RNA–Protein interactions for RNA: ENST00000557365.1

APEX1-219, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 3

Gene APEX1, Length 831 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-219ENST00000557365 YY1P25490 414 aa14□□□□□ -0.17
APEX1-219ENST00000557365 KIF5BP33176 963 aa14□□□□□ -0.17
APEX1-219ENST00000557365 GNAQP50148 359 aa14□□□□□ -0.17
APEX1-219ENST00000557365 METAP2P50579 478 aaKnown RBP eCLIP14□□□□□ -0.17
APEX1-219ENST00000557365 USP14P54578 494 aa14□□□□□ -0.17
APEX1-219ENST00000557365 PPATQ06203 517 aa14□□□□□ -0.17
APEX1-219ENST00000557365 FSTL1Q12841 308 aa14□□□□□ -0.17
APEX1-219ENST00000557365 GRM4Q14833 912 aa14□□□□□ -0.17
APEX1-219ENST00000557365 C2orf69Q8N8R5 385 aa14□□□□□ -0.17
APEX1-219ENST00000557365 DCAF4Q8WV16 495 aa14□□□□□ -0.17
APEX1-219ENST00000557365 ZKSCAN4Q969J2 545 aaPredicted RBP14□□□□□ -0.17
APEX1-219ENST00000557365 GMCL1Q96IK5 515 aa14□□□□□ -0.17
APEX1-219ENST00000557365 LZTS2Q9BRK4 669 aa14□□□□□ -0.17
APEX1-219ENST00000557365 KIAA1683Q9H0B3 1180 aa14□□□□□ -0.17
APEX1-219ENST00000557365 GBA2Q9HCG7 927 aaPredicted RBP14□□□□□ -0.17
APEX1-219ENST00000557365 ZSCAN21Q9Y5A6 473 aaPredicted RBP14□□□□□ -0.17
APEX1-219ENST00000557365 SNCAIPQ9Y6H5 919 aa14□□□□□ -0.17
APEX1-219ENST00000557365 A0A1W2PRG0 241 aa13.99□□□□□ -0.17
APEX1-219ENST00000557365 PALM3A6NDB9 673 aaPredicted RBP13.99□□□□□ -0.17
APEX1-219ENST00000557365 CDKL5O76039 1030 aa13.99□□□□□ -0.17
APEX1-219ENST00000557365 LARGE1O95461 756 aa13.99□□□□□ -0.17
APEX1-219ENST00000557365 SCRN1Q12765 414 aa13.99□□□□□ -0.17
APEX1-219ENST00000557365 VGLL4Q14135 290 aa13.99□□□□□ -0.17
APEX1-219ENST00000557365 RTN1Q16799 776 aa13.99□□□□□ -0.17
APEX1-219ENST00000557365 SHROOM1Q2M3G4 852 aaPredicted RBP13.99□□□□□ -0.17
APEX1-219ENST00000557365 ASPRV1Q53RT3 343 aa13.99□□□□□ -0.17
APEX1-219ENST00000557365 GPATCH4Q5T3I0 446 aaKnown RBP13.99□□□□□ -0.17
APEX1-219ENST00000557365 CPLX2Q6PUV4 134 aaKnown RBP13.99□□□□□ -0.17
APEX1-219ENST00000557365 ERO1BQ86YB8 467 aa13.99□□□□□ -0.17
APEX1-219ENST00000557365 ZNF280CQ8ND82 737 aa13.99□□□□□ -0.17
APEX1-219ENST00000557365 CTCFLQ8NI51 663 aaPredicted RBP13.99□□□□□ -0.17
APEX1-219ENST00000557365 LPAR1Q92633 364 aa13.99□□□□□ -0.17
APEX1-219ENST00000557365 GOPCQ9HD26 462 aa13.99□□□□□ -0.17
APEX1-219ENST00000557365 FAM217BQ9NTX9 383 aaPredicted RBP13.99□□□□□ -0.17
APEX1-219ENST00000557365 PTPRFP10586 1907 aa13.98□□□□□ -0.17
APEX1-219ENST00000557365 SPDYE5A6NIY4 337 aa13.98□□□□□ -0.17
APEX1-219ENST00000557365 GOLGA8AA7E2F4 631 aa13.98□□□□□ -0.17
APEX1-219ENST00000557365 USP17L10C9JJH3 530 aa13.98□□□□□ -0.17
APEX1-219ENST00000557365 F5H6K3 240 aa13.98□□□□□ -0.17
APEX1-219ENST00000557365 CXCL11O14625 94 aa13.98□□□□□ -0.17
APEX1-219ENST00000557365 PLA2G6O60733 806 aa13.98□□□□□ -0.17
APEX1-219ENST00000557365 CELF2O95319 508 aaKnown RBP13.98□□□□□ -0.17
APEX1-219ENST00000557365 PDHBP11177 359 aa13.98□□□□□ -0.17
APEX1-219ENST00000557365 IFNAR1P17181 557 aa13.98□□□□□ -0.17
APEX1-219ENST00000557365 BACE1P56817 501 aa13.98□□□□□ -0.17
APEX1-219ENST00000557365 KLRC3Q07444 240 aa13.98□□□□□ -0.17
APEX1-219ENST00000557365 TTLL12Q14166 644 aaPredicted RBP13.98□□□□□ -0.17
APEX1-219ENST00000557365 SH3D19Q5HYK7 790 aa13.98□□□□□ -0.17
APEX1-219ENST00000557365 CST9Q5W186 159 aa13.98□□□□□ -0.17
APEX1-219ENST00000557365 NOL8Q76FK4 1167 aaKnown RBP13.98□□□□□ -0.17
APEX1-219ENST00000557365 MICU3Q86XE3 530 aa13.98□□□□□ -0.17
APEX1-219ENST00000557365 CLEC10AQ8IUN9 316 aa13.98□□□□□ -0.17
APEX1-219ENST00000557365 ZNF784Q8NCA9 323 aaPredicted RBP13.98□□□□□ -0.17
APEX1-219ENST00000557365 RGS22Q8NE09 1264 aa13.98□□□□□ -0.17
APEX1-219ENST00000557365 C12orf42Q96LP6 360 aa13.98□□□□□ -0.17
APEX1-219ENST00000557365 LARP6Q9BRS8 491 aaKnown RBP13.98□□□□□ -0.17
APEX1-219ENST00000557365 VCPKMTQ9H867 229 aa13.98□□□□□ -0.17
APEX1-219ENST00000557365 DAXXQ9UER7 740 aaPredicted RBP13.98□□□□□ -0.17
APEX1-219ENST00000557365 AFG3L2Q9Y4W6 797 aa13.98□□□□□ -0.17
APEX1-219ENST00000557365 PARP1P09874 1014 aaKnown RBP13.97□□□□□ -0.17
APEX1-219ENST00000557365 PDIA4P13667 645 aaKnown RBP13.97□□□□□ -0.17
APEX1-219ENST00000557365 HMGN5P82970 282 aaKnown RBP13.97□□□□□ -0.17
APEX1-219ENST00000557365 ATP2B2Q01814 1243 aa13.97□□□□□ -0.17
APEX1-219ENST00000557365 ST3GAL1Q11201 340 aa13.97□□□□□ -0.17
APEX1-219ENST00000557365 PPIL2Q13356 520 aa13.97□□□□□ -0.17
APEX1-219ENST00000557365 PRKG1Q13976 671 aa13.97□□□□□ -0.17
APEX1-219ENST00000557365 NTRK3Q16288 839 aa13.97□□□□□ -0.17
APEX1-219ENST00000557365 SLFN13Q68D06 897 aa13.97□□□□□ -0.17
APEX1-219ENST00000557365 CCDC83Q8IWF9 413 aa13.97□□□□□ -0.17
APEX1-219ENST00000557365 SMARCC2Q8TAQ2 1214 aa13.97□□□□□ -0.17
APEX1-219ENST00000557365 ACER1Q8TDN7 264 aa13.97□□□□□ -0.17
APEX1-219ENST00000557365 CWC22Q9HCG8 908 aaKnown RBP13.97□□□□□ -0.17
APEX1-219ENST00000557365 RBM27Q9P2N5 1060 aaKnown RBP13.97□□□□□ -0.17
APEX1-219ENST00000557365 MAD2L2Q9UI95 211 aa13.97□□□□□ -0.17
APEX1-219ENST00000557365 KCNH4Q9UQ05 1017 aa13.97□□□□□ -0.17
APEX1-219ENST00000557365 ZHX2Q9Y6X8 837 aa13.97□□□□□ -0.17
APEX1-219ENST00000557365 UBE2Q2LH0YL09 131 aa13.96□□□□□ -0.17
APEX1-219ENST00000557365 CPLX1O14810 134 aa13.96□□□□□ -0.17
APEX1-219ENST00000557365 NDUFB10O96000 172 aa13.96□□□□□ -0.17
APEX1-219ENST00000557365 CDC27P30260 824 aa13.96□□□□□ -0.17
APEX1-219ENST00000557365 ADD1P35611 737 aaKnown RBP13.96□□□□□ -0.17
APEX1-219ENST00000557365 ECE1P42892 770 aa13.96□□□□□ -0.17
APEX1-219ENST00000557365 CCT2P78371 535 aaKnown RBP13.96□□□□□ -0.17
APEX1-219ENST00000557365 ZNF543Q08ER8 600 aa13.96□□□□□ -0.17
APEX1-219ENST00000557365 SPP2Q13103 211 aa13.96□□□□□ -0.17
APEX1-219ENST00000557365 STK3Q13188 491 aa13.96□□□□□ -0.17
APEX1-219ENST00000557365 USP17L2Q6R6M4 530 aa13.96□□□□□ -0.17
APEX1-219ENST00000557365 BTNL9Q6UXG8 535 aa13.96□□□□□ -0.17
APEX1-219ENST00000557365 TMTC3Q6ZXV5 915 aa13.96□□□□□ -0.17
APEX1-219ENST00000557365 LRRC47Q8N1G4 583 aaKnown RBP13.96□□□□□ -0.17
APEX1-219ENST00000557365 NECAB1Q8N987 351 aa13.96□□□□□ -0.17
APEX1-219ENST00000557365 NUP133Q8WUM0 1156 aa13.96□□□□□ -0.17
APEX1-219ENST00000557365 SLC10A4Q96EP9 437 aa13.96□□□□□ -0.17
APEX1-219ENST00000557365 SPZ1Q9BXG8 430 aa13.96□□□□□ -0.17
APEX1-219ENST00000557365 NAP1L2Q9ULW6 460 aaPredicted RBP13.96□□□□□ -0.17
APEX1-219ENST00000557365 FZD1Q9UP38 647 aa13.96□□□□□ -0.17
APEX1-219ENST00000557365 MYH6P13533 1939 aa13.96□□□□□ -0.18
APEX1-219ENST00000557365 STK36Q9NRP7 1315 aa13.95□□□□□ -0.18
APEX1-219ENST00000557365 WDR46O15213 610 aaKnown RBP13.95□□□□□ -0.18
APEX1-219ENST00000557365 BMP3P12645 472 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms