RNA–Protein interactions for RNA: ENST00000583988.1

PPP4R1-227, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-227ENST00000583988 KLHL3Q9UH77 587 aa6.39□□□□□ -1.39
PPP4R1-227ENST00000583988 PCDHB14Q9Y5E9 798 aa6.39□□□□□ -1.39
PPP4R1-227ENST00000583988 WASH4PA8MWX3 477 aa6.38□□□□□ -1.39
PPP4R1-227ENST00000583988 C8AP07357 584 aa6.38□□□□□ -1.39
PPP4R1-227ENST00000583988 GJA8P48165 433 aa6.38□□□□□ -1.39
PPP4R1-227ENST00000583988 TNNI2P48788 182 aa6.38□□□□□ -1.39
PPP4R1-227ENST00000583988 PPP1R13LQ8WUF5 828 aa6.38□□□□□ -1.39
PPP4R1-227ENST00000583988 CYB5D2Q8WUJ1 264 aa6.38□□□□□ -1.39
PPP4R1-227ENST00000583988 TMEM40Q8WWA1 233 aa6.38□□□□□ -1.39
PPP4R1-227ENST00000583988 SLAMF8Q9P0V8 285 aa6.38□□□□□ -1.39
PPP4R1-227ENST00000583988 REV1Q9UBZ9 1251 aa6.38□□□□□ -1.39
PPP4R1-227ENST00000583988 MCM4P33991 863 aa6.37□□□□□ -1.39
PPP4R1-227ENST00000583988 AFMP43652 599 aa6.37□□□□□ -1.39
PPP4R1-227ENST00000583988 CLCQ05315 142 aa6.37□□□□□ -1.39
PPP4R1-227ENST00000583988 FYB2Q5VWT5 728 aa6.37□□□□□ -1.39
PPP4R1-227ENST00000583988 VPS37DQ86XT2 251 aa6.37□□□□□ -1.39
PPP4R1-227ENST00000583988 SLFN12Q8IYM2 578 aa6.37□□□□□ -1.39
PPP4R1-227ENST00000583988 PIWIL2Q8TC59 973 aaKnown RBP6.37□□□□□ -1.39
PPP4R1-227ENST00000583988 GPRASP2Q96D09 838 aa6.37□□□□□ -1.39
PPP4R1-227ENST00000583988 Q96M66 194 aa6.37□□□□□ -1.39
PPP4R1-227ENST00000583988 LRRC10BA6NIK2 292 aa6.36□□□□□ -1.39
PPP4R1-227ENST00000583988 SLC22A31A6NKX4 558 aa6.36□□□□□ -1.39
PPP4R1-227ENST00000583988 CHURC1-FNTBB4DL54 471 aa6.36□□□□□ -1.39
PPP4R1-227ENST00000583988 MLECQ14165 292 aa6.36□□□□□ -1.39
PPP4R1-227ENST00000583988 GK5Q6ZS86 529 aa6.36□□□□□ -1.39
PPP4R1-227ENST00000583988 CREG2Q8IUH2 290 aa6.36□□□□□ -1.39
PPP4R1-227ENST00000583988 PHACTR4Q8IZ21 702 aa6.36□□□□□ -1.39
PPP4R1-227ENST00000583988 ALPK1Q96QP1 1244 aa6.36□□□□□ -1.39
PPP4R1-227ENST00000583988 INPP5FQ9Y2H2 1132 aa6.36□□□□□ -1.39
PPP4R1-227ENST00000583988 ZNF503-AS2A6NEH8 195 aa6.35□□□□□ -1.39
PPP4R1-227ENST00000583988 DNAJA2O60884 412 aa6.35□□□□□ -1.39
PPP4R1-227ENST00000583988 LRRN2O75325 713 aa6.35□□□□□ -1.39
PPP4R1-227ENST00000583988 FARP2O94887 1054 aaPredicted RBP6.35□□□□□ -1.39
PPP4R1-227ENST00000583988 TPP2P29144 1249 aaPredicted RBP6.35□□□□□ -1.39
PPP4R1-227ENST00000583988 SOX9P48436 509 aa6.35□□□□□ -1.39
PPP4R1-227ENST00000583988 MPZL3Q6UWV2 235 aa6.35□□□□□ -1.39
PPP4R1-227ENST00000583988 TMPRSS7Q7RTY8 843 aa6.35□□□□□ -1.39
PPP4R1-227ENST00000583988 BAHD1Q8TBE0 780 aaPredicted RBP6.35□□□□□ -1.39
PPP4R1-227ENST00000583988 LIN37Q96GY3 246 aaPredicted RBP6.35□□□□□ -1.39
PPP4R1-227ENST00000583988 KIRREL1Q96J84 757 aa6.35□□□□□ -1.39
PPP4R1-227ENST00000583988 SEC16BQ96JE7 1060 aa6.35□□□□□ -1.39
PPP4R1-227ENST00000583988 GMLQ99445 158 aa6.35□□□□□ -1.39
PPP4R1-227ENST00000583988 DUSP15Q9H1R2 295 aaPredicted RBP6.35□□□□□ -1.39
PPP4R1-227ENST00000583988 TRIT1Q9H3H1 467 aaKnown RBP6.35□□□□□ -1.39
PPP4R1-227ENST00000583988 C19orf73Q9NVV2 129 aa6.35□□□□□ -1.39
PPP4R1-227ENST00000583988 GMIPQ9P107 970 aa6.35□□□□□ -1.39
PPP4R1-227ENST00000583988 KCNH3Q9ULD8 1083 aa6.35□□□□□ -1.39
PPP4R1-227ENST00000583988 DNAJC25-GNG10A0A024R161 153 aa6.34□□□□□ -1.39
PPP4R1-227ENST00000583988 BTBD11A6QL63 1104 aa6.34□□□□□ -1.39
PPP4R1-227ENST00000583988 ESR1P03372 595 aa6.34□□□□□ -1.39
PPP4R1-227ENST00000583988 GDNFP39905 211 aa6.34□□□□□ -1.39
PPP4R1-227ENST00000583988 HK2P52789 917 aa6.34□□□□□ -1.39
PPP4R1-227ENST00000583988 CHMP4BP1P59074 171 aa6.34□□□□□ -1.39
PPP4R1-227ENST00000583988 ZNF124Q15973 351 aa6.34□□□□□ -1.39
PPP4R1-227ENST00000583988 MLANAQ16655 118 aa6.34□□□□□ -1.39
PPP4R1-227ENST00000583988 LRRFIP1Q32MZ4 808 aaKnown RBP6.34□□□□□ -1.39
PPP4R1-227ENST00000583988 RALGPS1Q5JS13 557 aa6.34□□□□□ -1.39
PPP4R1-227ENST00000583988 CDCP2Q5VXM1 449 aa6.34□□□□□ -1.39
PPP4R1-227ENST00000583988 TTC6Q86TZ1 520 aa6.34□□□□□ -1.39
PPP4R1-227ENST00000583988 KSR1Q8IVT5 923 aa6.34□□□□□ -1.39
PPP4R1-227ENST00000583988 DTWD2Q8NBA8 298 aa6.34□□□□□ -1.39
PPP4R1-227ENST00000583988 CCDC74BQ96LY2 380 aa6.34□□□□□ -1.39
PPP4R1-227ENST00000583988 TINF2Q9BSI4 451 aa6.34□□□□□ -1.39
PPP4R1-227ENST00000583988 GINM1Q9NU53 330 aa6.34□□□□□ -1.39
PPP4R1-227ENST00000583988 GPATCH2Q9NW75 528 aa6.34□□□□□ -1.39
PPP4R1-227ENST00000583988 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.34□□□□□ -1.39
PPP4R1-227ENST00000583988 ZNRF3Q9ULT6 936 aa6.34□□□□□ -1.39
PPP4R1-227ENST00000583988 IMPDH2P12268 514 aa6.33□□□□□ -1.4
PPP4R1-227ENST00000583988 PKN1Q16512 942 aa6.33□□□□□ -1.4
PPP4R1-227ENST00000583988 TMEM67Q5HYA8 995 aa6.33□□□□□ -1.4
PPP4R1-227ENST00000583988 RNF141Q8WVD5 230 aa6.33□□□□□ -1.4
PPP4R1-227ENST00000583988 CCDC120Q96HB5 630 aa6.33□□□□□ -1.4
PPP4R1-227ENST00000583988 KREMEN1Q96MU8 473 aa6.33□□□□□ -1.4
PPP4R1-227ENST00000583988 KIF2CQ99661 725 aa6.33□□□□□ -1.4
PPP4R1-227ENST00000583988 DUSP13Q9UII6 198 aa6.33□□□□□ -1.4
PPP4R1-227ENST00000583988 STRIP2Q9ULQ0 834 aa6.33□□□□□ -1.4
PPP4R1-227ENST00000583988 EFR3BQ9Y2G0 817 aa6.33□□□□□ -1.4
PPP4R1-227ENST00000583988 MEIS3P2A8K0S8 358 aa6.32□□□□□ -1.4
PPP4R1-227ENST00000583988 GLI1P08151 1106 aa6.32□□□□□ -1.4
PPP4R1-227ENST00000583988 GBP1P32455 592 aa6.32□□□□□ -1.4
PPP4R1-227ENST00000583988 NAALADL2Q58DX5 795 aa6.32□□□□□ -1.4
PPP4R1-227ENST00000583988 INTS3Q68E01 1043 aaKnown RBP6.32□□□□□ -1.4
PPP4R1-227ENST00000583988 RBBP8NLQ8NC74 664 aaPredicted RBP6.32□□□□□ -1.4
PPP4R1-227ENST00000583988 ATG4CQ96DT6 458 aa6.32□□□□□ -1.4
PPP4R1-227ENST00000583988 SLC38A3Q99624 504 aa6.32□□□□□ -1.4
PPP4R1-227ENST00000583988 GPR62Q9BZJ7 368 aa6.32□□□□□ -1.4
PPP4R1-227ENST00000583988 CNNM2Q9H8M5 875 aa6.32□□□□□ -1.4
PPP4R1-227ENST00000583988 CAPN10Q9HC96 672 aa6.32□□□□□ -1.4
PPP4R1-227ENST00000583988 FAM53CQ9NYF3 392 aa6.32□□□□□ -1.4
PPP4R1-227ENST00000583988 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.31□□□□□ -1.4
PPP4R1-227ENST00000583988 RGS13O14921 159 aa6.31□□□□□ -1.4
PPP4R1-227ENST00000583988 RAC2P15153 192 aa6.31□□□□□ -1.4
PPP4R1-227ENST00000583988 ATF4P18848 351 aaPredicted RBP6.31□□□□□ -1.4
PPP4R1-227ENST00000583988 LTKP29376 864 aa6.31□□□□□ -1.4
PPP4R1-227ENST00000583988 ERVFC1P60507 584 aa6.31□□□□□ -1.4
PPP4R1-227ENST00000583988 EGR3Q06889 387 aa6.31□□□□□ -1.4
PPP4R1-227ENST00000583988 FZD5Q13467 585 aa6.31□□□□□ -1.4
PPP4R1-227ENST00000583988 GAB4Q2WGN9 574 aa6.31□□□□□ -1.4
PPP4R1-227ENST00000583988 ARSHQ5FYA8 562 aa6.31□□□□□ -1.4
PPP4R1-227ENST00000583988 TSPYL5Q86VY4 417 aaPredicted RBP6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms