RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 NUP88Q99567 741 aaPredicted RBP10.31□□□□□ -0.76
HDAC9-229ENST00000622668 RAVER2Q9HCJ3 691 aaKnown RBP10.31□□□□□ -0.76
HDAC9-229ENST00000622668 KCNH4Q9UQ05 1017 aa10.31□□□□□ -0.76
HDAC9-229ENST00000622668 PCP11498 1178 aaKnown RBP10.31□□□□□ -0.76
HDAC9-229ENST00000622668 EIF2AK2P19525 551 aaKnown RBP10.31□□□□□ -0.76
HDAC9-229ENST00000622668 AFMP43652 599 aa10.31□□□□□ -0.76
HDAC9-229ENST00000622668 NBPF12Q5TAG4 269 aaPredicted RBP10.31□□□□□ -0.76
HDAC9-229ENST00000622668 ATG9AQ7Z3C6 839 aa10.31□□□□□ -0.76
HDAC9-229ENST00000622668 FAM160B2Q86V87 743 aa10.31□□□□□ -0.76
HDAC9-229ENST00000622668 DIS3L2Q8IYB7 885 aaKnown RBP10.31□□□□□ -0.76
HDAC9-229ENST00000622668 PRDM5Q9NQX1 630 aaPredicted RBP10.31□□□□□ -0.76
HDAC9-229ENST00000622668 EEF2P13639 858 aaKnown RBP10.31□□□□□ -0.76
HDAC9-229ENST00000622668 ADD1P35611 737 aaKnown RBP10.31□□□□□ -0.76
HDAC9-229ENST00000622668 USP8P40818 1118 aa10.31□□□□□ -0.76
HDAC9-229ENST00000622668 CAMK4Q16566 473 aa10.31□□□□□ -0.76
HDAC9-229ENST00000622668 PRR16Q569H4 304 aa10.31□□□□□ -0.76
HDAC9-229ENST00000622668 SYDE2Q5VT97 1194 aa10.31□□□□□ -0.76
HDAC9-229ENST00000622668 ZNF280CQ8ND82 737 aa10.31□□□□□ -0.76
HDAC9-229ENST00000622668 NSUN4Q96CB9 384 aaKnown RBP10.31□□□□□ -0.76
HDAC9-229ENST00000622668 NAP1L4Q99733 375 aaKnown RBP10.31□□□□□ -0.76
HDAC9-229ENST00000622668 OSBPL5Q9H0X9 879 aaPredicted RBP10.31□□□□□ -0.76
HDAC9-229ENST00000622668 KCNJ14Q9UNX9 436 aa10.31□□□□□ -0.76
HDAC9-229ENST00000622668 ATRNO75882 1429 aa10.31□□□□□ -0.76
HDAC9-229ENST00000622668 USP32Q8NFA0 1604 aa10.31□□□□□ -0.76
HDAC9-229ENST00000622668 ZEB2O60315 1214 aa10.3□□□□□ -0.76
HDAC9-229ENST00000622668 ASIC1P78348 528 aa10.3□□□□□ -0.76
HDAC9-229ENST00000622668 ASPRV1Q53RT3 343 aa10.3□□□□□ -0.76
HDAC9-229ENST00000622668 ZNF589Q86UQ0 364 aaPredicted RBP10.3□□□□□ -0.76
HDAC9-229ENST00000622668 BCL2L12Q9HB09 334 aa10.3□□□□□ -0.76
HDAC9-229ENST00000622668 UTYO14607 1347 aa10.3□□□□□ -0.76
HDAC9-229ENST00000622668 ARHGEF35A5YM69 484 aa10.3□□□□□ -0.76
HDAC9-229ENST00000622668 GLTPD2A6NH11 291 aa10.3□□□□□ -0.76
HDAC9-229ENST00000622668 ENTPD3O75355 529 aa10.3□□□□□ -0.76
HDAC9-229ENST00000622668 CCT6AP40227 531 aaKnown RBP10.3□□□□□ -0.76
HDAC9-229ENST00000622668 CETN1Q12798 172 aa10.3□□□□□ -0.76
HDAC9-229ENST00000622668 PPP2R5BQ15173 497 aa10.3□□□□□ -0.76
HDAC9-229ENST00000622668 PUF60Q9UHX1 559 aaKnown RBP10.3□□□□□ -0.76
HDAC9-229ENST00000622668 USP17L15C9J2P7 530 aa10.3□□□□□ -0.76
HDAC9-229ENST00000622668 USP17L13C9JLJ4 530 aa10.3□□□□□ -0.76
HDAC9-229ENST00000622668 USP17L11C9JVI0 530 aa10.3□□□□□ -0.76
HDAC9-229ENST00000622668 USP17L18D6R9N7 530 aa10.3□□□□□ -0.76
HDAC9-229ENST00000622668 USP17L22D6RA61 530 aa10.3□□□□□ -0.76
HDAC9-229ENST00000622668 USP17L17D6RBQ6 530 aa10.3□□□□□ -0.76
HDAC9-229ENST00000622668 USP17L19D6RCP7 530 aa10.3□□□□□ -0.76
HDAC9-229ENST00000622668 USP17L20D6RJB6 530 aa10.3□□□□□ -0.76
HDAC9-229ENST00000622668 F5H6K3 240 aa10.3□□□□□ -0.76
HDAC9-229ENST00000622668 STAT3P40763 770 aa10.3□□□□□ -0.76
HDAC9-229ENST00000622668 KLRC3Q07444 240 aa10.3□□□□□ -0.76
HDAC9-229ENST00000622668 USP17L24Q0WX57 530 aa10.3□□□□□ -0.76
HDAC9-229ENST00000622668 ENOX2Q16206 610 aaKnown RBP10.3□□□□□ -0.76
HDAC9-229ENST00000622668 FBXO33Q7Z6M2 555 aa10.3□□□□□ -0.76
HDAC9-229ENST00000622668 MAP7D2Q96T17 732 aa10.3□□□□□ -0.76
HDAC9-229ENST00000622668 PSMD1Q99460 953 aa10.3□□□□□ -0.76
HDAC9-229ENST00000622668 SLF1Q9BQI6 1058 aa10.3□□□□□ -0.76
HDAC9-229ENST00000622668 LRRC27Q9C0I9 530 aa10.3□□□□□ -0.76
HDAC9-229ENST00000622668 FBXO40Q9UH90 709 aa10.3□□□□□ -0.76
HDAC9-229ENST00000622668 SNX14Q9Y5W7 946 aa10.3□□□□□ -0.76
HDAC9-229ENST00000622668 ARHGEF28Q8N1W1 1705 aaKnown RBP10.3□□□□□ -0.76
HDAC9-229ENST00000622668 FCER1AP12319 257 aa10.3□□□□□ -0.76
HDAC9-229ENST00000622668 CCDC40Q4G0X9 1142 aa10.3□□□□□ -0.76
HDAC9-229ENST00000622668 USP50Q70EL3 339 aaPredicted RBP10.3□□□□□ -0.76
HDAC9-229ENST00000622668 KRT25Q7Z3Z0 450 aa10.3□□□□□ -0.76
HDAC9-229ENST00000622668 NUP62CLQ9H1M0 184 aa10.3□□□□□ -0.76
HDAC9-229ENST00000622668 RPAP3Q9H6T3 665 aaPredicted RBP10.3□□□□□ -0.76
HDAC9-229ENST00000622668 RGS12O14924 1447 aa10.3□□□□□ -0.76
HDAC9-229ENST00000622668 VWA3AA6NCI4 1184 aa10.29□□□□□ -0.76
HDAC9-229ENST00000622668 HOXA10P31260 410 aaPredicted RBP10.29□□□□□ -0.76
HDAC9-229ENST00000622668 IFT74Q96LB3 600 aa10.29□□□□□ -0.76
HDAC9-229ENST00000622668 BIN1O00499 593 aa10.29□□□□□ -0.76
HDAC9-229ENST00000622668 NOM1Q5C9Z4 860 aaKnown RBP10.29□□□□□ -0.76
HDAC9-229ENST00000622668 RRAGBQ5VZM2 374 aa10.29□□□□□ -0.76
HDAC9-229ENST00000622668 NBPF11Q86T75 865 aa10.29□□□□□ -0.76
HDAC9-229ENST00000622668 SIRT2Q8IXJ6 389 aa10.29□□□□□ -0.76
HDAC9-229ENST00000622668 ZBED2Q9BTP6 218 aa10.29□□□□□ -0.76
HDAC9-229ENST00000622668 KCNQ5Q9NR82 932 aa10.29□□□□□ -0.76
HDAC9-229ENST00000622668 RNF146Q9NTX7 359 aa10.29□□□□□ -0.76
HDAC9-229ENST00000622668 GPRC5DQ9NZD1 345 aa10.29□□□□□ -0.76
HDAC9-229ENST00000622668 SPDYE2BA6NHP3 402 aa10.29□□□□□ -0.76
HDAC9-229ENST00000622668 ZBBXA8MT70 800 aa10.29□□□□□ -0.76
HDAC9-229ENST00000622668 SPDYE6P0CI01 402 aa10.29□□□□□ -0.76
HDAC9-229ENST00000622668 ISM2Q6H9L7 571 aa10.29□□□□□ -0.76
HDAC9-229ENST00000622668 MIER3Q7Z3K6 550 aa10.29□□□□□ -0.76
HDAC9-229ENST00000622668 PLA2G4DQ86XP0 818 aa10.29□□□□□ -0.76
HDAC9-229ENST00000622668 IL27Q8NEV9 243 aa10.29□□□□□ -0.76
HDAC9-229ENST00000622668 USP26Q9BXU7 913 aa10.29□□□□□ -0.76
HDAC9-229ENST00000622668 TRIM5Q9C035 493 aa10.29□□□□□ -0.76
HDAC9-229ENST00000622668 DEF6Q9H4E7 631 aa10.29□□□□□ -0.76
HDAC9-229ENST00000622668 SLIT2O94813 1529 aa10.29□□□□□ -0.76
HDAC9-229ENST00000622668 RGL2O15211 777 aa10.28□□□□□ -0.76
HDAC9-229ENST00000622668 AKR1B1P15121 316 aa10.28□□□□□ -0.76
HDAC9-229ENST00000622668 DESP17661 470 aa10.28□□□□□ -0.76
HDAC9-229ENST00000622668 RNF207Q6ZRF8 634 aa10.28□□□□□ -0.76
HDAC9-229ENST00000622668 DPH6Q7L8W6 267 aa10.28□□□□□ -0.76
HDAC9-229ENST00000622668 LDHDQ86WU2 507 aa10.28□□□□□ -0.76
HDAC9-229ENST00000622668 ERO1BQ86YB8 467 aa10.28□□□□□ -0.76
HDAC9-229ENST00000622668 CCAR2Q8N163 923 aaKnown RBP10.28□□□□□ -0.76
HDAC9-229ENST00000622668 PRPF38AQ8NAV1 312 aaKnown RBP10.28□□□□□ -0.76
HDAC9-229ENST00000622668 DPF2Q92785 391 aa10.28□□□□□ -0.76
HDAC9-229ENST00000622668 EXOC1Q9NV70 894 aa10.28□□□□□ -0.76
HDAC9-229ENST00000622668 RGS17Q9UGC6 210 aaPredicted RBP10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms