RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 IRF6O14896 467 aa14.82□□□□□ -0.04
VMP1-202ENST00000585847 KDM4AO75164 1064 aa14.82□□□□□ -0.04
VMP1-202ENST00000585847 FGD1P98174 961 aa14.82□□□□□ -0.04
VMP1-202ENST00000585847 PPATQ06203 517 aa14.82□□□□□ -0.04
VMP1-202ENST00000585847 PPIL2Q13356 520 aa14.82□□□□□ -0.04
VMP1-202ENST00000585847 MOGSQ13724 837 aa14.82□□□□□ -0.04
VMP1-202ENST00000585847 TMTC2Q8N394 836 aa14.82□□□□□ -0.04
VMP1-202ENST00000585847 ESR2Q92731 530 aa14.82□□□□□ -0.04
VMP1-202ENST00000585847 OTUD5Q96G74 571 aa14.82□□□□□ -0.04
VMP1-202ENST00000585847 CEP95Q96GE4 821 aa14.82□□□□□ -0.04
VMP1-202ENST00000585847 MS4A4AQ96JQ5 239 aa14.82□□□□□ -0.04
VMP1-202ENST00000585847 WDR18Q9BV38 432 aa14.82□□□□□ -0.04
VMP1-202ENST00000585847 TCP11L1Q9NUJ3 509 aa14.82□□□□□ -0.04
VMP1-202ENST00000585847 KCNH4Q9UQ05 1017 aa14.82□□□□□ -0.04
VMP1-202ENST00000585847 LOC285556D6RIA3 1793 aa14.81□□□□□ -0.04
VMP1-202ENST00000585847 TSPY2A6NKD2 308 aa14.81□□□□□ -0.04
VMP1-202ENST00000585847 DHX16O60231 1041 aaKnown RBP14.81□□□□□ -0.04
VMP1-202ENST00000585847 RANBP6O60518 1105 aaKnown RBP14.81□□□□□ -0.04
VMP1-202ENST00000585847 AK2P54819 239 aa14.81□□□□□ -0.04
VMP1-202ENST00000585847 EVCP57679 992 aa14.81□□□□□ -0.04
VMP1-202ENST00000585847 MKRN3Q13064 507 aaKnown RBP14.81□□□□□ -0.04
VMP1-202ENST00000585847 RAB3GAP1Q15042 981 aa14.81□□□□□ -0.04
VMP1-202ENST00000585847 KIAA1755Q5JYT7 1200 aa14.81□□□□□ -0.04
VMP1-202ENST00000585847 PPP4R3BQ5MIZ7 849 aa14.81□□□□□ -0.04
VMP1-202ENST00000585847 RCSD1Q6JBY9 416 aa14.81□□□□□ -0.04
VMP1-202ENST00000585847 TMX3Q96JJ7 454 aa14.81□□□□□ -0.04
VMP1-202ENST00000585847 CABP5Q9NP86 173 aa14.81□□□□□ -0.04
VMP1-202ENST00000585847 PICK1Q9NRD5 415 aa14.81□□□□□ -0.04
VMP1-202ENST00000585847 RNF186Q9NXI6 227 aa14.81□□□□□ -0.04
VMP1-202ENST00000585847 MTMR4Q9NYA4 1195 aa14.81□□□□□ -0.04
VMP1-202ENST00000585847 KIF3AQ9Y496 699 aa14.81□□□□□ -0.04
VMP1-202ENST00000585847 TSPY3P0CV98 308 aa14.8□□□□□ -0.04
VMP1-202ENST00000585847 TSPY8P0CW00 308 aa14.8□□□□□ -0.04
VMP1-202ENST00000585847 ZBTB48P10074 688 aaPredicted RBP14.8□□□□□ -0.04
VMP1-202ENST00000585847 EEF2P13639 858 aaKnown RBP14.8□□□□□ -0.04
VMP1-202ENST00000585847 EXOSC10Q01780 885 aaKnown RBP14.8□□□□□ -0.04
VMP1-202ENST00000585847 SPP2Q13103 211 aa14.8□□□□□ -0.04
VMP1-202ENST00000585847 SEC23AQ15436 765 aa14.8□□□□□ -0.04
VMP1-202ENST00000585847 REM2Q8IYK8 340 aaPredicted RBP14.8□□□□□ -0.04
VMP1-202ENST00000585847 ZNF280CQ8ND82 737 aa14.8□□□□□ -0.04
VMP1-202ENST00000585847 RGS22Q8NE09 1264 aa14.8□□□□□ -0.04
VMP1-202ENST00000585847 ZKSCAN3Q9BRR0 538 aa14.8□□□□□ -0.04
VMP1-202ENST00000585847 TOMM22Q9NS69 142 aa14.8□□□□□ -0.04
VMP1-202ENST00000585847 CHMP5Q9NZZ3 219 aa14.8□□□□□ -0.04
VMP1-202ENST00000585847 NYAP2Q9P242 653 aa14.8□□□□□ -0.04
VMP1-202ENST00000585847 ERICH2A1L162 156 aa14.79□□□□□ -0.04
VMP1-202ENST00000585847 TESPA1A2RU30 521 aaPredicted RBP14.79□□□□□ -0.04
VMP1-202ENST00000585847 CXCL11O14625 94 aa14.79□□□□□ -0.04
VMP1-202ENST00000585847 TNRC18O15417 2968 aaPredicted RBP14.79□□□□□ -0.04
VMP1-202ENST00000585847 CPA1P15085 419 aa14.79□□□□□ -0.04
VMP1-202ENST00000585847 LIFRP42702 1097 aa14.79□□□□□ -0.04
VMP1-202ENST00000585847 SOX10P56693 466 aa14.79□□□□□ -0.04
VMP1-202ENST00000585847 NUCB2P80303 420 aa14.79□□□□□ -0.04
VMP1-202ENST00000585847 ICA1Q05084 483 aa14.79□□□□□ -0.04
VMP1-202ENST00000585847 PPP2R5BQ15173 497 aa14.79□□□□□ -0.04
VMP1-202ENST00000585847 SH3D19Q5HYK7 790 aa14.79□□□□□ -0.04
VMP1-202ENST00000585847 CHST3Q7LGC8 479 aa14.79□□□□□ -0.04
VMP1-202ENST00000585847 MKL1Q969V6 931 aa14.79□□□□□ -0.04
VMP1-202ENST00000585847 ZNF274Q96GC6 653 aaPredicted RBP14.79□□□□□ -0.04
VMP1-202ENST00000585847 LLPHQ9BRT6 129 aaKnown RBP14.79□□□□□ -0.04
VMP1-202ENST00000585847 KANSL2Q9H9L4 492 aa14.79□□□□□ -0.04
VMP1-202ENST00000585847 SENP2Q9HC62 589 aa14.79□□□□□ -0.04
VMP1-202ENST00000585847 A0A0G2JLL6 359 aaPredicted RBP14.78□□□□□ -0.04
VMP1-202ENST00000585847 TRIM75PA6NK02 468 aa14.78□□□□□ -0.04
VMP1-202ENST00000585847 PRC1O43663 620 aa14.78□□□□□ -0.04
VMP1-202ENST00000585847 PDCP20941 246 aa14.78□□□□□ -0.04
VMP1-202ENST00000585847 PRRT2Q7Z6L0 340 aaPredicted RBP14.78□□□□□ -0.04
VMP1-202ENST00000585847 IQCA1Q86XH1 822 aa14.78□□□□□ -0.04
VMP1-202ENST00000585847 IGDCC4Q8TDY8 1250 aa14.78□□□□□ -0.04
VMP1-202ENST00000585847 BRI3BPQ8WY22 251 aa14.78□□□□□ -0.04
VMP1-202ENST00000585847 ANKS1AQ92625 1134 aa14.78□□□□□ -0.04
VMP1-202ENST00000585847 GPHNQ9NQX3 736 aaPredicted RBP14.78□□□□□ -0.04
VMP1-202ENST00000585847 EMILIN3Q9NT22 766 aa14.78□□□□□ -0.04
VMP1-202ENST00000585847 TMX2Q9Y320 296 aa14.78□□□□□ -0.04
VMP1-202ENST00000585847 RLFQ13129 1914 aa14.77□□□□□ -0.04
VMP1-202ENST00000585847 CD2BP2O95400 341 aaKnown RBP14.77□□□□□ -0.05
VMP1-202ENST00000585847 BACE1P56817 501 aa14.77□□□□□ -0.05
VMP1-202ENST00000585847 MTMR2Q13614 643 aa14.77□□□□□ -0.05
VMP1-202ENST00000585847 GPAT2Q6NUI2 795 aa14.77□□□□□ -0.05
VMP1-202ENST00000585847 CTU1Q7Z7A3 348 aaKnown RBP14.77□□□□□ -0.05
VMP1-202ENST00000585847 SGMS1Q86VZ5 419 aa14.77□□□□□ -0.05
VMP1-202ENST00000585847 ENAHQ8N8S7 591 aaPredicted RBP14.77□□□□□ -0.05
VMP1-202ENST00000585847 C12orf42Q96LP6 360 aa14.77□□□□□ -0.05
VMP1-202ENST00000585847 TCEANC2Q96MN5 208 aa14.77□□□□□ -0.05
VMP1-202ENST00000585847 ZSCAN10Q96SZ4 725 aaPredicted RBP14.77□□□□□ -0.05
VMP1-202ENST00000585847 PTPN18Q99952 460 aa14.77□□□□□ -0.05
VMP1-202ENST00000585847 KIAA1683Q9H0B3 1180 aa14.77□□□□□ -0.05
VMP1-202ENST00000585847 AS3MTQ9HBK9 375 aa14.77□□□□□ -0.05
VMP1-202ENST00000585847 CLIP2Q9UDT6 1046 aa14.77□□□□□ -0.05
VMP1-202ENST00000585847 PARP14Q460N5 1801 aa14.77□□□□□ -0.05
VMP1-202ENST00000585847 NID2Q14112 1375 aa14.76□□□□□ -0.05
VMP1-202ENST00000585847 TNKSO95271 1327 aa14.76□□□□□ -0.05
VMP1-202ENST00000585847 USP17L10C9JJH3 530 aa14.76□□□□□ -0.05
VMP1-202ENST00000585847 TTLL1O95922 423 aa14.76□□□□□ -0.05
VMP1-202ENST00000585847 DDIT3P35638 169 aa14.76□□□□□ -0.05
VMP1-202ENST00000585847 RASGRP2Q7LDG7 609 aa14.76□□□□□ -0.05
VMP1-202ENST00000585847 POTEDQ86YR6 584 aa14.76□□□□□ -0.05
VMP1-202ENST00000585847 LRRC47Q8N1G4 583 aaKnown RBP14.76□□□□□ -0.05
VMP1-202ENST00000585847 TMEM47Q9BQJ4 181 aa14.76□□□□□ -0.05
VMP1-202ENST00000585847 UBAC1Q9BSL1 405 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms