RNA–Protein interactions for RNA: ENST00000560462.1

HERC1-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 647 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-208ENST00000560462 MAPK4P31152 587 aa8.36□□□□□ -1.07
HERC1-208ENST00000560462 VCPP55072 806 aaKnown RBP8.36□□□□□ -1.07
HERC1-208ENST00000560462 GRB10Q13322 594 aa8.36□□□□□ -1.07
HERC1-208ENST00000560462 NBPF20Q3BBV1 942 aa8.36□□□□□ -1.07
HERC1-208ENST00000560462 FKBP1CQ5VVH2 108 aa8.36□□□□□ -1.07
HERC1-208ENST00000560462 MYSM1Q5VVJ2 828 aa8.36□□□□□ -1.07
HERC1-208ENST00000560462 MCTP2Q6DN12 878 aa8.36□□□□□ -1.07
HERC1-208ENST00000560462 ADHFE1Q8IWW8 467 aa8.36□□□□□ -1.07
HERC1-208ENST00000560462 CCAR1Q8IX12 1150 aaKnown RBP8.36□□□□□ -1.07
HERC1-208ENST00000560462 PLSCR2Q9NRY7 297 aa8.36□□□□□ -1.07
HERC1-208ENST00000560462 FAM50BQ9Y247 325 aa8.36□□□□□ -1.07
HERC1-208ENST00000560462 KMT2EQ8IZD2 1858 aa8.36□□□□□ -1.07
HERC1-208ENST00000560462 GBF1Q92538 1859 aa8.36□□□□□ -1.07
HERC1-208ENST00000560462 ASPMQ8IZT6 3477 aa8.35□□□□□ -1.07
HERC1-208ENST00000560462 PDE8AO60658 829 aa8.35□□□□□ -1.07
HERC1-208ENST00000560462 FGBP02675 491 aa8.35□□□□□ -1.07
HERC1-208ENST00000560462 IL1R1P14778 569 aa8.35□□□□□ -1.07
HERC1-208ENST00000560462 AVPR2P30518 371 aa8.35□□□□□ -1.07
HERC1-208ENST00000560462 PRKAR2BP31323 418 aa8.35□□□□□ -1.07
HERC1-208ENST00000560462 PABPC4Q13310 644 aaKnown RBP eCLIP8.35□□□□□ -1.07
HERC1-208ENST00000560462 LRRC41Q15345 812 aa8.35□□□□□ -1.07
HERC1-208ENST00000560462 TMEM67Q5HYA8 995 aa8.35□□□□□ -1.07
HERC1-208ENST00000560462 MFSD14BQ5SR56 506 aa8.35□□□□□ -1.07
HERC1-208ENST00000560462 MORN1Q5T089 497 aa8.35□□□□□ -1.07
HERC1-208ENST00000560462 TYW1BQ6NUM6 668 aa8.35□□□□□ -1.07
HERC1-208ENST00000560462 ANKRD33Q7Z3H0 272 aa8.35□□□□□ -1.07
HERC1-208ENST00000560462 FRMD5Q7Z6J6 570 aa8.35□□□□□ -1.07
HERC1-208ENST00000560462 SCYL3Q8IZE3 742 aa8.35□□□□□ -1.07
HERC1-208ENST00000560462 TOX2Q96NM4 488 aa8.35□□□□□ -1.07
HERC1-208ENST00000560462 ANKRD2Q9GZV1 360 aa8.35□□□□□ -1.07
HERC1-208ENST00000560462 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.35□□□□□ -1.07
HERC1-208ENST00000560462 DLL3Q9NYJ7 618 aa8.35□□□□□ -1.07
HERC1-208ENST00000560462 FLRT1Q9NZU1 646 aa8.35□□□□□ -1.07
HERC1-208ENST00000560462 TBX21Q9UL17 535 aa8.35□□□□□ -1.07
HERC1-208ENST00000560462 COG6Q9Y2V7 657 aa8.35□□□□□ -1.07
HERC1-208ENST00000560462 SLC4A7Q9Y6M7 1214 aa8.35□□□□□ -1.07
HERC1-208ENST00000560462 HTATSF1O43719 755 aaKnown RBP8.34□□□□□ -1.07
HERC1-208ENST00000560462 CLK2P49760 499 aaKnown RBP8.34□□□□□ -1.07
HERC1-208ENST00000560462 ATP2B2Q01814 1243 aa8.34□□□□□ -1.07
HERC1-208ENST00000560462 TMEM259Q4ZIN3 620 aa8.34□□□□□ -1.07
HERC1-208ENST00000560462 ANO1Q5XXA6 986 aa8.34□□□□□ -1.07
HERC1-208ENST00000560462 OTOP2Q7RTS6 562 aa8.34□□□□□ -1.07
HERC1-208ENST00000560462 ZNF804AQ7Z570 1209 aa8.34□□□□□ -1.07
HERC1-208ENST00000560462 GPR142Q7Z601 462 aa8.34□□□□□ -1.07
HERC1-208ENST00000560462 RNF135Q8IUD6 432 aa8.34□□□□□ -1.07
HERC1-208ENST00000560462 TRPV1Q8NER1 839 aa8.34□□□□□ -1.07
HERC1-208ENST00000560462 GPRC5AQ8NFJ5 357 aa8.34□□□□□ -1.07
HERC1-208ENST00000560462 PLBD2Q8NHP8 589 aa8.34□□□□□ -1.07
HERC1-208ENST00000560462 EDC3Q96F86 508 aaKnown RBP8.34□□□□□ -1.07
HERC1-208ENST00000560462 ASCC2Q9H1I8 757 aaPredicted RBP8.34□□□□□ -1.07
HERC1-208ENST00000560462 IL23AQ9NPF7 189 aa8.34□□□□□ -1.07
HERC1-208ENST00000560462 POLR3EQ9NVU0 708 aa8.34□□□□□ -1.07
HERC1-208ENST00000560462 PHF24Q9UPV7 400 aa8.34□□□□□ -1.07
HERC1-208ENST00000560462 PCDHGA10Q9Y5H3 936 aa8.34□□□□□ -1.07
HERC1-208ENST00000560462 FRYLO94915 3013 aa8.34□□□□□ -1.07
HERC1-208ENST00000560462 ZFYVE26Q68DK2 2539 aa8.33□□□□□ -1.08
HERC1-208ENST00000560462 CYBAP13498 195 aa8.33□□□□□ -1.08
HERC1-208ENST00000560462 ATP2A2P16615 1042 aaKnown RBP8.33□□□□□ -1.08
HERC1-208ENST00000560462 CYP2C19P33261 490 aa8.33□□□□□ -1.08
HERC1-208ENST00000560462 TRIM28Q13263 835 aaKnown RBP8.33□□□□□ -1.08
HERC1-208ENST00000560462 PLEKHH3Q7Z736 793 aa8.33□□□□□ -1.08
HERC1-208ENST00000560462 KIAA2013Q8IYS2 634 aa8.33□□□□□ -1.08
HERC1-208ENST00000560462 POP1Q99575 1024 aaKnown RBP8.33□□□□□ -1.08
HERC1-208ENST00000560462 POLR3GLQ9BT43 218 aa8.33□□□□□ -1.08
HERC1-208ENST00000560462 CWC22Q9HCG8 908 aaKnown RBP8.33□□□□□ -1.08
HERC1-208ENST00000560462 LMCD1Q9NZU5 365 aa8.33□□□□□ -1.08
HERC1-208ENST00000560462 A0A1W2PQ45 241 aaPredicted RBP8.32□□□□□ -1.08
HERC1-208ENST00000560462 A0A1W2PQY0 241 aa8.32□□□□□ -1.08
HERC1-208ENST00000560462 H3BQ06 376 aaPredicted RBP8.32□□□□□ -1.08
HERC1-208ENST00000560462 SEPT4O43236 478 aa8.32□□□□□ -1.08
HERC1-208ENST00000560462 LPXNO60711 386 aa8.32□□□□□ -1.08
HERC1-208ENST00000560462 ZIC2O95409 532 aaPredicted RBP8.32□□□□□ -1.08
HERC1-208ENST00000560462 RFC5P40937 340 aa8.32□□□□□ -1.08
HERC1-208ENST00000560462 PANK3Q9H999 370 aa8.32□□□□□ -1.08
HERC1-208ENST00000560462 DBF4Q9UBU7 674 aaPredicted RBP8.32□□□□□ -1.08
HERC1-208ENST00000560462 NAV2Q8IVL1 2488 aa8.32□□□□□ -1.08
HERC1-208ENST00000560462 PEX10O60683 326 aa8.31□□□□□ -1.08
HERC1-208ENST00000560462 IGHMBP2P38935 993 aaKnown RBP8.31□□□□□ -1.08
HERC1-208ENST00000560462 TAP1Q03518 808 aa8.31□□□□□ -1.08
HERC1-208ENST00000560462 DMWDQ09019 674 aa8.31□□□□□ -1.08
HERC1-208ENST00000560462 TSR1Q2NL82 804 aaKnown RBP8.31□□□□□ -1.08
HERC1-208ENST00000560462 TUSC1Q2TAM9 212 aa8.31□□□□□ -1.08
HERC1-208ENST00000560462 C15orf52Q6ZUT6 534 aaKnown RBP8.31□□□□□ -1.08
HERC1-208ENST00000560462 NEK9Q8TD19 979 aa8.31□□□□□ -1.08
HERC1-208ENST00000560462 FAM151AQ8WW52 585 aa8.31□□□□□ -1.08
HERC1-208ENST00000560462 TEKT1Q969V4 418 aa8.31□□□□□ -1.08
HERC1-208ENST00000560462 PPP1R12CQ9BZL4 782 aa8.31□□□□□ -1.08
HERC1-208ENST00000560462 PORCNQ9H237 461 aa8.31□□□□□ -1.08
HERC1-208ENST00000560462 TXNRD2Q9NNW7 524 aa8.31□□□□□ -1.08
HERC1-208ENST00000560462 ADGRG1Q9Y653 693 aa8.31□□□□□ -1.08
HERC1-208ENST00000560462 EP300Q09472 2414 aaPredicted RBP8.31□□□□□ -1.08
HERC1-208ENST00000560462 BPTFQ12830 3046 aa8.3□□□□□ -1.08
HERC1-208ENST00000560462 ZBBXA8MT70 800 aa8.3□□□□□ -1.08
HERC1-208ENST00000560462 PHF20L1A8MW92 1017 aa8.3□□□□□ -1.08
HERC1-208ENST00000560462 GLRX3O76003 335 aaKnown RBP8.3□□□□□ -1.08
HERC1-208ENST00000560462 CTSWP56202 376 aa8.3□□□□□ -1.08
HERC1-208ENST00000560462 IRX3P78415 501 aaPredicted RBP8.3□□□□□ -1.08
HERC1-208ENST00000560462 ZXDAP98168 799 aa8.3□□□□□ -1.08
HERC1-208ENST00000560462 FAM47AQ5JRC9 791 aa8.3□□□□□ -1.08
HERC1-208ENST00000560462 TTC13Q8NBP0 860 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms