RNA–Protein interactions for RNA: ENST00000589797.5

RETREG3-208, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 4,149 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-208ENST00000589797 ZFP91Q96JP5 570 aaPredicted RBP16.44■□□□□ 0.22
RETREG3-208ENST00000589797 PAXBP1Q9Y5B6 917 aa16.44■□□□□ 0.22
RETREG3-208ENST00000589797 MRPL12P52815 198 aaKnown RBP16.44■□□□□ 0.22
RETREG3-208ENST00000589797 TBC1D8BQ0IIM8 1120 aa16.44■□□□□ 0.22
RETREG3-208ENST00000589797 ST3GAL1Q11201 340 aa16.44■□□□□ 0.22
RETREG3-208ENST00000589797 C3orf67Q6ZVT6 689 aa16.44■□□□□ 0.22
RETREG3-208ENST00000589797 SNX29Q8TEQ0 813 aa16.44■□□□□ 0.22
RETREG3-208ENST00000589797 ATP2B4P23634 1241 aa16.43■□□□□ 0.22
RETREG3-208ENST00000589797 SNAP25P60880 206 aa16.43■□□□□ 0.22
RETREG3-208ENST00000589797 TXNRD3Q86VQ6 643 aa16.43■□□□□ 0.22
RETREG3-208ENST00000589797 SYCP3Q8IZU3 236 aa16.43■□□□□ 0.22
RETREG3-208ENST00000589797 CSGALNACT2Q8N6G5 542 aa16.43■□□□□ 0.22
RETREG3-208ENST00000589797 MLKLQ8NB16 471 aa16.43■□□□□ 0.22
RETREG3-208ENST00000589797 CAPZA3Q96KX2 299 aa16.43■□□□□ 0.22
RETREG3-208ENST00000589797 DDX39AO00148 427 aaKnown RBP16.43■□□□□ 0.22
RETREG3-208ENST00000589797 TRAF5O00463 557 aa16.43■□□□□ 0.22
RETREG3-208ENST00000589797 CLEC10AQ8IUN9 316 aa16.43■□□□□ 0.22
RETREG3-208ENST00000589797 SYNRGQ9UMZ2 1314 aa16.43■□□□□ 0.22
RETREG3-208ENST00000589797 NOP2P46087 812 aaKnown RBP16.43■□□□□ 0.22
RETREG3-208ENST00000589797 TAF3Q5VWG9 929 aa16.43■□□□□ 0.22
RETREG3-208ENST00000589797 WDHD1O75717 1129 aaPredicted RBP16.43■□□□□ 0.22
RETREG3-208ENST00000589797 GDF11O95390 407 aa16.43■□□□□ 0.22
RETREG3-208ENST00000589797 GRAPQ13588 217 aa16.43■□□□□ 0.22
RETREG3-208ENST00000589797 TMEM87AQ8NBN3 555 aa16.43■□□□□ 0.22
RETREG3-208ENST00000589797 GRAPLQ8TC17 118 aaPredicted RBP16.43■□□□□ 0.22
RETREG3-208ENST00000589797 IFT172Q9UG01 1749 aa16.42■□□□□ 0.22
RETREG3-208ENST00000589797 SLIT1O75093 1534 aa16.42■□□□□ 0.22
RETREG3-208ENST00000589797 NTSR2O95665 410 aa16.42■□□□□ 0.22
RETREG3-208ENST00000589797 CTR9Q6PD62 1173 aa16.42■□□□□ 0.22
RETREG3-208ENST00000589797 LRRC8AQ8IWT6 810 aa16.42■□□□□ 0.22
RETREG3-208ENST00000589797 SAMSN1Q9NSI8 373 aaKnown RBP16.42■□□□□ 0.22
RETREG3-208ENST00000589797 A0A1W2PQ27 194 aa16.42■□□□□ 0.22
RETREG3-208ENST00000589797 A0A1W2PQ64 194 aa16.42■□□□□ 0.22
RETREG3-208ENST00000589797 A0A1W2PQD8 194 aa16.42■□□□□ 0.22
RETREG3-208ENST00000589797 CCDC174Q6PII3 467 aa16.42■□□□□ 0.22
RETREG3-208ENST00000589797 JDP2Q8WYK2 163 aa16.42■□□□□ 0.22
RETREG3-208ENST00000589797 MXD3Q9BW11 206 aa16.42■□□□□ 0.22
RETREG3-208ENST00000589797 SRRTQ9BXP5 876 aaKnown RBP16.42■□□□□ 0.22
RETREG3-208ENST00000589797 RNF26Q9BY78 433 aaPredicted RBP16.42■□□□□ 0.22
RETREG3-208ENST00000589797 HDAC9Q9UKV0 1011 aa16.42■□□□□ 0.22
RETREG3-208ENST00000589797 LEMD3Q9Y2U8 911 aa16.42■□□□□ 0.22
RETREG3-208ENST00000589797 RAD17O75943 681 aa16.42■□□□□ 0.22
RETREG3-208ENST00000589797 KRT9P35527 623 aa16.42■□□□□ 0.22
RETREG3-208ENST00000589797 CABP7Q86V35 215 aa16.42■□□□□ 0.22
RETREG3-208ENST00000589797 TBC1D22AQ8WUA7 517 aa16.42■□□□□ 0.22
RETREG3-208ENST00000589797 CTAGE1Q96RT6 745 aa16.42■□□□□ 0.22
RETREG3-208ENST00000589797 PIGSQ96S52 555 aa16.42■□□□□ 0.22
RETREG3-208ENST00000589797 USP49Q70CQ1 688 aa16.41■□□□□ 0.22
RETREG3-208ENST00000589797 SV2BQ7L1I2 683 aa16.41■□□□□ 0.22
RETREG3-208ENST00000589797 LUC7L2Q9Y383 392 aaKnown RBP16.41■□□□□ 0.22
RETREG3-208ENST00000589797 FER1L4A9Z1Z3 1794 aa16.41■□□□□ 0.22
RETREG3-208ENST00000589797 AKR1B15C9JRZ8 316 aaPredicted RBP16.41■□□□□ 0.22
RETREG3-208ENST00000589797 CCDC175P0C221 793 aa16.41■□□□□ 0.22
RETREG3-208ENST00000589797 PPP2R5BQ15173 497 aa16.41■□□□□ 0.22
RETREG3-208ENST00000589797 NELFBQ8WX92 580 aa16.41■□□□□ 0.22
RETREG3-208ENST00000589797 PSMB7Q99436 277 aa16.41■□□□□ 0.22
RETREG3-208ENST00000589797 POLD4Q9HCU8 107 aa16.41■□□□□ 0.22
RETREG3-208ENST00000589797 CD209Q9NNX6 404 aa16.41■□□□□ 0.22
RETREG3-208ENST00000589797 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.41■□□□□ 0.222e-6■■■■■ 88.7
RETREG3-208ENST00000589797 TBCAO75347 108 aaKnown RBP16.41■□□□□ 0.22
RETREG3-208ENST00000589797 SPAG5Q96R06 1193 aa16.41■□□□□ 0.22
RETREG3-208ENST00000589797 PYM1Q9BRP8 204 aaKnown RBP16.41■□□□□ 0.22
RETREG3-208ENST00000589797 PLA2G12BQ9BX93 195 aa16.41■□□□□ 0.22
RETREG3-208ENST00000589797 PPEF1O14829 653 aaPredicted RBP16.4■□□□□ 0.22
RETREG3-208ENST00000589797 SLU7O95391 586 aaKnown RBP16.4■□□□□ 0.22
RETREG3-208ENST00000589797 ADCY7P51828 1080 aa16.4■□□□□ 0.22
RETREG3-208ENST00000589797 UBXN2AP68543 259 aa16.4■□□□□ 0.22
RETREG3-208ENST00000589797 PAK1Q13153 545 aa16.4■□□□□ 0.22
RETREG3-208ENST00000589797 MCM6Q14566 821 aa16.4■□□□□ 0.22
RETREG3-208ENST00000589797 CALCRLQ16602 461 aa16.4■□□□□ 0.22
RETREG3-208ENST00000589797 TDRD7Q8NHU6 1098 aaKnown RBP16.4■□□□□ 0.22
RETREG3-208ENST00000589797 IGDCC4Q8TDY8 1250 aa16.4■□□□□ 0.22
RETREG3-208ENST00000589797 FERMT2Q96AC1 680 aa16.4■□□□□ 0.22
RETREG3-208ENST00000589797 HINFPQ9BQA5 517 aa16.4■□□□□ 0.22
RETREG3-208ENST00000589797 OVOS2A0A0G2JMS6 1433 aa16.4■□□□□ 0.22
RETREG3-208ENST00000589797 ODF2Q5BJF6 829 aa16.4■□□□□ 0.22
RETREG3-208ENST00000589797 STAG2Q8N3U4 1231 aa16.4■□□□□ 0.22
RETREG3-208ENST00000589797 GJD4Q96KN9 370 aaPredicted RBP16.4■□□□□ 0.22
RETREG3-208ENST00000589797 ZNF500O60304 480 aaPredicted RBP16.4■□□□□ 0.22
RETREG3-208ENST00000589797 SPAG1Q07617 926 aa16.4■□□□□ 0.22
RETREG3-208ENST00000589797 HERC4Q5GLZ8 1057 aaPredicted RBP16.4■□□□□ 0.22
RETREG3-208ENST00000589797 NCAPH2Q6IBW4 605 aa16.4■□□□□ 0.22
RETREG3-208ENST00000589797 PXDNLA1KZ92 1463 aa16.4■□□□□ 0.22
RETREG3-208ENST00000589797 MACROD2A1Z1Q3 448 aa16.39■□□□□ 0.21
RETREG3-208ENST00000589797 RHOXF2BP0C7M4 288 aa16.39■□□□□ 0.21
RETREG3-208ENST00000589797 ALDH1B1P30837 517 aa16.39■□□□□ 0.21
RETREG3-208ENST00000589797 NLGN1Q8N2Q7 840 aa16.39■□□□□ 0.21
RETREG3-208ENST00000589797 STAG1Q8WVM7 1258 aa16.39■□□□□ 0.21
RETREG3-208ENST00000589797 KIFC2Q96AC6 838 aa16.39■□□□□ 0.21
RETREG3-208ENST00000589797 SLF1Q9BQI6 1058 aa16.39■□□□□ 0.21
RETREG3-208ENST00000589797 RHOXF2Q9BQY4 288 aa16.39■□□□□ 0.21
RETREG3-208ENST00000589797 NOC4LQ9BVI4 516 aaKnown RBP16.39■□□□□ 0.21
RETREG3-208ENST00000589797 FOXP1Q9H334 677 aaPredicted RBP16.39■□□□□ 0.21
RETREG3-208ENST00000589797 SLC39A2Q9NP94 309 aa16.39■□□□□ 0.21
RETREG3-208ENST00000589797 STK32BQ9NY57 414 aa16.39■□□□□ 0.21
RETREG3-208ENST00000589797 CACNB1Q02641 598 aaPredicted RBP16.39■□□□□ 0.21
RETREG3-208ENST00000589797 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.39■□□□□ 0.21
RETREG3-208ENST00000589797 SCAF8Q9UPN6 1271 aaKnown RBP16.39■□□□□ 0.21
RETREG3-208ENST00000589797 TMCO5BA8MYB1 307 aa16.39■□□□□ 0.21
RETREG3-208ENST00000589797 CDK8P49336 464 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms