RNA–Protein interactions for RNA: ENST00000620446.1

SNORD3C-202, Transcript of small nucleolar RNA, C/D box 3C, humanhuman

Gene SNORD3C, Length 218 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD3C-202ENST00000620446 ITGBL1O95965 494 aaPredicted RBP12.87□□□□□ -0.35
SNORD3C-202ENST00000620446 PDIA4P13667 645 aaKnown RBP12.87□□□□□ -0.35
SNORD3C-202ENST00000620446 INPP5BP32019 993 aa12.87□□□□□ -0.35
SNORD3C-202ENST00000620446 PPATQ06203 517 aa12.87□□□□□ -0.35
SNORD3C-202ENST00000620446 ASPRV1Q53RT3 343 aa12.87□□□□□ -0.35
SNORD3C-202ENST00000620446 GPATCH4Q5T3I0 446 aaKnown RBP12.87□□□□□ -0.35
SNORD3C-202ENST00000620446 NOL8Q76FK4 1167 aaKnown RBP12.87□□□□□ -0.35
SNORD3C-202ENST00000620446 GMCL1P1Q8NEA9 526 aa12.87□□□□□ -0.35
SNORD3C-202ENST00000620446 DCAF4Q8WV16 495 aa12.87□□□□□ -0.35
SNORD3C-202ENST00000620446 SLC10A4Q96EP9 437 aa12.87□□□□□ -0.35
SNORD3C-202ENST00000620446 TMEM47Q9BQJ4 181 aa12.87□□□□□ -0.35
SNORD3C-202ENST00000620446 RBM27Q9P2N5 1060 aaKnown RBP12.87□□□□□ -0.35
SNORD3C-202ENST00000620446 BAZ2BQ9UIF8 2168 aaKnown RBP12.87□□□□□ -0.35
SNORD3C-202ENST00000620446 NID2Q14112 1375 aa12.86□□□□□ -0.35
SNORD3C-202ENST00000620446 NMT2O60551 498 aa12.86□□□□□ -0.35
SNORD3C-202ENST00000620446 PFKFB2O60825 505 aa12.86□□□□□ -0.35
SNORD3C-202ENST00000620446 PARP1P09874 1014 aaKnown RBP12.86□□□□□ -0.35
SNORD3C-202ENST00000620446 PTPRAP18433 802 aa12.86□□□□□ -0.35
SNORD3C-202ENST00000620446 VGLL4Q14135 290 aa12.86□□□□□ -0.35
SNORD3C-202ENST00000620446 RTN1Q16799 776 aa12.86□□□□□ -0.35
SNORD3C-202ENST00000620446 MICU3Q86XE3 530 aa12.86□□□□□ -0.35
SNORD3C-202ENST00000620446 TRIM22Q8IYM9 498 aa12.86□□□□□ -0.35
SNORD3C-202ENST00000620446 FANCBQ8NB91 859 aa12.86□□□□□ -0.35
SNORD3C-202ENST00000620446 ZNF784Q8NCA9 323 aaPredicted RBP12.86□□□□□ -0.35
SNORD3C-202ENST00000620446 ZNF280CQ8ND82 737 aa12.86□□□□□ -0.35
SNORD3C-202ENST00000620446 NUP133Q8WUM0 1156 aa12.86□□□□□ -0.35
SNORD3C-202ENST00000620446 ZKSCAN4Q969J2 545 aaPredicted RBP12.86□□□□□ -0.35
SNORD3C-202ENST00000620446 TMX3Q96JJ7 454 aa12.86□□□□□ -0.35
SNORD3C-202ENST00000620446 LLPHQ9BRT6 129 aaKnown RBP12.86□□□□□ -0.35
SNORD3C-202ENST00000620446 TMOD4Q9NZQ9 345 aa12.86□□□□□ -0.35
SNORD3C-202ENST00000620446 TMX2Q9Y320 296 aa12.86□□□□□ -0.35
SNORD3C-202ENST00000620446 MYH15Q9Y2K3 1946 aa12.86□□□□□ -0.35
SNORD3C-202ENST00000620446 SPDYE5A6NIY4 337 aa12.85□□□□□ -0.35
SNORD3C-202ENST00000620446 TRAF5O00463 557 aa12.85□□□□□ -0.35
SNORD3C-202ENST00000620446 RAD21O60216 631 aa12.85□□□□□ -0.35
SNORD3C-202ENST00000620446 SMARCA1P28370 1054 aa12.85□□□□□ -0.35
SNORD3C-202ENST00000620446 PDIA3P30101 505 aaKnown RBP12.85□□□□□ -0.35
SNORD3C-202ENST00000620446 HMGN5P82970 282 aaKnown RBP12.85□□□□□ -0.35
SNORD3C-202ENST00000620446 AKAP17AQ02040 695 aaKnown RBP12.85□□□□□ -0.35
SNORD3C-202ENST00000620446 TRAF1Q13077 416 aa12.85□□□□□ -0.35
SNORD3C-202ENST00000620446 LDLRAD1Q5T700 205 aa12.85□□□□□ -0.35
SNORD3C-202ENST00000620446 USP17L2Q6R6M4 530 aa12.85□□□□□ -0.35
SNORD3C-202ENST00000620446 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.85□□□□□ -0.35
SNORD3C-202ENST00000620446 INTS4Q96HW7 963 aaKnown RBP12.85□□□□□ -0.35
SNORD3C-202ENST00000620446 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.85□□□□□ -0.35
SNORD3C-202ENST00000620446 KIAA1683Q9H0B3 1180 aa12.85□□□□□ -0.35
SNORD3C-202ENST00000620446 VCPKMTQ9H867 229 aa12.85□□□□□ -0.35
SNORD3C-202ENST00000620446 TPCN1Q9ULQ1 816 aa12.85□□□□□ -0.35
SNORD3C-202ENST00000620446 ZHX2Q9Y6X8 837 aa12.85□□□□□ -0.35
SNORD3C-202ENST00000620446 F5H6K3 240 aa12.84□□□□□ -0.35
SNORD3C-202ENST00000620446 CXCL11O14625 94 aa12.84□□□□□ -0.35
SNORD3C-202ENST00000620446 WDR46O15213 610 aaKnown RBP12.84□□□□□ -0.35
SNORD3C-202ENST00000620446 GUCY1A2P33402 732 aa12.84□□□□□ -0.35
SNORD3C-202ENST00000620446 SLC1A4P43007 532 aa12.84□□□□□ -0.35
SNORD3C-202ENST00000620446 KLRC3Q07444 240 aa12.84□□□□□ -0.35
SNORD3C-202ENST00000620446 TROAPQ12815 778 aa12.84□□□□□ -0.35
SNORD3C-202ENST00000620446 STK3Q13188 491 aa12.84□□□□□ -0.35
SNORD3C-202ENST00000620446 PABPC4Q13310 644 aaKnown RBP eCLIP12.84□□□□□ -0.35
SNORD3C-202ENST00000620446 PPIL2Q13356 520 aa12.84□□□□□ -0.35
SNORD3C-202ENST00000620446 GRM4Q14833 912 aa12.84□□□□□ -0.35
SNORD3C-202ENST00000620446 CCDC96Q2M329 555 aa12.84□□□□□ -0.35
SNORD3C-202ENST00000620446 SLFN13Q68D06 897 aa12.84□□□□□ -0.35
SNORD3C-202ENST00000620446 CHURC1Q8WUH1 139 aa12.84□□□□□ -0.35
SNORD3C-202ENST00000620446 WASF1Q92558 559 aa12.84□□□□□ -0.35
SNORD3C-202ENST00000620446 GTF3C6Q969F1 213 aa12.84□□□□□ -0.35
SNORD3C-202ENST00000620446 GMCL1Q96IK5 515 aa12.84□□□□□ -0.35
SNORD3C-202ENST00000620446 ISY1Q9ULR0 285 aaKnown RBP12.84□□□□□ -0.35
SNORD3C-202ENST00000620446 SNCAIPQ9Y6H5 919 aa12.84□□□□□ -0.35
SNORD3C-202ENST00000620446 PASKQ96RG2 1323 aa12.84□□□□□ -0.35
SNORD3C-202ENST00000620446 TMEM88BA6NKF7 163 aa12.83□□□□□ -0.36
SNORD3C-202ENST00000620446 UBE2Q2LH0YL09 131 aa12.83□□□□□ -0.36
SNORD3C-202ENST00000620446 ZBTB48P10074 688 aaPredicted RBP12.83□□□□□ -0.36
SNORD3C-202ENST00000620446 FDX1P10109 184 aa12.83□□□□□ -0.36
SNORD3C-202ENST00000620446 BMP3P12645 472 aa12.83□□□□□ -0.36
SNORD3C-202ENST00000620446 BACE1P56817 501 aa12.83□□□□□ -0.36
SNORD3C-202ENST00000620446 HUNKP57058 714 aa12.83□□□□□ -0.36
SNORD3C-202ENST00000620446 SPP2Q13103 211 aa12.83□□□□□ -0.36
SNORD3C-202ENST00000620446 RRP1BQ14684 758 aaKnown RBP12.83□□□□□ -0.36
SNORD3C-202ENST00000620446 ME3Q16798 604 aa12.83□□□□□ -0.36
SNORD3C-202ENST00000620446 FASTKD5Q7L8L6 764 aaKnown RBP12.83□□□□□ -0.36
SNORD3C-202ENST00000620446 FAM160B2Q86V87 743 aa12.83□□□□□ -0.36
SNORD3C-202ENST00000620446 LRRC47Q8N1G4 583 aaKnown RBP12.83□□□□□ -0.36
SNORD3C-202ENST00000620446 HHIPL1Q96JK4 782 aa12.83□□□□□ -0.36
SNORD3C-202ENST00000620446 IPO9Q96P70 1041 aaKnown RBP12.83□□□□□ -0.36
SNORD3C-202ENST00000620446 ELP3Q9H9T3 547 aa12.83□□□□□ -0.36
SNORD3C-202ENST00000620446 PNMA2Q9UL42 364 aa12.83□□□□□ -0.36
SNORD3C-202ENST00000620446 BRPF3Q9ULD4 1205 aa12.83□□□□□ -0.36
SNORD3C-202ENST00000620446 SLURP2P0DP57 97 aa12.82□□□□□ -0.36
SNORD3C-202ENST00000620446 PDHBP11177 359 aa12.82□□□□□ -0.36
SNORD3C-202ENST00000620446 XBP1P17861 261 aa12.82□□□□□ -0.36
SNORD3C-202ENST00000620446 PDCP20941 246 aa12.82□□□□□ -0.36
SNORD3C-202ENST00000620446 GTF2A2P52657 109 aa12.82□□□□□ -0.36
SNORD3C-202ENST00000620446 CCT2P78371 535 aaKnown RBP12.82□□□□□ -0.36
SNORD3C-202ENST00000620446 IKQ13123 557 aaPredicted RBP12.82□□□□□ -0.36
SNORD3C-202ENST00000620446 SNAPC2Q13487 334 aa12.82□□□□□ -0.36
SNORD3C-202ENST00000620446 CUL4AQ13619 759 aa12.82□□□□□ -0.36
SNORD3C-202ENST00000620446 FAM184AQ8NB25 1140 aa12.82□□□□□ -0.36
SNORD3C-202ENST00000620446 PROCA1Q8NCQ7 364 aaPredicted RBP12.82□□□□□ -0.36
SNORD3C-202ENST00000620446 CCDC102AQ96A19 550 aa12.82□□□□□ -0.36
SNORD3C-202ENST00000620446 OPTNQ96CV9 577 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms