RNA–Protein interactions for RNA: ENST00000606299.1

CSNK1A1-209, Transcript of casein kinase 1 alpha 1, human

TSL 3 BASIC

Gene CSNK1A1, Length 1,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSNK1A1-209	ENST00000606299	IL15	P40933	162 aa	Predicted RBP	11.92	□□□□□ -0.5
CSNK1A1-209	ENST00000606299	PCBP4	P57723	403 aa	Known RBP	11.92	□□□□□ -0.5
CSNK1A1-209	ENST00000606299	TYRO3	Q06418	890 aa		11.92	□□□□□ -0.5
CSNK1A1-209	ENST00000606299	USPL1	Q5W0Q7	1092 aa		11.92	□□□□□ -0.5
CSNK1A1-209	ENST00000606299	GPAT2	Q6NUI2	795 aa		11.92	□□□□□ -0.5
CSNK1A1-209	ENST00000606299	CHSY3	Q70JA7	882 aa		11.92	□□□□□ -0.5
CSNK1A1-209	ENST00000606299	ERICH6	Q7L0X2	663 aa		11.92	□□□□□ -0.5
CSNK1A1-209	ENST00000606299	ATG9A	Q7Z3C6	839 aa		11.92	□□□□□ -0.5
CSNK1A1-209	ENST00000606299	TTLL11	Q8NHH1	800 aa		11.92	□□□□□ -0.5
CSNK1A1-209	ENST00000606299	HSH2D	Q96JZ2	352 aa		11.92	□□□□□ -0.5
CSNK1A1-209	ENST00000606299	HINFP	Q9BQA5	517 aa		11.92	□□□□□ -0.5
CSNK1A1-209	ENST00000606299	PUS3	Q9BZE2	481 aa	Known RBP	11.92	□□□□□ -0.5
CSNK1A1-209	ENST00000606299	BRD7	Q9NPI1	651 aa		11.92	□□□□□ -0.5
CSNK1A1-209	ENST00000606299	NARF	Q9UHQ1	456 aa		11.92	□□□□□ -0.5
CSNK1A1-209	ENST00000606299	LAMA4	Q16363	1823 aa		11.92	□□□□□ -0.5
CSNK1A1-209	ENST00000606299	GNB5	O14775	395 aa		11.91	□□□□□ -0.5
CSNK1A1-209	ENST00000606299	SIN3B	O75182	1162 aa		11.91	□□□□□ -0.5
CSNK1A1-209	ENST00000606299	TBC1D9B	Q66K14	1250 aa		11.91	□□□□□ -0.5
CSNK1A1-209	ENST00000606299	CLEC4G	Q6UXB4	293 aa		11.91	□□□□□ -0.5
CSNK1A1-209	ENST00000606299	CEP63	Q96MT8	703 aa		11.91	□□□□□ -0.5
CSNK1A1-209	ENST00000606299	RIC1	Q4ADV7	1423 aa		11.91	□□□□□ -0.5
CSNK1A1-209	ENST00000606299	CHD4	Q14839	1912 aa		11.91	□□□□□ -0.5
CSNK1A1-209	ENST00000606299	COL4A1	P02462	1669 aa		11.91	□□□□□ -0.5
CSNK1A1-209	ENST00000606299	DOCK2	Q92608	1830 aa		11.9	□□□□□ -0.5
CSNK1A1-209	ENST00000606299	CHML	P26374	656 aa		11.9	□□□□□ -0.5
CSNK1A1-209	ENST00000606299	RFC4	P35249	363 aa		11.9	□□□□□ -0.5
CSNK1A1-209	ENST00000606299	RTN1	Q16799	776 aa		11.9	□□□□□ -0.5
CSNK1A1-209	ENST00000606299	QSER1	Q2KHR3	1735 aa		11.9	□□□□□ -0.5
CSNK1A1-209	ENST00000606299	LINC00114	Q6XXX2	140 aa		11.9	□□□□□ -0.5
CSNK1A1-209	ENST00000606299	AMIGO3	Q86WK7	504 aa		11.9	□□□□□ -0.5
CSNK1A1-209	ENST00000606299	NEUROD6	Q96NK8	337 aa		11.9	□□□□□ -0.5
CSNK1A1-209	ENST00000606299	DBNDD2	Q9BQY9	259 aa		11.9	□□□□□ -0.5
CSNK1A1-209	ENST00000606299	DBNL	Q9UJU6	430 aa	Known RBP	11.9	□□□□□ -0.5
CSNK1A1-209	ENST00000606299	CCDC88A	Q3V6T2	1871 aa		11.89	□□□□□ -0.51
CSNK1A1-209	ENST00000606299	ANKRD31	Q8N7Z5	1873 aa		11.89	□□□□□ -0.51
CSNK1A1-209	ENST00000606299	HSP90B1	P14625	803 aa	Known RBP	11.89	□□□□□ -0.51
CSNK1A1-209	ENST00000606299	SFSWAP	Q12872	951 aa	Known RBP	11.89	□□□□□ -0.51
CSNK1A1-209	ENST00000606299	TRAPPC3L	Q5T215	181 aa		11.89	□□□□□ -0.51
CSNK1A1-209	ENST00000606299	IER5	Q5VY09	327 aa		11.89	□□□□□ -0.51
CSNK1A1-209	ENST00000606299	SYT9	Q86SS6	491 aa		11.89	□□□□□ -0.51
CSNK1A1-209	ENST00000606299	BOLA2	Q9H3K6	86 aa		11.89	□□□□□ -0.51
CSNK1A1-209	ENST00000606299	CNNM1	Q9NRU3	951 aa		11.89	□□□□□ -0.51
CSNK1A1-209	ENST00000606299	ELOA3C	A0A087WX78	387 aa	Predicted RBP	11.88	□□□□□ -0.51
CSNK1A1-209	ENST00000606299	ELOA3D	A6NLF2	546 aa	Predicted RBP	11.88	□□□□□ -0.51
CSNK1A1-209	ENST00000606299	REC8	O95072	547 aa		11.88	□□□□□ -0.51
CSNK1A1-209	ENST00000606299	RBM25	P49756	843 aa	Known RBP	11.88	□□□□□ -0.51
CSNK1A1-209	ENST00000606299	SPEM2	Q0P670	501 aa		11.88	□□□□□ -0.51
CSNK1A1-209	ENST00000606299	PLA2G4E	Q3MJ16	856 aa		11.88	□□□□□ -0.51
CSNK1A1-209	ENST00000606299	ELOA3B	Q3SY89	546 aa		11.88	□□□□□ -0.51
CSNK1A1-209	ENST00000606299	CCDC152	Q4G0S7	254 aa		11.88	□□□□□ -0.51
CSNK1A1-209	ENST00000606299	METTL24	Q5JXM2	366 aa		11.88	□□□□□ -0.51
CSNK1A1-209	ENST00000606299	ZNF280C	Q8ND82	737 aa		11.88	□□□□□ -0.51
CSNK1A1-209	ENST00000606299	ELOA3	Q8NG57	546 aa		11.88	□□□□□ -0.51
CSNK1A1-209	ENST00000606299	FBXO41	Q8TF61	875 aa		11.88	□□□□□ -0.51
CSNK1A1-209	ENST00000606299	EVI5L	Q96CN4	794 aa		11.88	□□□□□ -0.51
CSNK1A1-209	ENST00000606299	SETDB2	Q96T68	719 aa		11.88	□□□□□ -0.51
CSNK1A1-209	ENST00000606299	MDFI	Q99750	246 aa		11.88	□□□□□ -0.51
CSNK1A1-209	ENST00000606299	NYX	Q9GZU5	481 aa		11.88	□□□□□ -0.51
CSNK1A1-209	ENST00000606299	GPR108	Q9NPR9	543 aa		11.88	□□□□□ -0.51
CSNK1A1-209	ENST00000606299	NOP53	Q9NZM5	478 aa	Known RBP	11.88	□□□□□ -0.51
CSNK1A1-209	ENST00000606299		A0A1B0GUL7	405 aa		11.87	□□□□□ -0.51
CSNK1A1-209	ENST00000606299	TIMM10	P62072	90 aa		11.87	□□□□□ -0.51
CSNK1A1-209	ENST00000606299	BECN1	Q14457	450 aa		11.87	□□□□□ -0.51
CSNK1A1-209	ENST00000606299	TXNRD1	Q16881	649 aa		11.87	□□□□□ -0.51
CSNK1A1-209	ENST00000606299	LDHAL6A	Q6ZMR3	332 aa		11.87	□□□□□ -0.51
CSNK1A1-209	ENST00000606299	NBPF5P	Q86XG9	351 aa	Predicted RBP	11.87	□□□□□ -0.51
CSNK1A1-209	ENST00000606299	DIAPH3	Q9NSV4	1193 aa		11.87	□□□□□ -0.51
CSNK1A1-209	ENST00000606299	KCNH4	Q9UQ05	1017 aa		11.87	□□□□□ -0.51
CSNK1A1-209	ENST00000606299	AKAP2	Q9Y2D5	859 aa		11.87	□□□□□ -0.51
CSNK1A1-209	ENST00000606299	ABCC12	Q96J65	1359 aa		11.87	□□□□□ -0.51
CSNK1A1-209	ENST00000606299	ADARB2-AS1	A8MUL3	147 aa		11.86	□□□□□ -0.51
CSNK1A1-209	ENST00000606299	NPHP1	O15259	732 aa		11.86	□□□□□ -0.51
CSNK1A1-209	ENST00000606299	APBA3	O96018	575 aa		11.86	□□□□□ -0.51
CSNK1A1-209	ENST00000606299	ATP5J	P18859	108 aa		11.86	□□□□□ -0.51
CSNK1A1-209	ENST00000606299	BTLA	Q7Z6A9	289 aa		11.86	□□□□□ -0.51
CSNK1A1-209	ENST00000606299	DNAJC2	Q99543	621 aa	Known RBP	11.86	□□□□□ -0.51
CSNK1A1-209	ENST00000606299	SLC30A3	Q99726	388 aa		11.86	□□□□□ -0.51
CSNK1A1-209	ENST00000606299	FSD1	Q9BTV5	496 aa		11.86	□□□□□ -0.51
CSNK1A1-209	ENST00000606299	USP26	Q9BXU7	913 aa		11.86	□□□□□ -0.51
CSNK1A1-209	ENST00000606299	RGS17	Q9UGC6	210 aa	Predicted RBP	11.86	□□□□□ -0.51
CSNK1A1-209	ENST00000606299	RTL9	Q8NET4	1388 aa		11.86	□□□□□ -0.51
CSNK1A1-209	ENST00000606299	ALAS2	P22557	587 aa		11.85	□□□□□ -0.51
CSNK1A1-209	ENST00000606299	WEE1	P30291	646 aa		11.85	□□□□□ -0.51
CSNK1A1-209	ENST00000606299	ADORA1	P30542	326 aa		11.85	□□□□□ -0.51
CSNK1A1-209	ENST00000606299	ATP2B3	Q16720	1220 aa		11.85	□□□□□ -0.51
CSNK1A1-209	ENST00000606299	GORAB	Q5T7V8	394 aa		11.85	□□□□□ -0.51
CSNK1A1-209	ENST00000606299	CWC27	Q6UX04	472 aa	Known RBP	11.85	□□□□□ -0.51
CSNK1A1-209	ENST00000606299	FAM200A	Q8TCP9	573 aa		11.85	□□□□□ -0.51
CSNK1A1-209	ENST00000606299	TNFRSF25	Q93038	417 aa		11.85	□□□□□ -0.51
CSNK1A1-209	ENST00000606299	MPHOSPH8	Q99549	860 aa		11.85	□□□□□ -0.51
CSNK1A1-209	ENST00000606299	ANO2	Q9NQ90	1003 aa		11.85	□□□□□ -0.51
CSNK1A1-209	ENST00000606299	SEC31B	Q9NQW1	1179 aa		11.85	□□□□□ -0.51
CSNK1A1-209	ENST00000606299	RIPOR2	Q9Y4F9	1068 aa		11.85	□□□□□ -0.51
CSNK1A1-209	ENST00000606299	CARMIL3	Q8ND23	1372 aa		11.84	□□□□□ -0.51
CSNK1A1-209	ENST00000606299	NRXN2	Q9P2S2	1712 aa		11.84	□□□□□ -0.51
CSNK1A1-209	ENST00000606299	TGFBR3L	H3BV60	316 aa		11.84	□□□□□ -0.51
CSNK1A1-209	ENST00000606299	COL8A1	P27658	744 aa		11.84	□□□□□ -0.51
CSNK1A1-209	ENST00000606299	SSFA2	P28290	1259 aa		11.84	□□□□□ -0.51
CSNK1A1-209	ENST00000606299	IGHMBP2	P38935	993 aa	Known RBP	11.84	□□□□□ -0.51
CSNK1A1-209	ENST00000606299	GRIN2C	Q14957	1233 aa		11.84	□□□□□ -0.51

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