RNA–Protein interactions for RNA: ENST00000560417.5

MARK3-220, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 3

Gene MARK3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-220ENST00000560417 TOP6BLQ8N6T0 577 aa8.32□□□□□ -1.08
MARK3-220ENST00000560417 RNF141Q8WVD5 230 aa8.32□□□□□ -1.08
MARK3-220ENST00000560417 ZMYM5Q9UJ78 669 aa8.32□□□□□ -1.08
MARK3-220ENST00000560417 CNTNAP4Q9C0A0 1308 aa8.31□□□□□ -1.08
MARK3-220ENST00000560417 ENPP3O14638 875 aa8.31□□□□□ -1.08
MARK3-220ENST00000560417 SHOXO15266 292 aa8.31□□□□□ -1.08
MARK3-220ENST00000560417 LEFTY1O75610 366 aa8.31□□□□□ -1.08
MARK3-220ENST00000560417 TP53P04637 393 aaPredicted RBP8.31□□□□□ -1.08
MARK3-220ENST00000560417 CANXP27824 592 aaKnown RBP8.31□□□□□ -1.08
MARK3-220ENST00000560417 ETV3P41162 512 aa8.31□□□□□ -1.08
MARK3-220ENST00000560417 SLC10A6Q3KNW5 377 aa8.31□□□□□ -1.08
MARK3-220ENST00000560417 ZNF513Q8N8E2 541 aaPredicted RBP8.31□□□□□ -1.08
MARK3-220ENST00000560417 ZNF512BQ96KM6 892 aaPredicted RBP8.31□□□□□ -1.08
MARK3-220ENST00000560417 HAUS7Q99871 368 aa8.31□□□□□ -1.08
MARK3-220ENST00000560417 ASPNQ9BXN1 380 aa8.31□□□□□ -1.08
MARK3-220ENST00000560417 KLHL25Q9H0H3 589 aa8.31□□□□□ -1.08
MARK3-220ENST00000560417 KANSL2Q9H9L4 492 aa8.31□□□□□ -1.08
MARK3-220ENST00000560417 RAXQ9Y2V3 346 aa8.31□□□□□ -1.08
MARK3-220ENST00000560417 HMX2A2RU54 273 aa8.3□□□□□ -1.08
MARK3-220ENST00000560417 DIAPH1O60610 1272 aaKnown RBP8.3□□□□□ -1.08
MARK3-220ENST00000560417 ADMP35318 185 aa8.3□□□□□ -1.08
MARK3-220ENST00000560417 RNF4P78317 190 aa8.3□□□□□ -1.08
MARK3-220ENST00000560417 RASSF7Q02833 373 aa8.3□□□□□ -1.08
MARK3-220ENST00000560417 EGFLAMQ63HQ2 1017 aa8.3□□□□□ -1.08
MARK3-220ENST00000560417 DCAF15Q66K64 600 aa8.3□□□□□ -1.08
MARK3-220ENST00000560417 SH3TC2Q8TF17 1288 aa8.3□□□□□ -1.08
MARK3-220ENST00000560417 TP53INP1Q96A56 240 aa8.3□□□□□ -1.08
MARK3-220ENST00000560417 C7orf69Q9H7B7 122 aa8.3□□□□□ -1.08
MARK3-220ENST00000560417 ANKRD34BA5PLL1 514 aa8.29□□□□□ -1.08
MARK3-220ENST00000560417 EPHX1P07099 455 aa8.29□□□□□ -1.08
MARK3-220ENST00000560417 FAM87AP0C7U9 286 aa8.29□□□□□ -1.08
MARK3-220ENST00000560417 OGFOD3Q6PK18 319 aa8.29□□□□□ -1.08
MARK3-220ENST00000560417 PRR23CQ6ZRP0 262 aa8.29□□□□□ -1.08
MARK3-220ENST00000560417 ZAR1Q86SH2 424 aa8.29□□□□□ -1.08
MARK3-220ENST00000560417 CCDC144CPQ8IYA2 1237 aa8.29□□□□□ -1.08
MARK3-220ENST00000560417 GIMAP7Q8NHV1 300 aa8.29□□□□□ -1.08
MARK3-220ENST00000560417 COX4I2Q96KJ9 171 aa8.29□□□□□ -1.08
MARK3-220ENST00000560417 FAM86C1Q9NVL1 165 aa8.29□□□□□ -1.08
MARK3-220ENST00000560417 RBAK-RBAKDNI3L0D1 243 aa8.28□□□□□ -1.08
MARK3-220ENST00000560417 AUHQ13825 339 aaKnown RBP8.28□□□□□ -1.08
MARK3-220ENST00000560417 TCEAL1Q15170 157 aa8.28□□□□□ -1.08
MARK3-220ENST00000560417 NBPF9Q3BBW0 867 aa8.28□□□□□ -1.08
MARK3-220ENST00000560417 C2orf27AQ580R0 203 aa8.28□□□□□ -1.08
MARK3-220ENST00000560417 C7orf61Q8IZ16 206 aa8.28□□□□□ -1.08
MARK3-220ENST00000560417 THAP3Q8WTV1 239 aaPredicted RBP8.28□□□□□ -1.08
MARK3-220ENST00000560417 MKRN2Q9H000 416 aaKnown RBP8.28□□□□□ -1.08
MARK3-220ENST00000560417 STOML1Q9UBI4 398 aa8.28□□□□□ -1.08
MARK3-220ENST00000560417 PFDN2Q9UHV9 154 aa8.28□□□□□ -1.08
MARK3-220ENST00000560417 ZNF451Q9Y4E5 1061 aa8.28□□□□□ -1.08
MARK3-220ENST00000560417 KDM2BQ8NHM5 1336 aa8.28□□□□□ -1.08
MARK3-220ENST00000560417 CD247P20963 164 aa8.27□□□□□ -1.09
MARK3-220ENST00000560417 CYP7A1P22680 504 aa8.27□□□□□ -1.09
MARK3-220ENST00000560417 HSD3B2P26439 372 aa8.27□□□□□ -1.09
MARK3-220ENST00000560417 SQSTM1Q13501 440 aa8.27□□□□□ -1.09
MARK3-220ENST00000560417 PLA2G4EQ3MJ16 856 aa8.27□□□□□ -1.09
MARK3-220ENST00000560417 HEATR6Q6AI08 1181 aaKnown RBP8.27□□□□□ -1.09
MARK3-220ENST00000560417 C22orf34Q6ZV56 151 aa8.27□□□□□ -1.09
MARK3-220ENST00000560417 SHISA5Q8N114 240 aa8.27□□□□□ -1.09
MARK3-220ENST00000560417 SGSM3Q96HU1 749 aa8.27□□□□□ -1.09
MARK3-220ENST00000560417 Q96M66 194 aa8.27□□□□□ -1.09
MARK3-220ENST00000560417 HEXIM2Q96MH2 286 aaKnown RBP8.27□□□□□ -1.09
MARK3-220ENST00000560417 TBC1D32Q96NH3 1257 aa8.27□□□□□ -1.09
MARK3-220ENST00000560417 TPSG1Q9NRR2 321 aa8.27□□□□□ -1.09
MARK3-220ENST00000560417 TMEM260Q9NX78 707 aa8.27□□□□□ -1.09
MARK3-220ENST00000560417 IGF2BP3O00425 579 aaKnown RBP eCLIP8.26□□□□□ -1.09
MARK3-220ENST00000560417 ADCY3O60266 1144 aa8.26□□□□□ -1.09
MARK3-220ENST00000560417 CAPNS1P04632 268 aa8.26□□□□□ -1.09
MARK3-220ENST00000560417 NAT2P11245 290 aa8.26□□□□□ -1.09
MARK3-220ENST00000560417 CHMP4BP1P59074 171 aa8.26□□□□□ -1.09
MARK3-220ENST00000560417 SSRP1Q08945 709 aaKnown RBP8.26□□□□□ -1.09
MARK3-220ENST00000560417 APBA2Q99767 749 aa8.26□□□□□ -1.09
MARK3-220ENST00000560417 SPATA9Q9BWV2 254 aa8.26□□□□□ -1.09
MARK3-220ENST00000560417 GP6Q9HCN6 339 aa8.26□□□□□ -1.09
MARK3-220ENST00000560417 PRDM5Q9NQX1 630 aaPredicted RBP8.26□□□□□ -1.09
MARK3-220ENST00000560417 APEX2Q9UBZ4 518 aa8.26□□□□□ -1.09
MARK3-220ENST00000560417 TPX2Q9ULW0 747 aaKnown RBP8.26□□□□□ -1.09
MARK3-220ENST00000560417 LRRN2O75325 713 aa8.25□□□□□ -1.09
MARK3-220ENST00000560417 ZNF865P0CJ78 1059 aaPredicted RBP8.25□□□□□ -1.09
MARK3-220ENST00000560417 LONRF2Q1L5Z9 754 aa8.25□□□□□ -1.09
MARK3-220ENST00000560417 SFRP5Q5T4F7 317 aa8.25□□□□□ -1.09
MARK3-220ENST00000560417 RNF43Q68DV7 783 aa8.25□□□□□ -1.09
MARK3-220ENST00000560417 LRRC47Q8N1G4 583 aaKnown RBP8.25□□□□□ -1.09
MARK3-220ENST00000560417 FGD4Q96M96 766 aa8.25□□□□□ -1.09
MARK3-220ENST00000560417 PRR13Q9NZ81 148 aa8.25□□□□□ -1.09
MARK3-220ENST00000560417 WHRNQ9P202 907 aa8.25□□□□□ -1.09
MARK3-220ENST00000560417 LEMD3Q9Y2U8 911 aa8.25□□□□□ -1.09
MARK3-220ENST00000560417 A0A087WZG4 1122 aa8.24□□□□□ -1.09
MARK3-220ENST00000560417 A0A1W2PQU0 124 aa8.24□□□□□ -1.09
MARK3-220ENST00000560417 IQCA1LA6NCM1 817 aa8.24□□□□□ -1.09
MARK3-220ENST00000560417 F13BP05160 661 aa8.24□□□□□ -1.09
MARK3-220ENST00000560417 KIR3DL1P43629 444 aa8.24□□□□□ -1.09
MARK3-220ENST00000560417 SNW1Q13573 536 aaKnown RBP8.24□□□□□ -1.09
MARK3-220ENST00000560417 SV2CQ496J9 727 aa8.24□□□□□ -1.09
MARK3-220ENST00000560417 PLEKHG4Q58EX7 1191 aa8.24□□□□□ -1.09
MARK3-220ENST00000560417 GPAT2Q6NUI2 795 aa8.24□□□□□ -1.09
MARK3-220ENST00000560417 ZNF765Q7L2R6 523 aa8.24□□□□□ -1.09
MARK3-220ENST00000560417 ZBTB38Q8NAP3 1195 aaPredicted RBP8.24□□□□□ -1.09
MARK3-220ENST00000560417 DTWD2Q8NBA8 298 aa8.24□□□□□ -1.09
MARK3-220ENST00000560417 RCC1LQ96I51 464 aaKnown RBP8.24□□□□□ -1.09
MARK3-220ENST00000560417 GTF2IRD1Q9UHL9 959 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms