RNA–Protein interactions for RNA: ENST00000601592.5

USE1-209, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 3

Gene USE1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-209ENST00000601592 PKN2Q16513 984 aaKnown RBP15.18■□□□□ 0.02
USE1-209ENST00000601592 SIAH1Q8IUQ4 282 aa15.18■□□□□ 0.02
USE1-209ENST00000601592 CEP95Q96GE4 821 aa15.18■□□□□ 0.02
USE1-209ENST00000601592 P2RX7Q99572 595 aaKnown RBP15.18■□□□□ 0.02
USE1-209ENST00000601592 PAGR1Q9BTK6 254 aa15.18■□□□□ 0.02
USE1-209ENST00000601592 DSCC1Q9BVC3 393 aa15.18■□□□□ 0.02
USE1-209ENST00000601592 VCPKMTQ9H867 229 aa15.18■□□□□ 0.02
USE1-209ENST00000601592 GOPCQ9HD26 462 aa15.18■□□□□ 0.02
USE1-209ENST00000601592 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.18■□□□□ 0.02
USE1-209ENST00000601592 TMX2Q9Y320 296 aa15.18■□□□□ 0.02
USE1-209ENST00000601592 PLIN4Q96Q06 1357 aa15.17■□□□□ 0.02
USE1-209ENST00000601592 ZNF213O14771 459 aa15.17■□□□□ 0.02
USE1-209ENST00000601592 FCGRTP55899 365 aa15.17■□□□□ 0.02
USE1-209ENST00000601592 FAM110CQ1W6H9 321 aa15.17■□□□□ 0.02
USE1-209ENST00000601592 KIAA1755Q5JYT7 1200 aa15.17■□□□□ 0.02
USE1-209ENST00000601592 FBXO46Q6PJ61 603 aaPredicted RBP15.17■□□□□ 0.02
USE1-209ENST00000601592 NEDD1Q8NHV4 660 aa15.17■□□□□ 0.02
USE1-209ENST00000601592 LPAR1Q92633 364 aa15.17■□□□□ 0.02
USE1-209ENST00000601592 CLIP2Q9UDT6 1046 aa15.17■□□□□ 0.02
USE1-209ENST00000601592 RLFQ13129 1914 aa15.17■□□□□ 0.02
USE1-209ENST00000601592 PEX10O60683 326 aa15.16■□□□□ 0.02
USE1-209ENST00000601592 IMMTQ16891 758 aaKnown RBP15.16■□□□□ 0.02
USE1-209ENST00000601592 BMP2KLQ5H9B9 411 aa15.16■□□□□ 0.02
USE1-209ENST00000601592 AKNAD1Q5T1N1 836 aa15.16■□□□□ 0.02
USE1-209ENST00000601592 ERICH6BQ5W0A0 696 aa15.16■□□□□ 0.02
USE1-209ENST00000601592 CATSPERGQ6ZRH7 1159 aa15.16■□□□□ 0.02
USE1-209ENST00000601592 MFSD6Q6ZSS7 791 aa15.16■□□□□ 0.02
USE1-209ENST00000601592 TBC1D10CQ8IV04 446 aa15.16■□□□□ 0.02
USE1-209ENST00000601592 LRRC47Q8N1G4 583 aaKnown RBP15.16■□□□□ 0.02
USE1-209ENST00000601592 TRIM47Q96LD4 638 aa15.16■□□□□ 0.02
USE1-209ENST00000601592 MTMR4Q9NYA4 1195 aa15.16■□□□□ 0.02
USE1-209ENST00000601592 NYAP2Q9P242 653 aa15.16■□□□□ 0.02
USE1-209ENST00000601592 CTNNA3Q9UI47 895 aa15.16■□□□□ 0.02
USE1-209ENST00000601592 ISY1Q9ULR0 285 aaKnown RBP15.16■□□□□ 0.02
USE1-209ENST00000601592 TACC3Q9Y6A5 838 aa15.16■□□□□ 0.02
USE1-209ENST00000601592 IGKV6D-41A0A0C4DH26 115 aa15.15■□□□□ 0.02
USE1-209ENST00000601592 CCDC85CA6NKD9 419 aa15.15■□□□□ 0.02
USE1-209ENST00000601592 WDR46O15213 610 aaKnown RBP15.15■□□□□ 0.02
USE1-209ENST00000601592 SGSM2O43147 1006 aa15.15■□□□□ 0.02
USE1-209ENST00000601592 ORC4O43929 436 aa15.15■□□□□ 0.02
USE1-209ENST00000601592 TTLL1O95922 423 aa15.15■□□□□ 0.02
USE1-209ENST00000601592 CTGFP29279 349 aa15.15■□□□□ 0.02
USE1-209ENST00000601592 CCAR1Q8IX12 1150 aaKnown RBP15.15■□□□□ 0.02
USE1-209ENST00000601592 GTF3C2Q8WUA4 911 aaPredicted RBP15.15■□□□□ 0.02
USE1-209ENST00000601592 NBPF3Q9H094 633 aa15.15■□□□□ 0.02
USE1-209ENST00000601592 RNF41Q9H4P4 317 aaPredicted RBP15.15■□□□□ 0.02
USE1-209ENST00000601592 STX8Q9UNK0 236 aa15.15■□□□□ 0.02
USE1-209ENST00000601592 HPS5Q9UPZ3 1129 aa15.15■□□□□ 0.02
USE1-209ENST00000601592 A0A0G2JMZ2 1700 aa15.14■□□□□ 0.01
USE1-209ENST00000601592 TNPO2O14787 897 aaKnown RBP15.14■□□□□ 0.01
USE1-209ENST00000601592 NMT2O60551 498 aa15.14■□□□□ 0.01
USE1-209ENST00000601592 FLOT1O75955 427 aa15.14■□□□□ 0.01
USE1-209ENST00000601592 HOXD10P28358 340 aa15.14■□□□□ 0.01
USE1-209ENST00000601592 PTH1RQ03431 593 aa15.14■□□□□ 0.01
USE1-209ENST00000601592 FAM83BQ5T0W9 1011 aa15.14■□□□□ 0.01
USE1-209ENST00000601592 KIAA1211Q6ZU35 1233 aa15.14■□□□□ 0.01
USE1-209ENST00000601592 STAG1Q8WVM7 1258 aa15.14■□□□□ 0.01
USE1-209ENST00000601592 CHMP4CQ96CF2 233 aa15.14■□□□□ 0.01
USE1-209ENST00000601592 NUP88Q99567 741 aaPredicted RBP15.14■□□□□ 0.01
USE1-209ENST00000601592 CWC22Q9HCG8 908 aaKnown RBP15.14■□□□□ 0.01
USE1-209ENST00000601592 TXNRD2Q9NNW7 524 aa15.14■□□□□ 0.01
USE1-209ENST00000601592 MTMR7Q9Y216 660 aa15.14■□□□□ 0.01
USE1-209ENST00000601592 PTPN22Q9Y2R2 807 aa15.14■□□□□ 0.01
USE1-209ENST00000601592 NEDD4P46934 1319 aa15.14■□□□□ 0.01
USE1-209ENST00000601592 MYPNQ86TC9 1320 aa15.14■□□□□ 0.01
USE1-209ENST00000601592 PLXNB2O15031 1838 aa15.13■□□□□ 0.01
USE1-209ENST00000601592 SPDYE16A6NNV3 312 aaPredicted RBP15.13■□□□□ 0.01
USE1-209ENST00000601592 F5H6K3 240 aa15.13■□□□□ 0.01
USE1-209ENST00000601592 NDUFB10O96000 172 aa15.13■□□□□ 0.01
USE1-209ENST00000601592 GNRH1P01148 92 aa15.13■□□□□ 0.01
USE1-209ENST00000601592 PCP11498 1178 aaKnown RBP15.13■□□□□ 0.01
USE1-209ENST00000601592 ERVK-9P63128 1117 aa15.13■□□□□ 0.01
USE1-209ENST00000601592 ERVK-24P63145 666 aa15.13■□□□□ 0.01
USE1-209ENST00000601592 KLRC3Q07444 240 aa15.13■□□□□ 0.01
USE1-209ENST00000601592 COG2Q14746 738 aa15.13■□□□□ 0.01
USE1-209ENST00000601592 PPP4R3BQ5MIZ7 849 aa15.13■□□□□ 0.01
USE1-209ENST00000601592 CASC1Q6TDU7 716 aa15.13■□□□□ 0.01
USE1-209ENST00000601592 GPRC5AQ8NFJ5 357 aa15.13■□□□□ 0.01
USE1-209ENST00000601592 COA7Q96BR5 231 aa15.13■□□□□ 0.01
USE1-209ENST00000601592 MORF4L1Q9UBU8 362 aa15.13■□□□□ 0.01
USE1-209ENST00000601592 PTCH2Q9Y6C5 1203 aa15.13■□□□□ 0.01
USE1-209ENST00000601592 B4E1Z4 1266 aa15.12■□□□□ 0.01
USE1-209ENST00000601592 FGRP09769 529 aa15.12■□□□□ 0.01
USE1-209ENST00000601592 IFFO2Q5TF58 517 aa15.12■□□□□ 0.01
USE1-209ENST00000601592 WDR78Q5VTH9 848 aa15.12■□□□□ 0.01
USE1-209ENST00000601592 RAET1EQ8TD07 263 aa15.12■□□□□ 0.01
USE1-209ENST00000601592 ESR2Q92731 530 aa15.12■□□□□ 0.01
USE1-209ENST00000601592 ESYT1Q9BSJ8 1104 aa15.12■□□□□ 0.01
USE1-209ENST00000601592 IL17RBQ9NRM6 502 aa15.12■□□□□ 0.01
USE1-209ENST00000601592 FBXO28Q9NVF7 368 aa15.12■□□□□ 0.01
USE1-209ENST00000601592 RBPJLQ9UBG7 517 aa15.12■□□□□ 0.01
USE1-209ENST00000601592 SRRDQ9UH36 339 aa15.12■□□□□ 0.01
USE1-209ENST00000601592 RABGAP1Q9Y3P9 1069 aa15.12■□□□□ 0.01
USE1-209ENST00000601592 U3KPZ7 1027 aaPredicted RBP15.12■□□□□ 0.01
USE1-209ENST00000601592 CDC45O75419 566 aa15.11■□□□□ 0.01
USE1-209ENST00000601592 PRMT2P55345 433 aa15.11■□□□□ 0.01
USE1-209ENST00000601592 PRKCZQ05513 592 aa15.11■□□□□ 0.01
USE1-209ENST00000601592 PLS1Q14651 629 aa15.11■□□□□ 0.01
USE1-209ENST00000601592 SLC9C1Q4G0N8 1177 aa15.11■□□□□ 0.01
USE1-209ENST00000601592 SLFN13Q68D06 897 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms