RNA–Protein interactions for RNA: ENST00000588961.1

KDM4B-207, Transcript of lysine demethylase 4B, humanhuman

TSL 4

Gene KDM4B, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4B-207ENST00000588961 CAVIN2O95810 425 aa10.15□□□□□ -0.78
KDM4B-207ENST00000588961 FGAP02671 866 aa10.15□□□□□ -0.78
KDM4B-207ENST00000588961 TIE1P35590 1138 aa10.15□□□□□ -0.78
KDM4B-207ENST00000588961 FGD1P98174 961 aa10.15□□□□□ -0.78
KDM4B-207ENST00000588961 NOGQ13253 232 aa10.15□□□□□ -0.78
KDM4B-207ENST00000588961 SHROOM1Q2M3G4 852 aaPredicted RBP10.15□□□□□ -0.78
KDM4B-207ENST00000588961 Q6ZUG5 572 aa10.15□□□□□ -0.78
KDM4B-207ENST00000588961 CCDC84Q86UT8 332 aaPredicted RBP10.15□□□□□ -0.78
KDM4B-207ENST00000588961 METTL16Q86W50 562 aaKnown RBP10.15□□□□□ -0.78
KDM4B-207ENST00000588961 IFNL3Q8IZI9 196 aa10.15□□□□□ -0.78
KDM4B-207ENST00000588961 TMTC2Q8N394 836 aa10.15□□□□□ -0.78
KDM4B-207ENST00000588961 JMYQ8N9B5 988 aa10.15□□□□□ -0.78
KDM4B-207ENST00000588961 DYNLL2Q96FJ2 89 aa10.15□□□□□ -0.78
KDM4B-207ENST00000588961 OTUD5Q96G74 571 aa10.15□□□□□ -0.78
KDM4B-207ENST00000588961 TMEM87BQ96K49 555 aa10.15□□□□□ -0.78
KDM4B-207ENST00000588961 GZF1Q9H116 711 aaPredicted RBP10.15□□□□□ -0.78
KDM4B-207ENST00000588961 CNNM2Q9H8M5 875 aa10.15□□□□□ -0.78
KDM4B-207ENST00000588961 EPB41L4AQ9HCS5 686 aaPredicted RBP10.15□□□□□ -0.78
KDM4B-207ENST00000588961 HERC5Q9UII4 1024 aaKnown RBP10.15□□□□□ -0.78
KDM4B-207ENST00000588961 NAV1Q8NEY1 1877 aa10.15□□□□□ -0.79
KDM4B-207ENST00000588961 MINDY4BA8MYZ0 360 aa10.14□□□□□ -0.79
KDM4B-207ENST00000588961 CTNND1O60716 968 aaKnown RBP10.14□□□□□ -0.79
KDM4B-207ENST00000588961 GDF11O95390 407 aa10.14□□□□□ -0.79
KDM4B-207ENST00000588961 MAP2K2P36507 400 aa10.14□□□□□ -0.79
KDM4B-207ENST00000588961 TDO2P48775 406 aa10.14□□□□□ -0.79
KDM4B-207ENST00000588961 JAG1P78504 1218 aa10.14□□□□□ -0.79
KDM4B-207ENST00000588961 CCDC183Q5T5S1 534 aa10.14□□□□□ -0.79
KDM4B-207ENST00000588961 C12orf60Q5U649 245 aa10.14□□□□□ -0.79
KDM4B-207ENST00000588961 CAVIN1Q6NZI2 390 aaKnown RBP10.14□□□□□ -0.79
KDM4B-207ENST00000588961 GIMAP6Q6P9H5 292 aa10.14□□□□□ -0.79
KDM4B-207ENST00000588961 SCYL3Q8IZE3 742 aa10.14□□□□□ -0.79
KDM4B-207ENST00000588961 SLC44A5Q8NCS7 719 aa10.14□□□□□ -0.79
KDM4B-207ENST00000588961 NACAP1Q9BZK3 213 aa10.14□□□□□ -0.79
KDM4B-207ENST00000588961 BMP2KQ9NSY1 1161 aaPredicted RBP10.14□□□□□ -0.79
KDM4B-207ENST00000588961 SERPINB13Q9UIV8 391 aa10.14□□□□□ -0.79
KDM4B-207ENST00000588961 BAZ2AQ9UIF9 1905 aaKnown RBP10.13□□□□□ -0.79
KDM4B-207ENST00000588961 DDX60LQ5H9U9 1706 aaKnown RBP10.13□□□□□ -0.79
KDM4B-207ENST00000588961 SPDYE5A6NIY4 337 aa10.13□□□□□ -0.79
KDM4B-207ENST00000588961 FOXP2O15409 715 aa10.13□□□□□ -0.79
KDM4B-207ENST00000588961 LARGE1O95461 756 aa10.13□□□□□ -0.79
KDM4B-207ENST00000588961 PTPRAP18433 802 aa10.13□□□□□ -0.79
KDM4B-207ENST00000588961 SHMT1P34896 483 aa10.13□□□□□ -0.79
KDM4B-207ENST00000588961 CAP2P40123 477 aa10.13□□□□□ -0.79
KDM4B-207ENST00000588961 LIFRP42702 1097 aa10.13□□□□□ -0.79
KDM4B-207ENST00000588961 NASPP49321 788 aaPredicted RBP10.13□□□□□ -0.79
KDM4B-207ENST00000588961 ST3GAL1Q11201 340 aa10.13□□□□□ -0.79
KDM4B-207ENST00000588961 NOL9Q5SY16 702 aaKnown RBP10.13□□□□□ -0.79
KDM4B-207ENST00000588961 ERO1BQ86YB8 467 aa10.13□□□□□ -0.79
KDM4B-207ENST00000588961 AMOTL1Q8IY63 956 aa10.13□□□□□ -0.79
KDM4B-207ENST00000588961 NAPBQ9H115 298 aa10.13□□□□□ -0.79
KDM4B-207ENST00000588961 EHD4Q9H223 541 aa10.13□□□□□ -0.79
KDM4B-207ENST00000588961 PICK1Q9NRD5 415 aa10.13□□□□□ -0.79
KDM4B-207ENST00000588961 ZHX2Q9Y6X8 837 aa10.13□□□□□ -0.79
KDM4B-207ENST00000588961 IRF6O14896 467 aa10.12□□□□□ -0.79
KDM4B-207ENST00000588961 CDKL5O76039 1030 aa10.12□□□□□ -0.79
KDM4B-207ENST00000588961 ZBTB48P10074 688 aaPredicted RBP10.12□□□□□ -0.79
KDM4B-207ENST00000588961 CPA1P15085 419 aa10.12□□□□□ -0.79
KDM4B-207ENST00000588961 PDIA3P30101 505 aaKnown RBP10.12□□□□□ -0.79
KDM4B-207ENST00000588961 PPATQ06203 517 aa10.12□□□□□ -0.79
KDM4B-207ENST00000588961 GABPAQ06546 454 aa10.12□□□□□ -0.79
KDM4B-207ENST00000588961 CERKLQ49MI3 558 aaPredicted RBP10.12□□□□□ -0.79
KDM4B-207ENST00000588961 SBK1Q52WX2 424 aa10.12□□□□□ -0.79
KDM4B-207ENST00000588961 ASTLQ6HA08 431 aaPredicted RBP10.12□□□□□ -0.79
KDM4B-207ENST00000588961 TATDN1Q6P1N9 297 aa10.12□□□□□ -0.79
KDM4B-207ENST00000588961 CPLX2Q6PUV4 134 aaKnown RBP10.12□□□□□ -0.79
KDM4B-207ENST00000588961 STOX1Q6ZVD7 989 aa10.12□□□□□ -0.79
KDM4B-207ENST00000588961 NOL8Q76FK4 1167 aaKnown RBP10.12□□□□□ -0.79
KDM4B-207ENST00000588961 RALYLQ86SE5 291 aaKnown RBP10.12□□□□□ -0.79
KDM4B-207ENST00000588961 GAS2L3Q86XJ1 694 aa10.12□□□□□ -0.79
KDM4B-207ENST00000588961 MB21D2Q8IYB1 491 aaPredicted RBP10.12□□□□□ -0.79
KDM4B-207ENST00000588961 BRF1Q92994 677 aa10.12□□□□□ -0.79
KDM4B-207ENST00000588961 KRT23Q9C075 422 aa10.12□□□□□ -0.79
KDM4B-207ENST00000588961 RNF41Q9H4P4 317 aaPredicted RBP10.12□□□□□ -0.79
KDM4B-207ENST00000588961 TMEM63CQ9P1W3 806 aa10.12□□□□□ -0.79
KDM4B-207ENST00000588961 ARPP21Q9UBL0 812 aaPredicted RBP10.12□□□□□ -0.79
KDM4B-207ENST00000588961 MANSC4A6NHS7 340 aaPredicted RBP10.11□□□□□ -0.79
KDM4B-207ENST00000588961 TRIM75PA6NK02 468 aa10.11□□□□□ -0.79
KDM4B-207ENST00000588961 MPHOSPH10O00566 681 aaKnown RBP10.11□□□□□ -0.79
KDM4B-207ENST00000588961 ATMINO43313 823 aaPredicted RBP10.11□□□□□ -0.79
KDM4B-207ENST00000588961 GH2P01242 217 aa10.11□□□□□ -0.79
KDM4B-207ENST00000588961 HSPA1AP0DMV8 641 aaKnown RBP10.11□□□□□ -0.79
KDM4B-207ENST00000588961 HSPA1BP0DMV9 641 aaKnown RBP10.11□□□□□ -0.79
KDM4B-207ENST00000588961 CDK8P49336 464 aa10.11□□□□□ -0.79
KDM4B-207ENST00000588961 MAP2K1Q02750 393 aaPredicted RBP10.11□□□□□ -0.79
KDM4B-207ENST00000588961 CTDSPL2Q05D32 466 aa10.11□□□□□ -0.79
KDM4B-207ENST00000588961 SCRN1Q12765 414 aa10.11□□□□□ -0.79
KDM4B-207ENST00000588961 PPIL2Q13356 520 aa10.11□□□□□ -0.79
KDM4B-207ENST00000588961 SGMS1Q86VZ5 419 aa10.11□□□□□ -0.79
KDM4B-207ENST00000588961 NECAB1Q8N987 351 aa10.11□□□□□ -0.79
KDM4B-207ENST00000588961 NSUN7Q8NE18 718 aaKnown RBP10.11□□□□□ -0.79
KDM4B-207ENST00000588961 MS4A4AQ96JQ5 239 aa10.11□□□□□ -0.79
KDM4B-207ENST00000588961 ZNF396Q96N95 335 aaPredicted RBP10.11□□□□□ -0.79
KDM4B-207ENST00000588961 INCENPQ9NQS7 918 aa10.11□□□□□ -0.79
KDM4B-207ENST00000588961 WBP1LQ9NX94 342 aa10.11□□□□□ -0.79
KDM4B-207ENST00000588961 TSKSQ9UJT2 592 aa10.11□□□□□ -0.79
KDM4B-207ENST00000588961 ANAPC4Q9UJX5 808 aa10.11□□□□□ -0.79
KDM4B-207ENST00000588961 RCOR1Q9UKL0 485 aa10.11□□□□□ -0.79
KDM4B-207ENST00000588961 AFG3L2Q9Y4W6 797 aa10.11□□□□□ -0.79
KDM4B-207ENST00000588961 CCL15-CCL14A0A0B4J2E2 113 aa10.1□□□□□ -0.79
KDM4B-207ENST00000588961 TTLL13PA6NNM8 815 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms