RNA–Protein interactions for RNA: ENST00000576335.5

TRAP1-216, Transcript of TNF receptor associated protein 1, humanhuman

TSL 5

Gene TRAP1, Length 645 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAP1-216ENST00000576335 KIAA1683Q9H0B3 1180 aa13.12□□□□□ -0.31
TRAP1-216ENST00000576335 TLL2Q9Y6L7 1015 aa13.12□□□□□ -0.31
TRAP1-216ENST00000576335 OTOFQ9HC10 1997 aa13.11□□□□□ -0.31
TRAP1-216ENST00000576335 KLF18A0A0U1RQI7 1052 aa13.11□□□□□ -0.31
TRAP1-216ENST00000576335 UBE2Q2LH0YL09 131 aa13.11□□□□□ -0.31
TRAP1-216ENST00000576335 ZBTB43O43298 467 aa13.11□□□□□ -0.31
TRAP1-216ENST00000576335 KIF5BP33176 963 aa13.11□□□□□ -0.31
TRAP1-216ENST00000576335 HUNKP57058 714 aa13.11□□□□□ -0.31
TRAP1-216ENST00000576335 ATP2B2Q01814 1243 aa13.11□□□□□ -0.31
TRAP1-216ENST00000576335 GRM1Q13255 1194 aa13.11□□□□□ -0.31
TRAP1-216ENST00000576335 DEFB115Q30KQ5 88 aa13.11□□□□□ -0.31
TRAP1-216ENST00000576335 APOA5Q6Q788 366 aa13.11□□□□□ -0.31
TRAP1-216ENST00000576335 SAPCD2Q86UD0 394 aa13.11□□□□□ -0.31
TRAP1-216ENST00000576335 ZNF654Q8IZM8 581 aa13.11□□□□□ -0.31
TRAP1-216ENST00000576335 CTCFLQ8NI51 663 aaPredicted RBP13.11□□□□□ -0.31
TRAP1-216ENST00000576335 DCAF4Q8WV16 495 aa13.11□□□□□ -0.31
TRAP1-216ENST00000576335 TCEANC2Q96MN5 208 aa13.11□□□□□ -0.31
TRAP1-216ENST00000576335 LRRC2Q9BYS8 371 aa13.11□□□□□ -0.31
TRAP1-216ENST00000576335 RBM28Q9NW13 759 aaKnown RBP13.11□□□□□ -0.31
TRAP1-216ENST00000576335 ZHX2Q9Y6X8 837 aa13.11□□□□□ -0.31
TRAP1-216ENST00000576335 GNAQP50148 359 aa13.1□□□□□ -0.31
TRAP1-216ENST00000576335 BACE1P56817 501 aa13.1□□□□□ -0.31
TRAP1-216ENST00000576335 JAG1P78504 1218 aa13.1□□□□□ -0.31
TRAP1-216ENST00000576335 ASPRV1Q53RT3 343 aa13.1□□□□□ -0.31
TRAP1-216ENST00000576335 GPATCH4Q5T3I0 446 aaKnown RBP13.1□□□□□ -0.31
TRAP1-216ENST00000576335 CPLX2Q6PUV4 134 aaKnown RBP13.1□□□□□ -0.31
TRAP1-216ENST00000576335 USP17L2Q6R6M4 530 aa13.1□□□□□ -0.31
TRAP1-216ENST00000576335 NKX2-3Q8TAU0 364 aa13.1□□□□□ -0.31
TRAP1-216ENST00000576335 GMCL1Q96IK5 515 aa13.1□□□□□ -0.31
TRAP1-216ENST00000576335 C12orf42Q96LP6 360 aa13.1□□□□□ -0.31
TRAP1-216ENST00000576335 VCPKMTQ9H867 229 aa13.1□□□□□ -0.31
TRAP1-216ENST00000576335 ELP3Q9H9T3 547 aa13.1□□□□□ -0.31
TRAP1-216ENST00000576335 FOXD4L1Q9NU39 408 aa13.1□□□□□ -0.31
TRAP1-216ENST00000576335 TMOD4Q9NZQ9 345 aa13.1□□□□□ -0.31
TRAP1-216ENST00000576335 FZD1Q9UP38 647 aa13.1□□□□□ -0.31
TRAP1-216ENST00000576335 KCNH4Q9UQ05 1017 aa13.1□□□□□ -0.31
TRAP1-216ENST00000576335 AFG3L2Q9Y4W6 797 aa13.1□□□□□ -0.31
TRAP1-216ENST00000576335 GOLGA8BA8MQT2 603 aa13.09□□□□□ -0.31
TRAP1-216ENST00000576335 K7ELQ4 463 aaPredicted RBP13.09□□□□□ -0.31
TRAP1-216ENST00000576335 SNHG28P0DPA3 235 aa13.09□□□□□ -0.31
TRAP1-216ENST00000576335 ECE1P42892 770 aa13.09□□□□□ -0.31
TRAP1-216ENST00000576335 METAP2P50579 478 aaKnown RBP eCLIP13.09□□□□□ -0.317e-7■□□□□ 8.2
TRAP1-216ENST00000576335 APOBRQ0VD83 1088 aa13.09□□□□□ -0.31
TRAP1-216ENST00000576335 TROAPQ12815 778 aa13.09□□□□□ -0.31
TRAP1-216ENST00000576335 SPP2Q13103 211 aa13.09□□□□□ -0.31
TRAP1-216ENST00000576335 SH3D19Q5HYK7 790 aa13.09□□□□□ -0.31
TRAP1-216ENST00000576335 RGMBQ6NW40 437 aa13.09□□□□□ -0.31
TRAP1-216ENST00000576335 MOB2Q70IA6 237 aa13.09□□□□□ -0.31
TRAP1-216ENST00000576335 FASTKD5Q7L8L6 764 aaKnown RBP13.09□□□□□ -0.31
TRAP1-216ENST00000576335 SIAH1Q8IUQ4 282 aa13.09□□□□□ -0.31
TRAP1-216ENST00000576335 LRRC47Q8N1G4 583 aaKnown RBP13.09□□□□□ -0.31
TRAP1-216ENST00000576335 PROCA1Q8NCQ7 364 aaPredicted RBP13.09□□□□□ -0.31
TRAP1-216ENST00000576335 CCDC102AQ96A19 550 aa13.09□□□□□ -0.31
TRAP1-216ENST00000576335 OPTNQ96CV9 577 aa13.09□□□□□ -0.31
TRAP1-216ENST00000576335 OTUD5Q96G74 571 aa13.09□□□□□ -0.31
TRAP1-216ENST00000576335 LZTS2Q9BRK4 669 aa13.09□□□□□ -0.31
TRAP1-216ENST00000576335 SLKQ9H2G2 1235 aaPredicted RBP13.09□□□□□ -0.31
TRAP1-216ENST00000576335 GOLGA8AA7E2F4 631 aa13.08□□□□□ -0.32
TRAP1-216ENST00000576335 F5H6K3 240 aa13.08□□□□□ -0.32
TRAP1-216ENST00000576335 WDR46O15213 610 aaKnown RBP13.08□□□□□ -0.32
TRAP1-216ENST00000576335 PFKFB2O60825 505 aa13.08□□□□□ -0.32
TRAP1-216ENST00000576335 CDKL5O76039 1030 aa13.08□□□□□ -0.32
TRAP1-216ENST00000576335 PARP1P09874 1014 aaKnown RBP13.08□□□□□ -0.32
TRAP1-216ENST00000576335 PDHBP11177 359 aa13.08□□□□□ -0.32
TRAP1-216ENST00000576335 SMARCA1P28370 1054 aa13.08□□□□□ -0.32
TRAP1-216ENST00000576335 PDIA3P30101 505 aaKnown RBP13.08□□□□□ -0.32
TRAP1-216ENST00000576335 SLC1A4P43007 532 aa13.08□□□□□ -0.32
TRAP1-216ENST00000576335 GTF2A2P52657 109 aa13.08□□□□□ -0.32
TRAP1-216ENST00000576335 KLRC3Q07444 240 aa13.08□□□□□ -0.32
TRAP1-216ENST00000576335 PABPC4Q13310 644 aaKnown RBP eCLIP13.08□□□□□ -0.32
TRAP1-216ENST00000576335 SNAPC2Q13487 334 aa13.08□□□□□ -0.32
TRAP1-216ENST00000576335 MTMR2Q13614 643 aa13.08□□□□□ -0.32
TRAP1-216ENST00000576335 COL9A3Q14050 684 aaPredicted RBP13.08□□□□□ -0.32
TRAP1-216ENST00000576335 SHROOM1Q2M3G4 852 aaPredicted RBP13.08□□□□□ -0.32
TRAP1-216ENST00000576335 SLFN13Q68D06 897 aa13.08□□□□□ -0.32
TRAP1-216ENST00000576335 MICU3Q86XE3 530 aa13.08□□□□□ -0.32
TRAP1-216ENST00000576335 WNK4Q96J92 1243 aa13.08□□□□□ -0.32
TRAP1-216ENST00000576335 CLMNQ96JQ2 1002 aa13.08□□□□□ -0.32
TRAP1-216ENST00000576335 TSHZ2Q9NRE2 1034 aa13.08□□□□□ -0.32
TRAP1-216ENST00000576335 TPCN1Q9ULQ1 816 aa13.08□□□□□ -0.32
TRAP1-216ENST00000576335 NAP1L2Q9ULW6 460 aaPredicted RBP13.08□□□□□ -0.32
TRAP1-216ENST00000576335 A0A0G2JLL6 359 aaPredicted RBP13.07□□□□□ -0.32
TRAP1-216ENST00000576335 A0A1W2PRG0 241 aa13.07□□□□□ -0.32
TRAP1-216ENST00000576335 TRIM75PA6NK02 468 aa13.07□□□□□ -0.32
TRAP1-216ENST00000576335 RASSF10A6NK89 507 aa13.07□□□□□ -0.32
TRAP1-216ENST00000576335 NDUFB10O96000 172 aa13.07□□□□□ -0.32
TRAP1-216ENST00000576335 CETPP11597 493 aa13.07□□□□□ -0.32
TRAP1-216ENST00000576335 ZNF157P51786 506 aaPredicted RBP13.07□□□□□ -0.32
TRAP1-216ENST00000576335 GRM4Q14833 912 aa13.07□□□□□ -0.32
TRAP1-216ENST00000576335 RTN1Q16799 776 aa13.07□□□□□ -0.32
TRAP1-216ENST00000576335 PRRT2Q7Z6L0 340 aaPredicted RBP13.07□□□□□ -0.32
TRAP1-216ENST00000576335 CLEC10AQ8IUN9 316 aa13.07□□□□□ -0.32
TRAP1-216ENST00000576335 FANCBQ8NB91 859 aa13.07□□□□□ -0.32
TRAP1-216ENST00000576335 ACER1Q8TDN7 264 aa13.07□□□□□ -0.32
TRAP1-216ENST00000576335 NUP133Q8WUM0 1156 aa13.07□□□□□ -0.32
TRAP1-216ENST00000576335 GPHNQ9NQX3 736 aaPredicted RBP13.07□□□□□ -0.32
TRAP1-216ENST00000576335 RBM27Q9P2N5 1060 aaKnown RBP13.07□□□□□ -0.32
TRAP1-216ENST00000576335 BRPF3Q9ULD4 1205 aa13.07□□□□□ -0.32
TRAP1-216ENST00000576335 CPLX1O14810 134 aa13.06□□□□□ -0.32
TRAP1-216ENST00000576335 IRF6O14896 467 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms