RNA–Protein interactions for RNA: ENST00000570756.5

SMG6-207, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 2,426 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-207ENST00000570756 TEX2Q8IWB9 1127 aa17.36■□□□□ 0.37
SMG6-207ENST00000570756 SELENOOQ9BVL4 669 aa17.36■□□□□ 0.37
SMG6-207ENST00000570756 FAM169AQ9Y6X4 670 aa17.36■□□□□ 0.37
SMG6-207ENST00000570756 NID2Q14112 1375 aa17.36■□□□□ 0.37
SMG6-207ENST00000570756 IRAK1P51617 712 aa17.36■□□□□ 0.37
SMG6-207ENST00000570756 DPYDQ12882 1025 aa17.36■□□□□ 0.37
SMG6-207ENST00000570756 SF3B2Q13435 895 aaKnown RBP17.36■□□□□ 0.37
SMG6-207ENST00000570756 SCARF1Q14162 830 aa17.36■□□□□ 0.37
SMG6-207ENST00000570756 SART3Q15020 963 aaKnown RBP17.36■□□□□ 0.37
SMG6-207ENST00000570756 USP49Q70CQ1 688 aa17.36■□□□□ 0.37
SMG6-207ENST00000570756 MMS19Q96T76 1030 aa17.36■□□□□ 0.37
SMG6-207ENST00000570756 KAT14Q9H8E8 782 aa17.36■□□□□ 0.37
SMG6-207ENST00000570756 CTNND2Q9UQB3 1225 aa17.36■□□□□ 0.37
SMG6-207ENST00000570756 UBE2Q2LH0YL09 131 aa17.35■□□□□ 0.37
SMG6-207ENST00000570756 IFIT3O14879 490 aaKnown RBP17.35■□□□□ 0.37
SMG6-207ENST00000570756 DEXIO95424 95 aa17.35■□□□□ 0.37
SMG6-207ENST00000570756 ADD2P35612 726 aa17.35■□□□□ 0.37
SMG6-207ENST00000570756 COPB1P53618 953 aaKnown RBP17.35■□□□□ 0.37
SMG6-207ENST00000570756 RIN2Q8WYP3 895 aaPredicted RBP17.35■□□□□ 0.37
SMG6-207ENST00000570756 A6NNZ2 444 aa17.35■□□□□ 0.37
SMG6-207ENST00000570756 SKIDA1Q1XH10 827 aa17.35■□□□□ 0.37
SMG6-207ENST00000570756 TSR1Q2NL82 804 aaKnown RBP17.35■□□□□ 0.37
SMG6-207ENST00000570756 TUBB8Q3ZCM7 444 aa17.35■□□□□ 0.37
SMG6-207ENST00000570756 CAPS2Q9BXY5 557 aa17.35■□□□□ 0.37
SMG6-207ENST00000570756 TJP1Q07157 1748 aa17.34■□□□□ 0.37
SMG6-207ENST00000570756 ENC1O14682 589 aa17.34■□□□□ 0.37
SMG6-207ENST00000570756 GUCY1A2P33402 732 aa17.34■□□□□ 0.37
SMG6-207ENST00000570756 LIG3P49916 1009 aa17.34■□□□□ 0.37
SMG6-207ENST00000570756 TTF1Q15361 905 aaPredicted RBP17.34■□□□□ 0.37
SMG6-207ENST00000570756 E2F4Q16254 413 aa17.34■□□□□ 0.37
SMG6-207ENST00000570756 CCNI2Q6ZMN8 369 aaPredicted RBP17.34■□□□□ 0.37
SMG6-207ENST00000570756 IFNL2Q8IZJ0 200 aa17.34■□□□□ 0.37
SMG6-207ENST00000570756 CAGE1Q8TC20 777 aa17.34■□□□□ 0.37
SMG6-207ENST00000570756 PHLPP1O60346 1717 aa17.34■□□□□ 0.37
SMG6-207ENST00000570756 CCDC196A0A1B0GTZ2 297 aa17.33■□□□□ 0.37
SMG6-207ENST00000570756 TRIM75PA6NK02 468 aa17.33■□□□□ 0.37
SMG6-207ENST00000570756 BMP15O95972 392 aa17.33■□□□□ 0.37
SMG6-207ENST00000570756 ATP1A1P05023 1023 aaKnown RBP17.33■□□□□ 0.37
SMG6-207ENST00000570756 TATP17735 454 aaPredicted RBP17.33■□□□□ 0.37
SMG6-207ENST00000570756 KRT83P78385 493 aa17.33■□□□□ 0.37
SMG6-207ENST00000570756 NR5A1Q13285 461 aa17.33■□□□□ 0.37
SMG6-207ENST00000570756 RTN1Q16799 776 aa17.33■□□□□ 0.37
SMG6-207ENST00000570756 CCDC122Q5T0U0 273 aa17.33■□□□□ 0.37
SMG6-207ENST00000570756 ZNF662Q6ZS27 426 aa17.33■□□□□ 0.37
SMG6-207ENST00000570756 SMYD4Q8IYR2 804 aaPredicted RBP17.33■□□□□ 0.37
SMG6-207ENST00000570756 VPS16Q9H269 839 aa17.33■□□□□ 0.37
SMG6-207ENST00000570756 HDAC6Q9UBN7 1215 aa17.33■□□□□ 0.37
SMG6-207ENST00000570756 RWDD2AQ9UIY3 292 aa17.33■□□□□ 0.37
SMG6-207ENST00000570756 FAM184BQ9ULE4 1060 aa17.33■□□□□ 0.37
SMG6-207ENST00000570756 BCL9LQ86UU0 1499 aa17.33■□□□□ 0.37
SMG6-207ENST00000570756 GOLGA8KD6RF30 607 aa17.33■□□□□ 0.36
SMG6-207ENST00000570756 AGPSO00116 658 aa17.33■□□□□ 0.36
SMG6-207ENST00000570756 GPATCH11Q8N954 259 aa17.33■□□□□ 0.36
SMG6-207ENST00000570756 OR8K1Q8NGG5 319 aa17.33■□□□□ 0.36
SMG6-207ENST00000570756 NKX2-3Q8TAU0 364 aa17.33■□□□□ 0.36
SMG6-207ENST00000570756 BCAS4Q8TDM0 211 aa17.33■□□□□ 0.36
SMG6-207ENST00000570756 RUBCNQ92622 972 aa17.33■□□□□ 0.36
SMG6-207ENST00000570756 JAKMIP2Q96AA8 810 aa17.33■□□□□ 0.36
SMG6-207ENST00000570756 FERMT2Q96AC1 680 aa17.33■□□□□ 0.36
SMG6-207ENST00000570756 CNNM2Q9H8M5 875 aa17.33■□□□□ 0.36
SMG6-207ENST00000570756 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.33■□□□□ 0.36
SMG6-207ENST00000570756 IQSEC3Q9UPP2 1182 aaPredicted RBP17.33■□□□□ 0.36
SMG6-207ENST00000570756 AXIN2Q9Y2T1 843 aa17.33■□□□□ 0.36
SMG6-207ENST00000570756 REXO2Q9Y3B8 237 aaKnown RBP17.33■□□□□ 0.36
SMG6-207ENST00000570756 EIF3HO15372 352 aaKnown RBP eCLIP17.32■□□□□ 0.36
SMG6-207ENST00000570756 KRT86O43790 486 aa17.32■□□□□ 0.36
SMG6-207ENST00000570756 INPP5BP32019 993 aa17.32■□□□□ 0.36
SMG6-207ENST00000570756 MNAT1P51948 309 aa17.32■□□□□ 0.36
SMG6-207ENST00000570756 UBE3CQ15386 1083 aa17.32■□□□□ 0.36
SMG6-207ENST00000570756 TCP11X2Q5H9J9 407 aa17.32■□□□□ 0.36
SMG6-207ENST00000570756 DCAF5Q96JK2 942 aa17.32■□□□□ 0.36
SMG6-207ENST00000570756 CABP5Q9NP86 173 aa17.32■□□□□ 0.36
SMG6-207ENST00000570756 A0A087X0B3 334 aa17.32■□□□□ 0.36
SMG6-207ENST00000570756 ANO9A1A5B4 782 aa17.32■□□□□ 0.36
SMG6-207ENST00000570756 KCNJ18B7U540 433 aa17.32■□□□□ 0.36
SMG6-207ENST00000570756 CDC25AP30304 524 aa17.32■□□□□ 0.36
SMG6-207ENST00000570756 GSCP56915 257 aaPredicted RBP17.32■□□□□ 0.36
SMG6-207ENST00000570756 SETQ01105 290 aaPredicted RBP17.32■□□□□ 0.36
SMG6-207ENST00000570756 PAK1Q13153 545 aa17.32■□□□□ 0.36
SMG6-207ENST00000570756 KCNJ12Q14500 433 aa17.32■□□□□ 0.36
SMG6-207ENST00000570756 AMOTL1Q8IY63 956 aa17.32■□□□□ 0.36
SMG6-207ENST00000570756 SYMPKQ92797 1274 aaKnown RBP17.32■□□□□ 0.36
SMG6-207ENST00000570756 EPSTI1Q96J88 318 aa17.32■□□□□ 0.36
SMG6-207ENST00000570756 CAPZA3Q96KX2 299 aa17.32■□□□□ 0.36
SMG6-207ENST00000570756 CHP1Q99653 195 aa17.32■□□□□ 0.36
SMG6-207ENST00000570756 TAB2Q9NYJ8 693 aa17.32■□□□□ 0.36
SMG6-207ENST00000570756 TRIM10Q9UDY6 481 aa17.32■□□□□ 0.36
SMG6-207ENST00000570756 RNF225M0QZC1 329 aaPredicted RBP17.31■□□□□ 0.36
SMG6-207ENST00000570756 OPA1O60313 960 aa17.31■□□□□ 0.36
SMG6-207ENST00000570756 CHRNA2Q15822 529 aa17.31■□□□□ 0.36
SMG6-207ENST00000570756 PI16Q6UXB8 463 aa17.31■□□□□ 0.36
SMG6-207ENST00000570756 KAT2BQ92831 832 aa17.31■□□□□ 0.36
SMG6-207ENST00000570756 GDAP1L1Q96MZ0 367 aa17.31■□□□□ 0.36
SMG6-207ENST00000570756 KRT23Q9C075 422 aa17.31■□□□□ 0.36
SMG6-207ENST00000570756 ATXN2Q99700 1313 aaKnown RBP17.31■□□□□ 0.36
SMG6-207ENST00000570756 NUP188Q5SRE5 1749 aa17.31■□□□□ 0.36
SMG6-207ENST00000570756 HNRNPH1P31943 449 aaKnown RBP17.31■□□□□ 0.36
SMG6-207ENST00000570756 UBXN1Q04323 297 aa17.31■□□□□ 0.36
SMG6-207ENST00000570756 ALX1Q15699 326 aa17.31■□□□□ 0.36
SMG6-207ENST00000570756 RRAGBQ5VZM2 374 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms