RNA–Protein interactions for RNA: ENST00000584042.1

CDK5RAP3-230, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 638 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-230ENST00000584042 GMCL1P1Q8NEA9 526 aa19.51■□□□□ 0.71
CDK5RAP3-230ENST00000584042 CTCFLQ8NI51 663 aaPredicted RBP19.51■□□□□ 0.71
CDK5RAP3-230ENST00000584042 PICK1Q9NRD5 415 aa19.51■□□□□ 0.71
CDK5RAP3-230ENST00000584042 USP17L5A8MUK1 530 aa19.5■□□□□ 0.71
CDK5RAP3-230ENST00000584042 TRAF5O00463 557 aa19.5■□□□□ 0.71
CDK5RAP3-230ENST00000584042 CDKL5O76039 1030 aa19.5■□□□□ 0.71
CDK5RAP3-230ENST00000584042 SLC4A3P48751 1232 aa19.5■□□□□ 0.71
CDK5RAP3-230ENST00000584042 FKBP1BP68106 108 aa19.5■□□□□ 0.71
CDK5RAP3-230ENST00000584042 CCT2P78371 535 aaKnown RBP19.5■□□□□ 0.71
CDK5RAP3-230ENST00000584042 MAP3K9P80192 1104 aa19.5■□□□□ 0.71
CDK5RAP3-230ENST00000584042 ATP2B2Q01814 1243 aa19.5■□□□□ 0.71
CDK5RAP3-230ENST00000584042 CPLX2Q6PUV4 134 aaKnown RBP19.5■□□□□ 0.71
CDK5RAP3-230ENST00000584042 ARMC9Q7Z3E5 817 aa19.5■□□□□ 0.71
CDK5RAP3-230ENST00000584042 FANCBQ8NB91 859 aa19.5■□□□□ 0.71
CDK5RAP3-230ENST00000584042 AS3MTQ9HBK9 375 aa19.5■□□□□ 0.71
CDK5RAP3-230ENST00000584042 NCOA5Q9HCD5 579 aaKnown RBP19.5■□□□□ 0.71
CDK5RAP3-230ENST00000584042 FZD1Q9UP38 647 aa19.5■□□□□ 0.71
CDK5RAP3-230ENST00000584042 TMX2Q9Y320 296 aa19.5■□□□□ 0.71
CDK5RAP3-230ENST00000584042 CSADQ9Y600 493 aa19.5■□□□□ 0.71
CDK5RAP3-230ENST00000584042 SNCAIPQ9Y6H5 919 aa19.5■□□□□ 0.71
CDK5RAP3-230ENST00000584042 PTPRFP10586 1907 aa19.5■□□□□ 0.71
CDK5RAP3-230ENST00000584042 UNCXA6NJT0 531 aa19.49■□□□□ 0.71
CDK5RAP3-230ENST00000584042 KIF3CO14782 793 aa19.49■□□□□ 0.71
CDK5RAP3-230ENST00000584042 CPLX1O14810 134 aa19.49■□□□□ 0.71
CDK5RAP3-230ENST00000584042 PDHBP11177 359 aa19.49■□□□□ 0.71
CDK5RAP3-230ENST00000584042 CDC27P30260 824 aa19.49■□□□□ 0.71
CDK5RAP3-230ENST00000584042 PRKG1Q13976 671 aa19.49■□□□□ 0.71
CDK5RAP3-230ENST00000584042 VGLL4Q14135 290 aa19.49■□□□□ 0.71
CDK5RAP3-230ENST00000584042 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.49■□□□□ 0.71
CDK5RAP3-230ENST00000584042 ANKRD13AQ8IZ07 590 aa19.49■□□□□ 0.71
CDK5RAP3-230ENST00000584042 NSUN7Q8NE18 718 aaKnown RBP19.49■□□□□ 0.71
CDK5RAP3-230ENST00000584042 SMARCC2Q8TAQ2 1214 aa19.49■□□□□ 0.71
CDK5RAP3-230ENST00000584042 DCAF4Q8WV16 495 aa19.49■□□□□ 0.71
CDK5RAP3-230ENST00000584042 ZKSCAN4Q969J2 545 aaPredicted RBP19.49■□□□□ 0.71
CDK5RAP3-230ENST00000584042 WDR18Q9BV38 432 aa19.49■□□□□ 0.71
CDK5RAP3-230ENST00000584042 FAM217BQ9NTX9 383 aaPredicted RBP19.49■□□□□ 0.71
CDK5RAP3-230ENST00000584042 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.49■□□□□ 0.71
CDK5RAP3-230ENST00000584042 LOC285556D6RIA3 1793 aa19.48■□□□□ 0.71
CDK5RAP3-230ENST00000584042 A0A1W2PRG0 241 aa19.48■□□□□ 0.71
CDK5RAP3-230ENST00000584042 PTPRAP18433 802 aa19.48■□□□□ 0.71
CDK5RAP3-230ENST00000584042 GNAQP50148 359 aa19.48■□□□□ 0.71
CDK5RAP3-230ENST00000584042 HMGN5P82970 282 aaKnown RBP19.48■□□□□ 0.71
CDK5RAP3-230ENST00000584042 TTLL12Q14166 644 aaPredicted RBP19.48■□□□□ 0.71
CDK5RAP3-230ENST00000584042 ASPRV1Q53RT3 343 aa19.48■□□□□ 0.71
CDK5RAP3-230ENST00000584042 TMTC3Q6ZXV5 915 aa19.48■□□□□ 0.71
CDK5RAP3-230ENST00000584042 CCDC144CPQ8IYA2 1237 aa19.48■□□□□ 0.71
CDK5RAP3-230ENST00000584042 GMCL1Q96IK5 515 aa19.48■□□□□ 0.71
CDK5RAP3-230ENST00000584042 GOPCQ9HD26 462 aa19.48■□□□□ 0.71
CDK5RAP3-230ENST00000584042 MYH6P13533 1939 aa19.48■□□□□ 0.71
CDK5RAP3-230ENST00000584042 STK36Q9NRP7 1315 aa19.48■□□□□ 0.71
CDK5RAP3-230ENST00000584042 CTDNEP1O95476 244 aa19.47■□□□□ 0.71
CDK5RAP3-230ENST00000584042 ITGBL1O95965 494 aaPredicted RBP19.47■□□□□ 0.71
CDK5RAP3-230ENST00000584042 PARP1P09874 1014 aaKnown RBP19.47■□□□□ 0.71
CDK5RAP3-230ENST00000584042 IFNAR1P17181 557 aa19.47■□□□□ 0.71
CDK5RAP3-230ENST00000584042 ECE1P42892 770 aa19.47■□□□□ 0.71
CDK5RAP3-230ENST00000584042 NTRK3Q16288 839 aa19.47■□□□□ 0.71
CDK5RAP3-230ENST00000584042 ACER1Q8TDN7 264 aa19.47■□□□□ 0.71
CDK5RAP3-230ENST00000584042 KIAA1683Q9H0B3 1180 aa19.47■□□□□ 0.71
CDK5RAP3-230ENST00000584042 VCPKMTQ9H867 229 aa19.47■□□□□ 0.71
CDK5RAP3-230ENST00000584042 MAD2L2Q9UI95 211 aa19.47■□□□□ 0.71
CDK5RAP3-230ENST00000584042 SMC3Q9UQE7 1217 aa19.47■□□□□ 0.71
CDK5RAP3-230ENST00000584042 PTPDC1A2A3K4 754 aa19.46■□□□□ 0.71
CDK5RAP3-230ENST00000584042 PALM3A6NDB9 673 aaPredicted RBP19.46■□□□□ 0.71
CDK5RAP3-230ENST00000584042 NDUFB10O96000 172 aa19.46■□□□□ 0.71
CDK5RAP3-230ENST00000584042 ADD1P35611 737 aaKnown RBP19.46■□□□□ 0.71
CDK5RAP3-230ENST00000584042 USP14P54578 494 aa19.46■□□□□ 0.71
CDK5RAP3-230ENST00000584042 GPATCH4Q5T3I0 446 aaKnown RBP19.46■□□□□ 0.71
CDK5RAP3-230ENST00000584042 LDLRAD1Q5T700 205 aa19.46■□□□□ 0.71
CDK5RAP3-230ENST00000584042 SLFN13Q68D06 897 aa19.46■□□□□ 0.71
CDK5RAP3-230ENST00000584042 RASGRP2Q7LDG7 609 aa19.46■□□□□ 0.71
CDK5RAP3-230ENST00000584042 CCDC84Q86UT8 332 aaPredicted RBP19.46■□□□□ 0.71
CDK5RAP3-230ENST00000584042 FEZ1Q99689 392 aa19.46■□□□□ 0.71
CDK5RAP3-230ENST00000584042 LZTS2Q9BRK4 669 aa19.46■□□□□ 0.71
CDK5RAP3-230ENST00000584042 GBA2Q9HCG7 927 aaPredicted RBP19.46■□□□□ 0.71
CDK5RAP3-230ENST00000584042 CWC22Q9HCG8 908 aaKnown RBP19.46■□□□□ 0.71
CDK5RAP3-230ENST00000584042 CNTNAP5Q8WYK1 1306 aa19.46■□□□□ 0.71
CDK5RAP3-230ENST00000584042 SPDYE5A6NIY4 337 aa19.45■□□□□ 0.7
CDK5RAP3-230ENST00000584042 F5H6K3 240 aa19.45■□□□□ 0.7
CDK5RAP3-230ENST00000584042 CELF2O95319 508 aaKnown RBP19.45■□□□□ 0.7
CDK5RAP3-230ENST00000584042 KLRC3Q07444 240 aa19.45■□□□□ 0.7
CDK5RAP3-230ENST00000584042 ZNF543Q08ER8 600 aa19.45■□□□□ 0.7
CDK5RAP3-230ENST00000584042 ZNF280CQ8ND82 737 aa19.45■□□□□ 0.7
CDK5RAP3-230ENST00000584042 SMC1BQ8NDV3 1235 aa19.45■□□□□ 0.7
CDK5RAP3-230ENST00000584042 LPAR1Q92633 364 aa19.45■□□□□ 0.7
CDK5RAP3-230ENST00000584042 ZNF408Q9H9D4 720 aa19.45■□□□□ 0.7
CDK5RAP3-230ENST00000584042 FOXD4L1Q9NU39 408 aa19.45■□□□□ 0.7
CDK5RAP3-230ENST00000584042 KIF3AQ9Y496 699 aa19.45■□□□□ 0.7
CDK5RAP3-230ENST00000584042 PASKQ96RG2 1323 aa19.45■□□□□ 0.7
CDK5RAP3-230ENST00000584042 JAK2O60674 1132 aa19.44■□□□□ 0.7
CDK5RAP3-230ENST00000584042 PLEKHA8P1O95397 391 aa19.44■□□□□ 0.7
CDK5RAP3-230ENST00000584042 FMR1Q06787 632 aaKnown RBP eCLIP19.44■□□□□ 0.7
CDK5RAP3-230ENST00000584042 FUT2Q10981 343 aa19.44■□□□□ 0.7
CDK5RAP3-230ENST00000584042 CCDC96Q2M329 555 aa19.44■□□□□ 0.7
CDK5RAP3-230ENST00000584042 ERO1BQ86YB8 467 aa19.44■□□□□ 0.7
CDK5RAP3-230ENST00000584042 SPZ1Q9BXG8 430 aa19.44■□□□□ 0.7
CDK5RAP3-230ENST00000584042 RNF26Q9BY78 433 aaPredicted RBP19.44■□□□□ 0.7
CDK5RAP3-230ENST00000584042 MTMR7Q9Y216 660 aa19.44■□□□□ 0.7
CDK5RAP3-230ENST00000584042 USP17L10C9JJH3 530 aa19.43■□□□□ 0.7
CDK5RAP3-230ENST00000584042 FMNL1O95466 1100 aaPredicted RBP19.43■□□□□ 0.7
CDK5RAP3-230ENST00000584042 SMARCA1P28370 1054 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms