RNA–Protein interactions for RNA: ENST00000581241.5

CSNK1D-217, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 6,094 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-217ENST00000581241 DESI2Q9BSY9 194 aa16.05■□□□□ 0.16
CSNK1D-217ENST00000581241 PLEKHA4Q9H4M7 779 aa16.05■□□□□ 0.16
CSNK1D-217ENST00000581241 HOMER3Q9NSC5 361 aa16.05■□□□□ 0.16
CSNK1D-217ENST00000581241 ZNF215Q9UL58 517 aaPredicted RBP16.05■□□□□ 0.16
CSNK1D-217ENST00000581241 UHRF1BP1LA0JNW5 1464 aa16.05■□□□□ 0.16
CSNK1D-217ENST00000581241 A2MP01023 1474 aa16.05■□□□□ 0.16
CSNK1D-217ENST00000581241 PSDA5PKW4 1024 aaPredicted RBP16.05■□□□□ 0.16
CSNK1D-217ENST00000581241 RFC1P35251 1148 aaPredicted RBP16.05■□□□□ 0.16
CSNK1D-217ENST00000581241 DCUN1D2Q6PH85 259 aa16.05■□□□□ 0.16
CSNK1D-217ENST00000581241 U2AF1L4Q8WU68 220 aaKnown RBP16.05■□□□□ 0.16
CSNK1D-217ENST00000581241 RGS12O14924 1447 aa16.05■□□□□ 0.16
CSNK1D-217ENST00000581241 KDM3AQ9Y4C1 1321 aa16.05■□□□□ 0.16
CSNK1D-217ENST00000581241 KCNK3O14649 394 aa16.05■□□□□ 0.16
CSNK1D-217ENST00000581241 HIP1RO75146 1068 aa16.05■□□□□ 0.16
CSNK1D-217ENST00000581241 GPIHBP1Q8IV16 184 aa16.05■□□□□ 0.16
CSNK1D-217ENST00000581241 USP19O94966 1318 aa16.05■□□□□ 0.16
CSNK1D-217ENST00000581241 ZNF274Q96GC6 653 aaPredicted RBP16.05■□□□□ 0.16
CSNK1D-217ENST00000581241 TRIM35Q9UPQ4 493 aa16.05■□□□□ 0.16
CSNK1D-217ENST00000581241 FAN1Q9Y2M0 1017 aa16.05■□□□□ 0.16
CSNK1D-217ENST00000581241 TTC36A6NLP5 189 aa16.05■□□□□ 0.16
CSNK1D-217ENST00000581241 ATP1A2P50993 1020 aa16.05■□□□□ 0.16
CSNK1D-217ENST00000581241 PDE1CQ14123 709 aaPredicted RBP16.05■□□□□ 0.16
CSNK1D-217ENST00000581241 TRIML1Q8N9V2 468 aa16.05■□□□□ 0.16
CSNK1D-217ENST00000581241 SUCLG2Q96I99 432 aa16.05■□□□□ 0.16
CSNK1D-217ENST00000581241 CERS3Q8IU89 383 aa16.04■□□□□ 0.16
CSNK1D-217ENST00000581241 EYA3Q99504 573 aa16.04■□□□□ 0.16
CSNK1D-217ENST00000581241 PNMA6EA0A0J9YXQ4 647 aa16.04■□□□□ 0.16
CSNK1D-217ENST00000581241 LIG3P49916 1009 aa16.04■□□□□ 0.16
CSNK1D-217ENST00000581241 MICAL1Q8TDZ2 1067 aa16.04■□□□□ 0.16
CSNK1D-217ENST00000581241 ATP2A3Q93084 1043 aa16.04■□□□□ 0.16
CSNK1D-217ENST00000581241 JAG2Q9Y219 1238 aa16.04■□□□□ 0.16
CSNK1D-217ENST00000581241 EXOC3O60645 756 aa16.04■□□□□ 0.16
CSNK1D-217ENST00000581241 CEBPAP49715 358 aaPredicted RBP16.04■□□□□ 0.16
CSNK1D-217ENST00000581241 SATB1Q01826 763 aa16.04■□□□□ 0.16
CSNK1D-217ENST00000581241 PPP4R1Q8TF05 950 aa16.04■□□□□ 0.16
CSNK1D-217ENST00000581241 KRT12Q99456 494 aa16.04■□□□□ 0.16
CSNK1D-217ENST00000581241 Q9H521 79 aa16.04■□□□□ 0.16
CSNK1D-217ENST00000581241 RIMBP2O15034 1052 aa16.04■□□□□ 0.16
CSNK1D-217ENST00000581241 IL13P35225 146 aa16.04■□□□□ 0.16
CSNK1D-217ENST00000581241 RBM6P78332 1123 aaKnown RBP16.04■□□□□ 0.16
CSNK1D-217ENST00000581241 MYSM1Q5VVJ2 828 aa16.04■□□□□ 0.16
CSNK1D-217ENST00000581241 CADPS2Q86UW7 1296 aa16.04■□□□□ 0.16
CSNK1D-217ENST00000581241 PALM2Q8IXS6 379 aa16.04■□□□□ 0.16
CSNK1D-217ENST00000581241 ZC3H12CQ9C0D7 883 aaKnown RBP16.04■□□□□ 0.16
CSNK1D-217ENST00000581241 GIPC1O14908 333 aa16.03■□□□□ 0.16
CSNK1D-217ENST00000581241 LRMPQ12912 555 aa16.03■□□□□ 0.16
CSNK1D-217ENST00000581241 BCAS4Q8TDM0 211 aa16.03■□□□□ 0.16
CSNK1D-217ENST00000581241 PDE11AQ9HCR9 933 aa16.03■□□□□ 0.16
CSNK1D-217ENST00000581241 KDM5AP29375 1690 aaKnown RBP16.03■□□□□ 0.16
CSNK1D-217ENST00000581241 OPHN1O60890 802 aa16.03■□□□□ 0.16
CSNK1D-217ENST00000581241 ARHGEF10LQ9HCE6 1279 aa16.03■□□□□ 0.16
CSNK1D-217ENST00000581241 MAST1Q9Y2H9 1570 aa16.03■□□□□ 0.16
CSNK1D-217ENST00000581241 PDE8AO60658 829 aa16.03■□□□□ 0.16
CSNK1D-217ENST00000581241 ZMYM6O95789 1325 aa16.03■□□□□ 0.16
CSNK1D-217ENST00000581241 SHANK2Q9UPX8 1470 aa16.03■□□□□ 0.16
CSNK1D-217ENST00000581241 HIBADHP31937 336 aaKnown RBP16.03■□□□□ 0.16
CSNK1D-217ENST00000581241 TCP1P17987 556 aaKnown RBP16.02■□□□□ 0.16
CSNK1D-217ENST00000581241 DNM2P50570 870 aa16.02■□□□□ 0.16
CSNK1D-217ENST00000581241 CASC4Q6P4E1 433 aa16.02■□□□□ 0.16
CSNK1D-217ENST00000581241 PAXIP1Q6ZW49 1069 aaPredicted RBP16.02■□□□□ 0.16
CSNK1D-217ENST00000581241 CCDC117Q8IWD4 279 aaPredicted RBP16.02■□□□□ 0.16
CSNK1D-217ENST00000581241 NT5C3AQ9H0P0 336 aa16.02■□□□□ 0.16
CSNK1D-217ENST00000581241 BUB1O43683 1085 aa16.02■□□□□ 0.16
CSNK1D-217ENST00000581241 ETF1P62495 437 aaKnown RBP16.02■□□□□ 0.16
CSNK1D-217ENST00000581241 RSAD2Q8WXG1 361 aa16.02■□□□□ 0.16
CSNK1D-217ENST00000581241 NLRC4Q9NPP4 1024 aa16.02■□□□□ 0.16
CSNK1D-217ENST00000581241 TYW1Q9NV66 732 aaKnown RBP16.02■□□□□ 0.16
CSNK1D-217ENST00000581241 RAB20Q9NX57 234 aa16.02■□□□□ 0.16
CSNK1D-217ENST00000581241 PLXNC1O60486 1568 aa16.02■□□□□ 0.16
CSNK1D-217ENST00000581241 PER1O15534 1290 aaPredicted RBP16.02■□□□□ 0.16
CSNK1D-217ENST00000581241 PFKFB2O60825 505 aa16.02■□□□□ 0.16
CSNK1D-217ENST00000581241 GSPT1P15170 499 aaKnown RBP16.02■□□□□ 0.16
CSNK1D-217ENST00000581241 KLHDC4Q8TBB5 520 aa16.02■□□□□ 0.16
CSNK1D-217ENST00000581241 HVCN1Q96D96 273 aa16.02■□□□□ 0.16
CSNK1D-217ENST00000581241 HAUS4Q9H6D7 363 aa16.02■□□□□ 0.16
CSNK1D-217ENST00000581241 VCX3AQ9NNX9 186 aa16.02■□□□□ 0.16
CSNK1D-217ENST00000581241 PYCARDQ9ULZ3 195 aa16.02■□□□□ 0.16
CSNK1D-217ENST00000581241 ARHGAP42A6NI28 874 aa16.02■□□□□ 0.15
CSNK1D-217ENST00000581241 CMA1P23946 247 aa16.02■□□□□ 0.15
CSNK1D-217ENST00000581241 ARHGAP44Q17R89 818 aa16.02■□□□□ 0.15
CSNK1D-217ENST00000581241 RNF168Q8IYW5 571 aaPredicted RBP16.02■□□□□ 0.15
CSNK1D-217ENST00000581241 PROCA1Q8NCQ7 364 aaPredicted RBP16.02■□□□□ 0.15
CSNK1D-217ENST00000581241 IP6K1Q92551 441 aa16.02■□□□□ 0.15
CSNK1D-217ENST00000581241 VTI1AQ96AJ9 217 aa16.02■□□□□ 0.15
CSNK1D-217ENST00000581241 HAUS7Q99871 368 aa16.02■□□□□ 0.15
CSNK1D-217ENST00000581241 VPS54Q9P1Q0 977 aa16.02■□□□□ 0.15
CSNK1D-217ENST00000581241 FAM135BQ49AJ0 1406 aa16.02■□□□□ 0.15
CSNK1D-217ENST00000581241 TRIM37O94972 964 aa16.02■□□□□ 0.15
CSNK1D-217ENST00000581241 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.02■□□□□ 0.15
CSNK1D-217ENST00000581241 SPATA5Q8NB90 893 aa16.01■□□□□ 0.15
CSNK1D-217ENST00000581241 RABGGTAQ92696 567 aa16.01■□□□□ 0.15
CSNK1D-217ENST00000581241 MTMR6Q9Y217 621 aa16.01■□□□□ 0.15
CSNK1D-217ENST00000581241 EDC4Q6P2E9 1401 aaKnown RBP16.01■□□□□ 0.15
CSNK1D-217ENST00000581241 RAD51AP2Q09MP3 1159 aa16.01■□□□□ 0.15
CSNK1D-217ENST00000581241 RUNDC3BQ96NL0 473 aa16.01■□□□□ 0.15
CSNK1D-217ENST00000581241 ZNF532Q9HCE3 1301 aa16.01■□□□□ 0.15
CSNK1D-217ENST00000581241 STAMQ92783 540 aa16.01■□□□□ 0.15
CSNK1D-217ENST00000581241 ZNF594Q96JF6 807 aaPredicted RBP16.01■□□□□ 0.15
CSNK1D-217ENST00000581241 ZSWIM6Q9HCJ5 1215 aa16.01■□□□□ 0.15
CSNK1D-217ENST00000581241 NSFL1CQ9UNZ2 370 aaKnown RBP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms