RNA–Protein interactions for RNA: ENST00000625662.2

CHD2-205, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 5,127 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-205ENST00000625662 KIF5CO60282 957 aa13.16□□□□□ -0.3
CHD2-205ENST00000625662 LRRC47Q8N1G4 583 aaKnown RBP13.16□□□□□ -0.3
CHD2-205ENST00000625662 WRNIP1Q96S55 665 aa13.16□□□□□ -0.3
CHD2-205ENST00000625662 LARP6Q9BRS8 491 aaKnown RBP13.16□□□□□ -0.3
CHD2-205ENST00000625662 ATP6V0A2Q9Y487 856 aa13.16□□□□□ -0.3
CHD2-205ENST00000625662 PAFAH1B1P43034 410 aa13.16□□□□□ -0.3
CHD2-205ENST00000625662 AK2P54819 239 aa13.16□□□□□ -0.3
CHD2-205ENST00000625662 NACA2Q9H009 215 aa13.16□□□□□ -0.3
CHD2-205ENST00000625662 NEXMIFQ5QGS0 1516 aa13.16□□□□□ -0.3
CHD2-205ENST00000625662 DDX39AO00148 427 aaKnown RBP13.16□□□□□ -0.3
CHD2-205ENST00000625662 GIMAP8Q8ND71 665 aaPredicted RBP13.16□□□□□ -0.3
CHD2-205ENST00000625662 SNX29Q8TEQ0 813 aa13.16□□□□□ -0.3
CHD2-205ENST00000625662 CTNNBL1Q8WYA6 563 aaPredicted RBP13.16□□□□□ -0.3
CHD2-205ENST00000625662 CLGNO14967 610 aa13.15□□□□□ -0.3
CHD2-205ENST00000625662 HARSP12081 509 aaKnown RBP13.15□□□□□ -0.3
CHD2-205ENST00000625662 MCM4P33991 863 aa13.15□□□□□ -0.3
CHD2-205ENST00000625662 METTL13Q8N6R0 699 aa13.15□□□□□ -0.3
CHD2-205ENST00000625662 RBM46Q8TBY0 533 aaKnown RBP13.15□□□□□ -0.3
CHD2-205ENST00000625662 TBC1D32Q96NH3 1257 aa13.15□□□□□ -0.3
CHD2-205ENST00000625662 A0A0G2JLW4 131 aa13.15□□□□□ -0.3
CHD2-205ENST00000625662 KMT5BQ4FZB7 885 aa13.15□□□□□ -0.3
CHD2-205ENST00000625662 STRIP1Q5VSL9 837 aa13.15□□□□□ -0.3
CHD2-205ENST00000625662 MIS18BP1Q6P0N0 1132 aa13.15□□□□□ -0.3
CHD2-205ENST00000625662 CCDC155Q8N6L0 562 aa13.15□□□□□ -0.3
CHD2-205ENST00000625662 GOLGA6L9A6NEM1 432 aa13.15□□□□□ -0.3
CHD2-205ENST00000625662 TXKP42681 527 aa13.15□□□□□ -0.3
CHD2-205ENST00000625662 SPC24Q8NBT2 197 aa13.15□□□□□ -0.3
CHD2-205ENST00000625662 MINPP1Q9UNW1 487 aa13.15□□□□□ -0.3
CHD2-205ENST00000625662 MACROD2A1Z1Q3 448 aa13.15□□□□□ -0.31
CHD2-205ENST00000625662 ZNF853P0CG23 659 aa13.15□□□□□ -0.31
CHD2-205ENST00000625662 RXRAP19793 462 aa13.15□□□□□ -0.31
CHD2-205ENST00000625662 MARCKSP29966 332 aaPredicted RBP13.15□□□□□ -0.31
CHD2-205ENST00000625662 ENOX2Q16206 610 aaKnown RBP13.15□□□□□ -0.31
CHD2-205ENST00000625662 GIMAP6Q6P9H5 292 aa13.15□□□□□ -0.31
CHD2-205ENST00000625662 EP400NLQ6ZTU2 488 aa13.15□□□□□ -0.31
CHD2-205ENST00000625662 LMBR1Q8WVP7 490 aa13.15□□□□□ -0.31
CHD2-205ENST00000625662 EAF2Q96CJ1 260 aaPredicted RBP13.15□□□□□ -0.31
CHD2-205ENST00000625662 PARK7Q99497 189 aaKnown RBP13.15□□□□□ -0.31
CHD2-205ENST00000625662 TBC1D2Q9BYX2 928 aa13.15□□□□□ -0.31
CHD2-205ENST00000625662 TM6SF1Q9BZW5 370 aa13.15□□□□□ -0.31
CHD2-205ENST00000625662 HERC5Q9UII4 1024 aaKnown RBP13.15□□□□□ -0.31
CHD2-205ENST00000625662 MST1RQ04912 1400 aa13.14□□□□□ -0.31
CHD2-205ENST00000625662 LMAN1P49257 510 aa13.14□□□□□ -0.31
CHD2-205ENST00000625662 HLFQ16534 295 aa13.14□□□□□ -0.31
CHD2-205ENST00000625662 AXDND1Q5T1B0 1012 aaPredicted RBP13.14□□□□□ -0.31
CHD2-205ENST00000625662 PLA2G4DQ86XP0 818 aa13.14□□□□□ -0.31
CHD2-205ENST00000625662 SDR42E1Q8WUS8 393 aa13.14□□□□□ -0.31
CHD2-205ENST00000625662 RPS6KC1Q96S38 1066 aa13.14□□□□□ -0.31
CHD2-205ENST00000625662 QRICH2Q9H0J4 1663 aa13.14□□□□□ -0.31
CHD2-205ENST00000625662 ZNF174Q15697 407 aa13.14□□□□□ -0.31
CHD2-205ENST00000625662 SYDE2Q5VT97 1194 aa13.14□□□□□ -0.31
CHD2-205ENST00000625662 DIS3L2Q8IYB7 885 aaKnown RBP13.14□□□□□ -0.31
CHD2-205ENST00000625662 TTC16Q8NEE8 873 aa13.14□□□□□ -0.31
CHD2-205ENST00000625662 GOLGA5Q8TBA6 731 aa13.14□□□□□ -0.31
CHD2-205ENST00000625662 RAET1EQ8TD07 263 aa13.14□□□□□ -0.31
CHD2-205ENST00000625662 DCAF4Q8WV16 495 aa13.14□□□□□ -0.31
CHD2-205ENST00000625662 TSNARE1Q96NA8 513 aa13.14□□□□□ -0.31
CHD2-205ENST00000625662 ISCA1Q9BUE6 129 aa13.14□□□□□ -0.31
CHD2-205ENST00000625662 PUS3Q9BZE2 481 aaKnown RBP13.14□□□□□ -0.31
CHD2-205ENST00000625662 PCDHA1Q9Y5I3 950 aa13.14□□□□□ -0.31
CHD2-205ENST00000625662 F13A1P00488 732 aa13.14□□□□□ -0.31
CHD2-205ENST00000625662 NAA15Q9BXJ9 866 aaKnown RBP13.14□□□□□ -0.31
CHD2-205ENST00000625662 TNKSO95271 1327 aa13.14□□□□□ -0.31
CHD2-205ENST00000625662 PHLPP2Q6ZVD8 1323 aa13.14□□□□□ -0.31
CHD2-205ENST00000625662 E7EWF7 191 aa13.14□□□□□ -0.31
CHD2-205ENST00000625662 ZSCAN20P17040 1043 aaPredicted RBP13.14□□□□□ -0.31
CHD2-205ENST00000625662 CYLC1P35663 651 aaPredicted RBP13.14□□□□□ -0.31
CHD2-205ENST00000625662 PRR5LQ6MZQ0 368 aa13.13□□□□□ -0.31
CHD2-205ENST00000625662 FAM227BQ96M60 508 aa13.13□□□□□ -0.31
CHD2-205ENST00000625662 MCM3P25205 808 aa13.13□□□□□ -0.31
CHD2-205ENST00000625662 SNX21Q969T3 373 aa13.13□□□□□ -0.31
CHD2-205ENST00000625662 CNOT7Q9UIV1 285 aaKnown RBP13.13□□□□□ -0.31
CHD2-205ENST00000625662 FEM1BQ9UK73 627 aa13.13□□□□□ -0.31
CHD2-205ENST00000625662 REREQ9P2R6 1566 aa13.13□□□□□ -0.31
CHD2-205ENST00000625662 VWA3AA6NCI4 1184 aa13.13□□□□□ -0.31
CHD2-205ENST00000625662 AKR1B10O60218 316 aa13.13□□□□□ -0.31
CHD2-205ENST00000625662 SASH1O94885 1247 aa13.13□□□□□ -0.31
CHD2-205ENST00000625662 ZNF157P51786 506 aaPredicted RBP13.13□□□□□ -0.31
CHD2-205ENST00000625662 UTP14CQ5TAP6 766 aaKnown RBP13.13□□□□□ -0.31
CHD2-205ENST00000625662 MICALL2Q8IY33 904 aa13.13□□□□□ -0.31
CHD2-205ENST00000625662 TLR3O15455 904 aaKnown RBP13.13□□□□□ -0.31
CHD2-205ENST00000625662 WDR11Q9BZH6 1224 aa13.13□□□□□ -0.31
CHD2-205ENST00000625662 GINM1Q9NU53 330 aa13.13□□□□□ -0.31
CHD2-205ENST00000625662 ELP1O95163 1332 aa13.12□□□□□ -0.31
CHD2-205ENST00000625662 GSTTP1A0A1W2PQM5 241 aa13.12□□□□□ -0.31
CHD2-205ENST00000625662 USP17L10C9JJH3 530 aa13.12□□□□□ -0.31
CHD2-205ENST00000625662 PRPF6O94906 941 aaKnown RBP13.12□□□□□ -0.31
CHD2-205ENST00000625662 DPEP1P16444 411 aa13.12□□□□□ -0.31
CHD2-205ENST00000625662 CHRNA5P30532 468 aa13.12□□□□□ -0.31
CHD2-205ENST00000625662 DPH6Q7L8W6 267 aa13.12□□□□□ -0.31
CHD2-205ENST00000625662 CETN3O15182 167 aa13.12□□□□□ -0.31
CHD2-205ENST00000625662 GDF11O95390 407 aa13.12□□□□□ -0.31
CHD2-205ENST00000625662 GCFC2P16383 781 aaKnown RBP13.12□□□□□ -0.31
CHD2-205ENST00000625662 ADD2P35612 726 aa13.12□□□□□ -0.31
CHD2-205ENST00000625662 MKRN3Q13064 507 aaKnown RBP13.12□□□□□ -0.31
CHD2-205ENST00000625662 SNAPC2Q13487 334 aa13.12□□□□□ -0.31
CHD2-205ENST00000625662 VWA3BQ502W6 1294 aa13.12□□□□□ -0.31
CHD2-205ENST00000625662 TTC14Q96N46 770 aa13.12□□□□□ -0.31
CHD2-205ENST00000625662 PCDHB13Q9Y5F0 798 aa13.12□□□□□ -0.31
CHD2-205ENST00000625662 ADCY9O60503 1353 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms