1705 aaKnown RBP9.56□□□□□ -0.88
SMN2-214ENST00000626847 TULP4Q9NRJ4 1543 aa9.56□□□□□ -0.88
SMN2-214ENST00000626847 COL5A2P05997 1499 aaPredicted RBP9.56□□□□□ -0.88
SMN2-214ENST00000626847 CRB1P82279 1406 aa9.56□□□□□ -0.88
SMN2-214ENST00000626847 ROCK1Q13464 1354 aa9.56□□□□□ -0.88
SMN2-214ENST00000626847 A0A1B0GUA9 196 aa9.56□□□□□ -0.88
SMN2-214ENST00000626847 FAM181BA6NEQ2 426 aa9.56□□□□□ -0.88
SMN2-214ENST00000626847 IL2RAP01589 272 aa9.56□□□□□ -0.88
SMN2-214ENST00000626847 FOSL1P15407 271 aa9.56□□□□□ -0.88
SMN2-214ENST00000626847 ZNF16P17020 682 aaPredicted RBP9.56□□□□□ -0.88
SMN2-214ENST00000626847 MPSTP25325 297 aa9.56□□□□□ -0.88
SMN2-214ENST00000626847 CHMLP26374 656 aa9.56□□□□□ -0.88
SMN2-214ENST00000626847 ELF1P32519 619 aa9.56□□□□□ -0.88
SMN2-214ENST00000626847 GYS2P54840 703 aa9.56□□□□□ -0.88
SMN2-214ENST00000626847 TBC1D8BQ0IIM8 1120 aa9.56□□□□□ -0.88
SMN2-214ENST00000626847 CENPQQ7L2Z9 268 aaPredicted RBP9.56□□□□□ -0.88
SMN2-214ENST00000626847 ELOA2Q8IYF1 753 aaPredicted RBP9.56□□□□□ -0.88
SMN2-214ENST00000626847 RSPH1Q8WYR4 309 aa9.56□□□□□ -0.88
SMN2-214ENST00000626847 CCDC47Q96A33 483 aaKnown RBP9.56□□□□□ -0.88
SMN2-214ENST00000626847 MRRFQ96E11 262 aaKnown RBP9.56□□□□□ -0.88
SMN2-214ENST00000626847 NLRP3Q96P20 1036 aa9.56□□□□□ -0.88
SMN2-214ENST00000626847 TRERF1Q96PN7 1200 aa9.56□□□□□ -0.88
SMN2-214ENST00000626847 BAG1Q99933 345 aaPredicted RBP9.56□□□□□ -0.88
SMN2-214ENST00000626847 ESYT1Q9BSJ8 1104 aa9.56□□□□□ -0.88
SMN2-214ENST00000626847 MAK16Q9BXY0 300 aaKnown RBP9.56□□□□□ -0.88
SMN2-214ENST00000626847 CPDO75976 1380 aa9.55□□□□□ -0.88
SMN2-214ENST00000626847 PRR36Q9H6K5 1346 aa9.55□□□□□ -0.88
SMN2-214ENST00000626847 H7C1W4 665 aa9.55□□□□□ -0.88
SMN2-214ENST00000626847 CDK2AP1O14519 115 aa9.55□□□□□ -0.88
SMN2-214ENST00000626847 ZSCAN9O15535 394 aaPredicted RBP9.55□□□□□ -0.88
SMN2-214ENST00000626847 NDUFB5O43674 189 aa9.55□□□□□ -0.88
SMN2-214ENST00000626847 KRT38O76015 456 aa9.55□□□□□ -0.88
SMN2-214ENST00000626847 SASH1O94885 1247 aa9.55□□□□□ -0.88
SMN2-214ENST00000626847 MSL3P1P0C860 447 aa9.55□□□□□ -0.88
SMN2-214ENST00000626847 XBP1P17861 261 aa9.55□□□□□ -0.88
SMN2-214ENST00000626847 BDNFP23560 247 aa9.55□□□□□ -0.88
SMN2-214ENST00000626847 CBLBQ13191 982 aa9.55□□□□□ -0.88
SMN2-214ENST00000626847 SAFB2Q14151 953 aaKnown RBP eCLIP9.55□□□□□ -0.88
SMN2-214ENST00000626847 ECM1Q16610 540 aa9.55□□□□□ -0.88
SMN2-214ENST00000626847 NUTM2GQ5VZR2 741 aa9.55□□□□□ -0.88
SMN2-214ENST00000626847 GBP6Q6ZN66 633 aa9.55□□□□□ -0.88
SMN2-214ENST00000626847 SEPT14Q6ZU15 432 aa9.55□□□□□ -0.88
SMN2-214ENST00000626847 MICALL1Q8N3F8 863 aa9.55□□□□□ -0.88
SMN2-214ENST00000626847 PHC3Q8NDX5 983 aa9.55□□□□□ -0.88
SMN2-214ENST00000626847 DDX11Q96FC9 970 aa9.55□□□□□ -0.88
SMN2-214ENST00000626847 THUMPD2Q9BTF0 503 aaKnown RBP9.55□□□□□ -0.88
SMN2-214ENST00000626847 SAP130Q9H0E3 1048 aa9.55□□□□□ -0.88
SMN2-214ENST00000626847 LRRC4BQ9NT99 713 aa9.55□□□□□ -0.88
SMN2-214ENST00000626847 FBXO9Q9UK97 447 aaPredicted RBP9.55□□□□□ -0.88
SMN2-214ENST00000626847 CTDP1Q9Y5B0 961 aaPredicted RBP9.55□□□□□ -0.88
SMN2-214ENST00000626847 GOLGA6L10A6NI86 522 aa9.54□□□□□ -0.88
SMN2-214ENST00000626847 POTECB2RU33 542 aa9.54□□□□□ -0.88
SMN2-214ENST00000626847 MEN1O00255 615 aa9.54□□□□□ -0.88
SMN2-214ENST00000626847 RPS6KA5O75582 802 aa9.54□□□□□ -0.88
SMN2-214ENST00000626847 RLBP1P12271 317 aa9.54□□□□□ -0.88
SMN2-214ENST00000626847 ATICP31939 592 aa9.54□□□□□ -0.88
SMN2-214ENST00000626847 COL19A1Q14993 1142 aa9.54□□□□□ -0.88
SMN2-214ENST00000626847 POSTNQ15063 836 aa9.54□□□□□ -0.88
SMN2-214ENST00000626847 C8orf34Q49A92 452 aa9.54□□□□□ -0.88
SMN2-214ENST00000626847 SYNE3Q6ZMZ3 975 aa9.54□□□□□ -0.88
SMN2-214ENST00000626847 ZNF598Q86UK7 904 aaKnown RBP9.54□□□□□ -0.88
SMN2-214ENST00000626847 GAS2L3Q86XJ1 694 aa9.54□□□□□ -0.88
SMN2-214ENST00000626847 FAM114A1Q8IWE2 563 aa9.54□□□□□ -0.88
SMN2-214ENST00000626847 HSCBQ8IWL3 235 aa9.54□□□□□ -0.88
SMN2-214ENST00000626847 NGDNQ8NEJ9 315 aaKnown RBP9.54□□□□□ -0.88
SMN2-214ENST00000626847 SNIP1Q8TAD8 396 aaKnown RBP9.54□□□□□ -0.88
SMN2-214ENST00000626847 NMRK2Q9NPI5 230 aa9.54□□□□□ -0.88
SMN2-214ENST00000626847 QPCTLQ9NXS2 382 aa9.54□□□□□ -0.88
SMN2-214ENST00000626847 CABP1Q9NZU7 370 aa9.54□□□□□ -0.88
SMN2-214ENST00000626847 QSER1Q2KHR3 1735 aa9.53□□□□□ -0.88
SMN2-214ENST00000626847 A0A087WUV0 522 aaPredicted RBP9.53□□□□□ -0.88
SMN2-214ENST00000626847 SERTM1A2A2V5 107 aa9.53□□□□□ -0.88
SMN2-214ENST00000626847 TTC24A2A3L6 582 aaPredicted RBP9.53□□□□□ -0.88
SMN2-214ENST00000626847 PDLIM1O00151 329 aa9.53□□□□□ -0.88
SMN2-214ENST00000626847 WDHD1O75717 1129 aaPredicted RBP9.53□□□□□ -0.88
SMN2-214ENST00000626847 ZIC2O95409 532 aaPredicted RBP9.53□□□□□ -0.88
SMN2-214ENST00000626847 ZNF24P17028 368 aa9.53□□□□□ -0.88
SMN2-214ENST00000626847 NPR3P17342 541 aa9.53□□□□□ -0.88
SMN2-214ENST00000626847 TPP2P29144 1249 aaPredicted RBP9.53□□□□□ -0.88
SMN2-214ENST00000626847 MRPL12P52815 198 aaKnown RBP9.53□□□□□ -0.88
SMN2-214ENST00000626847 CLN3Q13286 438 aa9.53□□□□□ -0.88
SMN2-214ENST00000626847 ALKBH2Q6NS38 261 aa9.53□□□□□ -0.88
SMN2-214ENST00000626847 CLEC17AQ6ZS10 378 aa9.53□□□□□ -0.88
SMN2-214ENST00000626847 UBE2Q1Q7Z7E8 422 aa9.53□□□□□ -0.88
SMN2-214ENST00000626847 LCA5Q86VQ0 697 aa9.53□□□□□ -0.88
SMN2-214ENST00000626847 JAKMIP2Q96AA8 810 aa9.53□□□□□ -0.88
SMN2-214ENST00000626847 RSRC1Q96IZ7 334 aaKnown RBP9.53□□□□□ -0.88
SMN2-214ENST00000626847 CDK5RAP3Q96JB5 506 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms