RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 IL17RAQ96F46 866 aa7.73□□□□□ -1.17
CTDNEP1-204ENST00000570484 CDCA5Q96FF9 252 aa7.73□□□□□ -1.17
CTDNEP1-204ENST00000570484 TMEM87BQ96K49 555 aa7.73□□□□□ -1.17
CTDNEP1-204ENST00000570484 WRNIP1Q96S55 665 aa7.73□□□□□ -1.17
CTDNEP1-204ENST00000570484 GLIS2Q9BZE0 524 aaPredicted RBP7.73□□□□□ -1.17
CTDNEP1-204ENST00000570484 ZNF408Q9H9D4 720 aa7.73□□□□□ -1.17
CTDNEP1-204ENST00000570484 TNKSO95271 1327 aa7.73□□□□□ -1.17
CTDNEP1-204ENST00000570484 FOCADQ5VW36 1801 aa7.73□□□□□ -1.17
CTDNEP1-204ENST00000570484 ECM29Q5VYK3 1845 aa7.73□□□□□ -1.17
CTDNEP1-204ENST00000570484 GOLGA8BA8MQT2 603 aa7.72□□□□□ -1.17
CTDNEP1-204ENST00000570484 POTECB2RU33 542 aa7.72□□□□□ -1.17
CTDNEP1-204ENST00000570484 PPP1R3GB7ZBB8 358 aa7.72□□□□□ -1.17
CTDNEP1-204ENST00000570484 IRF6O14896 467 aa7.72□□□□□ -1.17
CTDNEP1-204ENST00000570484 GDF11O95390 407 aa7.72□□□□□ -1.17
CTDNEP1-204ENST00000570484 CPA1P15085 419 aa7.72□□□□□ -1.17
CTDNEP1-204ENST00000570484 COL9A1P20849 921 aa7.72□□□□□ -1.17
CTDNEP1-204ENST00000570484 PTPREP23469 700 aa7.72□□□□□ -1.17
CTDNEP1-204ENST00000570484 ATP2B2Q01814 1243 aa7.72□□□□□ -1.17
CTDNEP1-204ENST00000570484 ICA1Q05084 483 aa7.72□□□□□ -1.17
CTDNEP1-204ENST00000570484 PRKG1Q13976 671 aa7.72□□□□□ -1.17
CTDNEP1-204ENST00000570484 RAB3GAP1Q15042 981 aa7.72□□□□□ -1.17
CTDNEP1-204ENST00000570484 VARS2Q5ST30 1063 aaKnown RBP7.72□□□□□ -1.17
CTDNEP1-204ENST00000570484 IFIT1BQ5T764 474 aaKnown RBP7.72□□□□□ -1.17
CTDNEP1-204ENST00000570484 NBPF12Q5TAG4 269 aaPredicted RBP7.72□□□□□ -1.17
CTDNEP1-204ENST00000570484 MAP1SQ66K74 1059 aaPredicted RBP7.72□□□□□ -1.17
CTDNEP1-204ENST00000570484 Q6ZUG5 572 aa7.72□□□□□ -1.17
CTDNEP1-204ENST00000570484 TMEM179Q6ZVK1 233 aa7.72□□□□□ -1.17
CTDNEP1-204ENST00000570484 CHST3Q7LGC8 479 aa7.72□□□□□ -1.17
CTDNEP1-204ENST00000570484 ARMC9Q7Z3E5 817 aa7.72□□□□□ -1.17
CTDNEP1-204ENST00000570484 CDAN1Q8IWY9 1227 aa7.72□□□□□ -1.17
CTDNEP1-204ENST00000570484 BRF1Q92994 677 aa7.72□□□□□ -1.17
CTDNEP1-204ENST00000570484 TCEANC2Q96MN5 208 aa7.72□□□□□ -1.17
CTDNEP1-204ENST00000570484 TEPSINQ96N21 525 aa7.72□□□□□ -1.17
CTDNEP1-204ENST00000570484 ZSCAN10Q96SZ4 725 aaPredicted RBP7.72□□□□□ -1.17
CTDNEP1-204ENST00000570484 ZKSCAN3Q9BRR0 538 aa7.72□□□□□ -1.17
CTDNEP1-204ENST00000570484 MTA3Q9BTC8 594 aa7.72□□□□□ -1.17
CTDNEP1-204ENST00000570484 SH2D4AQ9H788 454 aa7.72□□□□□ -1.17
CTDNEP1-204ENST00000570484 DNAJC18Q9H819 358 aa7.72□□□□□ -1.17
CTDNEP1-204ENST00000570484 KAT14Q9H8E8 782 aa7.72□□□□□ -1.17
CTDNEP1-204ENST00000570484 SLC24A3Q9HC58 644 aa7.72□□□□□ -1.17
CTDNEP1-204ENST00000570484 PICK1Q9NRD5 415 aa7.72□□□□□ -1.17
CTDNEP1-204ENST00000570484 ISY1Q9ULR0 285 aaKnown RBP7.72□□□□□ -1.17
CTDNEP1-204ENST00000570484 STX8Q9UNK0 236 aa7.72□□□□□ -1.17
CTDNEP1-204ENST00000570484 ANGEL1Q9UNK9 670 aaKnown RBP7.72□□□□□ -1.17
CTDNEP1-204ENST00000570484 CSADQ9Y600 493 aa7.72□□□□□ -1.17
CTDNEP1-204ENST00000570484 SSC5DA1L4H1 1573 aa7.71□□□□□ -1.17
CTDNEP1-204ENST00000570484 SMIM22K7EJ46 135 aa7.71□□□□□ -1.18
CTDNEP1-204ENST00000570484 SH2B2O14492 632 aaPredicted RBP7.71□□□□□ -1.18
CTDNEP1-204ENST00000570484 RAD21O60216 631 aa7.71□□□□□ -1.18
CTDNEP1-204ENST00000570484 GH2P01242 217 aa7.71□□□□□ -1.18
CTDNEP1-204ENST00000570484 ASNSP08243 561 aa7.71□□□□□ -1.18
CTDNEP1-204ENST00000570484 FGRP09769 529 aa7.71□□□□□ -1.18
CTDNEP1-204ENST00000570484 AKR1B1P15121 316 aa7.71□□□□□ -1.18
CTDNEP1-204ENST00000570484 AK2P54819 239 aa7.71□□□□□ -1.18
CTDNEP1-204ENST00000570484 PRSS12P56730 875 aa7.71□□□□□ -1.18
CTDNEP1-204ENST00000570484 PRAMEF18Q5VWM3 479 aa7.71□□□□□ -1.18
CTDNEP1-204ENST00000570484 TATDN1Q6P1N9 297 aa7.71□□□□□ -1.18
CTDNEP1-204ENST00000570484 CYB5R4Q7L1T6 521 aa7.71□□□□□ -1.18
CTDNEP1-204ENST00000570484 METTL16Q86W50 562 aaKnown RBP7.71□□□□□ -1.18
CTDNEP1-204ENST00000570484 TMTC2Q8N394 836 aa7.71□□□□□ -1.18
CTDNEP1-204ENST00000570484 SMC1BQ8NDV3 1235 aa7.71□□□□□ -1.18
CTDNEP1-204ENST00000570484 NEDD1Q8NHV4 660 aa7.71□□□□□ -1.18
CTDNEP1-204ENST00000570484 KIF2CQ99661 725 aa7.71□□□□□ -1.18
CTDNEP1-204ENST00000570484 FEZ1Q99689 392 aa7.71□□□□□ -1.18
CTDNEP1-204ENST00000570484 SLC4A5Q9BY07 1137 aa7.71□□□□□ -1.18
CTDNEP1-204ENST00000570484 LRRC2Q9BYS8 371 aa7.71□□□□□ -1.18
CTDNEP1-204ENST00000570484 ARHGEF10LQ9HCE6 1279 aa7.71□□□□□ -1.18
CTDNEP1-204ENST00000570484 INCENPQ9NQS7 918 aa7.71□□□□□ -1.18
CTDNEP1-204ENST00000570484 GINM1Q9NU53 330 aa7.71□□□□□ -1.18
CTDNEP1-204ENST00000570484 ZSWIM5Q9P217 1185 aa7.71□□□□□ -1.18
CTDNEP1-204ENST00000570484 PGAP2Q9UHJ9 254 aa7.71□□□□□ -1.18
CTDNEP1-204ENST00000570484 ZBTB21Q9ULJ3 1066 aa7.71□□□□□ -1.18
CTDNEP1-204ENST00000570484 RBM19Q9Y4C8 960 aaKnown RBP7.71□□□□□ -1.18
CTDNEP1-204ENST00000570484 SLC12A7Q9Y666 1083 aa7.71□□□□□ -1.18
CTDNEP1-204ENST00000570484 KLF18A0A0U1RQI7 1052 aa7.7□□□□□ -1.18
CTDNEP1-204ENST00000570484 GOLGA8AA7E2F4 631 aa7.7□□□□□ -1.18
CTDNEP1-204ENST00000570484 K7ELQ4 463 aaPredicted RBP7.7□□□□□ -1.18
CTDNEP1-204ENST00000570484 ARHGAP33O14559 1287 aa7.7□□□□□ -1.18
CTDNEP1-204ENST00000570484 CTNND1O60716 968 aaKnown RBP7.7□□□□□ -1.18
CTDNEP1-204ENST00000570484 DDAH1O94760 285 aa7.7□□□□□ -1.18
CTDNEP1-204ENST00000570484 TTLL1O95922 423 aa7.7□□□□□ -1.18
CTDNEP1-204ENST00000570484 CAP2P40123 477 aa7.7□□□□□ -1.18
CTDNEP1-204ENST00000570484 PBX2P40425 430 aa7.7□□□□□ -1.18
CTDNEP1-204ENST00000570484 ANTXR2P58335 489 aa7.7□□□□□ -1.18
CTDNEP1-204ENST00000570484 CATIPQ7Z7H3 387 aa7.7□□□□□ -1.18
CTDNEP1-204ENST00000570484 MICU3Q86XE3 530 aa7.7□□□□□ -1.18
CTDNEP1-204ENST00000570484 SCYL3Q8IZE3 742 aa7.7□□□□□ -1.18
CTDNEP1-204ENST00000570484 ENAHQ8N8S7 591 aaPredicted RBP7.7□□□□□ -1.18
CTDNEP1-204ENST00000570484 CHMP4CQ96CF2 233 aa7.7□□□□□ -1.18
CTDNEP1-204ENST00000570484 CEP95Q96GE4 821 aa7.7□□□□□ -1.18
CTDNEP1-204ENST00000570484 HS3ST6Q96QI5 342 aa7.7□□□□□ -1.18
CTDNEP1-204ENST00000570484 KANSL2Q9H9L4 492 aa7.7□□□□□ -1.18
CTDNEP1-204ENST00000570484 AS3MTQ9HBK9 375 aa7.7□□□□□ -1.18
CTDNEP1-204ENST00000570484 SH2B1Q9NRF2 756 aaPredicted RBP7.7□□□□□ -1.18
CTDNEP1-204ENST00000570484 TCP11L1Q9NUJ3 509 aa7.7□□□□□ -1.18
CTDNEP1-204ENST00000570484 LIMCH1Q9UPQ0 1083 aa7.7□□□□□ -1.18
CTDNEP1-204ENST00000570484 MTMR7Q9Y216 660 aa7.7□□□□□ -1.18
CTDNEP1-204ENST00000570484 CDK5RAP2Q96SN8 1893 aa7.69□□□□□ -1.18
CTDNEP1-204ENST00000570484 FAM205CA6NFA0 338 aa7.69□□□□□ -1.18
CTDNEP1-204ENST00000570484 TRAF5O00463 557 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms