RNA–Protein interactions for RNA: ENST00000586253.1

SMAD4-204, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 784 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-204ENST00000586253 SAP30BPQ9UHR5 308 aaKnown RBP9.59□□□□□ -0.87
SMAD4-204ENST00000586253 SERPINB13Q9UIV8 391 aa9.59□□□□□ -0.87
SMAD4-204ENST00000586253 ZMYM6O95789 1325 aa9.58□□□□□ -0.88
SMAD4-204ENST00000586253 CCDC171Q6TFL3 1326 aa9.58□□□□□ -0.88
SMAD4-204ENST00000586253 DOCK1Q14185 1865 aa9.58□□□□□ -0.88
SMAD4-204ENST00000586253 GABPAQ06546 454 aa9.58□□□□□ -0.88
SMAD4-204ENST00000586253 SBK1Q52WX2 424 aa9.58□□□□□ -0.88
SMAD4-204ENST00000586253 C12orf60Q5U649 245 aa9.58□□□□□ -0.88
SMAD4-204ENST00000586253 SPRYD7Q5W111 196 aa9.58□□□□□ -0.88
SMAD4-204ENST00000586253 TATDN1Q6P1N9 297 aa9.58□□□□□ -0.88
SMAD4-204ENST00000586253 ERO1BQ86YB8 467 aa9.58□□□□□ -0.88
SMAD4-204ENST00000586253 CRACR2BQ8N4Y2 399 aaPredicted RBP9.58□□□□□ -0.88
SMAD4-204ENST00000586253 JMYQ8N9B5 988 aa9.58□□□□□ -0.88
SMAD4-204ENST00000586253 CLMNQ96JQ2 1002 aa9.58□□□□□ -0.88
SMAD4-204ENST00000586253 DNAJC18Q9H819 358 aa9.58□□□□□ -0.88
SMAD4-204ENST00000586253 GINM1Q9NU53 330 aa9.58□□□□□ -0.88
SMAD4-204ENST00000586253 SWAP70Q9UH65 585 aa9.58□□□□□ -0.88
SMAD4-204ENST00000586253 ADGRG1Q9Y653 693 aa9.58□□□□□ -0.88
SMAD4-204ENST00000586253 SNCAIPQ9Y6H5 919 aa9.58□□□□□ -0.88
SMAD4-204ENST00000586253 RAD50Q92878 1312 aa9.57□□□□□ -0.88
SMAD4-204ENST00000586253 SPDYE5A6NIY4 337 aa9.57□□□□□ -0.88
SMAD4-204ENST00000586253 USP17L12C9JPN9 530 aa9.57□□□□□ -0.88
SMAD4-204ENST00000586253 USP17L21D6R901 530 aa9.57□□□□□ -0.88
SMAD4-204ENST00000586253 APPP05067 770 aa9.57□□□□□ -0.88
SMAD4-204ENST00000586253 CHMLP26374 656 aa9.57□□□□□ -0.88
SMAD4-204ENST00000586253 INPP5BP32019 993 aa9.57□□□□□ -0.88
SMAD4-204ENST00000586253 TDO2P48775 406 aa9.57□□□□□ -0.88
SMAD4-204ENST00000586253 PLCD1P51178 756 aa9.57□□□□□ -0.88
SMAD4-204ENST00000586253 PPATQ06203 517 aa9.57□□□□□ -0.88
SMAD4-204ENST00000586253 ALX1Q15699 326 aa9.57□□□□□ -0.88
SMAD4-204ENST00000586253 CTR9Q6PD62 1173 aa9.57□□□□□ -0.88
SMAD4-204ENST00000586253 CWC27Q6UX04 472 aaKnown RBP9.57□□□□□ -0.88
SMAD4-204ENST00000586253 SCYL3Q8IZE3 742 aa9.57□□□□□ -0.88
SMAD4-204ENST00000586253 IFNL3Q8IZI9 196 aa9.57□□□□□ -0.88
SMAD4-204ENST00000586253 RUFY2Q8WXA3 655 aa9.57□□□□□ -0.88
SMAD4-204ENST00000586253 ZKSCAN4Q969J2 545 aaPredicted RBP9.57□□□□□ -0.88
SMAD4-204ENST00000586253 OPTNQ96CV9 577 aa9.57□□□□□ -0.88
SMAD4-204ENST00000586253 WNK4Q96J92 1243 aa9.57□□□□□ -0.88
SMAD4-204ENST00000586253 TBC1D2Q9BYX2 928 aa9.57□□□□□ -0.88
SMAD4-204ENST00000586253 TMEM134Q9H6X4 195 aa9.57□□□□□ -0.88
SMAD4-204ENST00000586253 ELP3Q9H9T3 547 aa9.57□□□□□ -0.88
SMAD4-204ENST00000586253 EPB41L4AQ9HCS5 686 aaPredicted RBP9.57□□□□□ -0.88
SMAD4-204ENST00000586253 PICK1Q9NRD5 415 aa9.57□□□□□ -0.88
SMAD4-204ENST00000586253 ROBO3Q96MS0 1386 aa9.57□□□□□ -0.88
SMAD4-204ENST00000586253 ATAD5Q96QE3 1844 aa9.56□□□□□ -0.88
SMAD4-204ENST00000586253 FAM196BA6NMK8 535 aa9.56□□□□□ -0.88
SMAD4-204ENST00000586253 FOXP2O15409 715 aa9.56□□□□□ -0.88
SMAD4-204ENST00000586253 HSPD1P10809 573 aaKnown RBP9.56□□□□□ -0.88
SMAD4-204ENST00000586253 CAP2P40123 477 aa9.56□□□□□ -0.88
SMAD4-204ENST00000586253 MAP2K1Q02750 393 aaPredicted RBP9.56□□□□□ -0.88
SMAD4-204ENST00000586253 PPIL2Q13356 520 aa9.56□□□□□ -0.88
SMAD4-204ENST00000586253 BLOC1S3Q6QNY0 202 aa9.56□□□□□ -0.88
SMAD4-204ENST00000586253 CCDC129Q6ZRS4 1044 aa9.56□□□□□ -0.88
SMAD4-204ENST00000586253 ZNF589Q86UQ0 364 aaPredicted RBP9.56□□□□□ -0.88
SMAD4-204ENST00000586253 SKAP1Q86WV1 359 aa9.56□□□□□ -0.88
SMAD4-204ENST00000586253 NAPBQ9H115 298 aa9.56□□□□□ -0.88
SMAD4-204ENST00000586253 MYH8P13535 1937 aa9.56□□□□□ -0.88
SMAD4-204ENST00000586253 PHIPQ8WWQ0 1821 aa9.55□□□□□ -0.88
SMAD4-204ENST00000586253 MANSC4A6NHS7 340 aaPredicted RBP9.55□□□□□ -0.88
SMAD4-204ENST00000586253 RNF223E7ERA6 249 aa9.55□□□□□ -0.88
SMAD4-204ENST00000586253 TRIM66O15016 1216 aa9.55□□□□□ -0.88
SMAD4-204ENST00000586253 GPR37O15354 613 aa9.55□□□□□ -0.88
SMAD4-204ENST00000586253 AOC2O75106 756 aa9.55□□□□□ -0.88
SMAD4-204ENST00000586253 ASNSP08243 561 aa9.55□□□□□ -0.88
SMAD4-204ENST00000586253 SLURP2P0DP57 97 aa9.55□□□□□ -0.88
SMAD4-204ENST00000586253 CYP2D6P10635 497 aa9.55□□□□□ -0.88
SMAD4-204ENST00000586253 PTPRAP18433 802 aa9.55□□□□□ -0.88
SMAD4-204ENST00000586253 SHMT1P34896 483 aa9.55□□□□□ -0.88
SMAD4-204ENST00000586253 GJA5P36382 358 aa9.55□□□□□ -0.88
SMAD4-204ENST00000586253 INHBEP58166 350 aa9.55□□□□□ -0.88
SMAD4-204ENST00000586253 SREBF2Q12772 1141 aa9.55□□□□□ -0.88
SMAD4-204ENST00000586253 GRM1Q13255 1194 aa9.55□□□□□ -0.88
SMAD4-204ENST00000586253 SLC4A8Q2Y0W8 1093 aa9.55□□□□□ -0.88
SMAD4-204ENST00000586253 C16orf86Q6ZW13 317 aa9.55□□□□□ -0.88
SMAD4-204ENST00000586253 DSCC1Q9BVC3 393 aa9.55□□□□□ -0.88
SMAD4-204ENST00000586253 KDM4CQ9H3R0 1056 aa9.55□□□□□ -0.88
SMAD4-204ENST00000586253 ZNF287Q9HBT7 754 aa9.55□□□□□ -0.88
SMAD4-204ENST00000586253 PCNTO95613 3336 aa9.55□□□□□ -0.88
SMAD4-204ENST00000586253 CYP2D7A0A087X1C5 515 aa9.54□□□□□ -0.88
SMAD4-204ENST00000586253 CXCL11O14625 94 aa9.54□□□□□ -0.88
SMAD4-204ENST00000586253 SGSM2O43147 1006 aa9.54□□□□□ -0.88
SMAD4-204ENST00000586253 FGAP02671 866 aa9.54□□□□□ -0.88
SMAD4-204ENST00000586253 SLC3A2P08195 630 aaKnown RBP9.54□□□□□ -0.88
SMAD4-204ENST00000586253 DNAJB2P25686 324 aa9.54□□□□□ -0.88
SMAD4-204ENST00000586253 TM4SF4P48230 202 aa9.54□□□□□ -0.88
SMAD4-204ENST00000586253 CDK8P49336 464 aa9.54□□□□□ -0.88
SMAD4-204ENST00000586253 GTF2A2P52657 109 aa9.54□□□□□ -0.88
SMAD4-204ENST00000586253 KIF23Q02241 960 aaPredicted RBP9.54□□□□□ -0.88
SMAD4-204ENST00000586253 PPARAQ07869 468 aa9.54□□□□□ -0.88
SMAD4-204ENST00000586253 PDE4DQ08499 809 aa9.54□□□□□ -0.88
SMAD4-204ENST00000586253 SNAPC2Q13487 334 aa9.54□□□□□ -0.88
SMAD4-204ENST00000586253 RRP1BQ14684 758 aaKnown RBP9.54□□□□□ -0.88
SMAD4-204ENST00000586253 CERKLQ49MI3 558 aaPredicted RBP9.54□□□□□ -0.88
SMAD4-204ENST00000586253 VPS53Q5VIR6 699 aa9.54□□□□□ -0.88
SMAD4-204ENST00000586253 CASC1Q6TDU7 716 aa9.54□□□□□ -0.88
SMAD4-204ENST00000586253 CCDC17Q96LX7 622 aa9.54□□□□□ -0.88
SMAD4-204ENST00000586253 ANAPC4Q9UJX5 808 aa9.54□□□□□ -0.88
SMAD4-204ENST00000586253 ZBTB21Q9ULJ3 1066 aa9.54□□□□□ -0.88
SMAD4-204ENST00000586253 KCNH4Q9UQ05 1017 aa9.54□□□□□ -0.88
SMAD4-204ENST00000586253 PCDHB3Q9Y5E6 796 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms