RNA–Protein interactions for RNA: ENST00000549341.1

DEPDC4-208, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 541 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-208ENST00000549341 C8orf34Q49A92 452 aa8.57□□□□□ -1.04
DEPDC4-208ENST00000549341 CAVIN4Q5BKX8 364 aa8.57□□□□□ -1.04
DEPDC4-208ENST00000549341 TREML2Q5T2D2 321 aa8.57□□□□□ -1.04
DEPDC4-208ENST00000549341 SKAP1Q86WV1 359 aa8.57□□□□□ -1.04
DEPDC4-208ENST00000549341 RHPN1Q8TCX5 695 aa8.57□□□□□ -1.04
DEPDC4-208ENST00000549341 FAM151AQ8WW52 585 aa8.57□□□□□ -1.04
DEPDC4-208ENST00000549341 TRIB2Q92519 343 aa8.57□□□□□ -1.04
DEPDC4-208ENST00000549341 DAXXQ9UER7 740 aaPredicted RBP8.57□□□□□ -1.04
DEPDC4-208ENST00000549341 ZNF112Q9UJU3 913 aa8.57□□□□□ -1.04
DEPDC4-208ENST00000549341 OGDHLQ9ULD0 1010 aa8.57□□□□□ -1.04
DEPDC4-208ENST00000549341 CDC45O75419 566 aa8.56□□□□□ -1.04
DEPDC4-208ENST00000549341 IFIT2P09913 472 aaKnown RBP8.56□□□□□ -1.04
DEPDC4-208ENST00000549341 MX1P20591 662 aa8.56□□□□□ -1.04
DEPDC4-208ENST00000549341 CYP2B6P20813 491 aa8.56□□□□□ -1.04
DEPDC4-208ENST00000549341 PLA2G5P39877 138 aa8.56□□□□□ -1.04
DEPDC4-208ENST00000549341 RABL6Q3YEC7 729 aaPredicted RBP8.56□□□□□ -1.04
DEPDC4-208ENST00000549341 METTL24Q5JXM2 366 aa8.56□□□□□ -1.04
DEPDC4-208ENST00000549341 TTC22Q5TAA0 569 aa8.56□□□□□ -1.04
DEPDC4-208ENST00000549341 CDC42EP5Q6NZY7 148 aa8.56□□□□□ -1.04
DEPDC4-208ENST00000549341 BLOC1S3Q6QNY0 202 aa8.56□□□□□ -1.04
DEPDC4-208ENST00000549341 PADI6Q6TGC4 694 aa8.56□□□□□ -1.04
DEPDC4-208ENST00000549341 PLEKHM2Q8IWE5 1019 aa8.56□□□□□ -1.04
DEPDC4-208ENST00000549341 ZSCAN29Q8IWY8 852 aaPredicted RBP8.56□□□□□ -1.04
DEPDC4-208ENST00000549341 SYMPKQ92797 1274 aaKnown RBP8.56□□□□□ -1.04
DEPDC4-208ENST00000549341 EMID1Q96A84 441 aaPredicted RBP8.56□□□□□ -1.04
DEPDC4-208ENST00000549341 FAM122AQ96E09 287 aa8.56□□□□□ -1.04
DEPDC4-208ENST00000549341 BCL11AQ9H165 835 aa8.56□□□□□ -1.04
DEPDC4-208ENST00000549341 OSBPL3Q9H4L5 887 aa8.56□□□□□ -1.04
DEPDC4-208ENST00000549341 AGTPBP1Q9UPW5 1226 aa8.56□□□□□ -1.04
DEPDC4-208ENST00000549341 DAGLAQ9Y4D2 1042 aa8.56□□□□□ -1.04
DEPDC4-208ENST00000549341 BDP1A6H8Y1 2624 aa8.56□□□□□ -1.04
DEPDC4-208ENST00000549341 MYH3P11055 1940 aa8.55□□□□□ -1.04
DEPDC4-208ENST00000549341 TNFRSF10AO00220 468 aa8.55□□□□□ -1.04
DEPDC4-208ENST00000549341 SMARCA5O60264 1052 aaPredicted RBP8.55□□□□□ -1.04
DEPDC4-208ENST00000549341 SLURP2P0DP57 97 aa8.55□□□□□ -1.04
DEPDC4-208ENST00000549341 ZKSCAN1P17029 563 aaPredicted RBP8.55□□□□□ -1.04
DEPDC4-208ENST00000549341 PDE1AP54750 535 aa8.55□□□□□ -1.04
DEPDC4-208ENST00000549341 FBXO33Q7Z6M2 555 aa8.55□□□□□ -1.04
DEPDC4-208ENST00000549341 ZFPM1Q8IX07 1006 aa8.55□□□□□ -1.04
DEPDC4-208ENST00000549341 COPRSQ9NQ92 184 aa8.55□□□□□ -1.04
DEPDC4-208ENST00000549341 PRDM5Q9NQX1 630 aaPredicted RBP8.55□□□□□ -1.04
DEPDC4-208ENST00000549341 USP40Q9NVE5 1235 aa8.55□□□□□ -1.04
DEPDC4-208ENST00000549341 PRKAG2Q9UGJ0 569 aa8.55□□□□□ -1.04
DEPDC4-208ENST00000549341 SLC45A1Q9Y2W3 748 aa8.55□□□□□ -1.04
DEPDC4-208ENST00000549341 AFG3L2Q9Y4W6 797 aa8.55□□□□□ -1.04
DEPDC4-208ENST00000549341 COL2A1P02458 1487 aaPredicted RBP8.55□□□□□ -1.04
DEPDC4-208ENST00000549341 TTC41PQ6P2S7 1318 aa8.54□□□□□ -1.04
DEPDC4-208ENST00000549341 MROH5Q6ZUA9 1318 aa8.54□□□□□ -1.04
DEPDC4-208ENST00000549341 DDX60LQ5H9U9 1706 aaKnown RBP8.54□□□□□ -1.04
DEPDC4-208ENST00000549341 ALPK3Q96L96 1907 aa8.54□□□□□ -1.04
DEPDC4-208ENST00000549341 ATRNL1Q5VV63 1379 aa8.54□□□□□ -1.04
DEPDC4-208ENST00000549341 GDF9O60383 454 aa8.54□□□□□ -1.04
DEPDC4-208ENST00000549341 GLRX3O76003 335 aaKnown RBP8.54□□□□□ -1.04
DEPDC4-208ENST00000549341 COL6A1P12109 1028 aa8.54□□□□□ -1.04
DEPDC4-208ENST00000549341 HHIPL2Q6UWX4 724 aa8.54□□□□□ -1.04
DEPDC4-208ENST00000549341 SEMA6BQ9H3T3 888 aa8.54□□□□□ -1.04
DEPDC4-208ENST00000549341 PIEZO1Q92508 2521 aa8.53□□□□□ -1.04
DEPDC4-208ENST00000549341 PHF20L1A8MW92 1017 aa8.53□□□□□ -1.04
DEPDC4-208ENST00000549341 PEX10O60683 326 aa8.53□□□□□ -1.04
DEPDC4-208ENST00000549341 CIAO1O76071 339 aa8.53□□□□□ -1.04
DEPDC4-208ENST00000549341 PRDX5P30044 214 aa8.53□□□□□ -1.04
DEPDC4-208ENST00000549341 CCND3P30281 292 aaPredicted RBP8.53□□□□□ -1.04
DEPDC4-208ENST00000549341 IL15P40933 162 aaPredicted RBP8.53□□□□□ -1.04
DEPDC4-208ENST00000549341 HMGCS2P54868 508 aa8.53□□□□□ -1.04
DEPDC4-208ENST00000549341 PICALMQ13492 652 aa8.53□□□□□ -1.04
DEPDC4-208ENST00000549341 KMT5BQ4FZB7 885 aa8.53□□□□□ -1.04
DEPDC4-208ENST00000549341 LRRC24Q50LG9 513 aa8.53□□□□□ -1.04
DEPDC4-208ENST00000549341 C9orf50Q5SZB4 431 aa8.53□□□□□ -1.04
DEPDC4-208ENST00000549341 LIAT1Q6ZQX7 453 aa8.53□□□□□ -1.04
DEPDC4-208ENST00000549341 ERICH6Q7L0X2 663 aa8.53□□□□□ -1.04
DEPDC4-208ENST00000549341 USP38Q8NB14 1042 aa8.53□□□□□ -1.04
DEPDC4-208ENST00000549341 KAZALD1Q96I82 304 aa8.53□□□□□ -1.04
DEPDC4-208ENST00000549341 SENP6Q9GZR1 1112 aaPredicted RBP8.53□□□□□ -1.04
DEPDC4-208ENST00000549341 TTYH1Q9H313 450 aaPredicted RBP8.53□□□□□ -1.04
DEPDC4-208ENST00000549341 CWC22Q9HCG8 908 aaKnown RBP8.53□□□□□ -1.04
DEPDC4-208ENST00000549341 IL1RAPL2Q9NP60 686 aa8.53□□□□□ -1.04
DEPDC4-208ENST00000549341 NPDC1Q9NQX5 325 aaPredicted RBP8.53□□□□□ -1.04
DEPDC4-208ENST00000549341 AKAP2Q9Y2D5 859 aa8.53□□□□□ -1.04
DEPDC4-208ENST00000549341 ATP11BQ9Y2G3 1177 aa8.53□□□□□ -1.04
DEPDC4-208ENST00000549341 SUGT1Q9Y2Z0 365 aa8.53□□□□□ -1.04
DEPDC4-208ENST00000549341 A0A1B0GUL6 1792 aa8.53□□□□□ -1.04
DEPDC4-208ENST00000549341 DNAH12Q6ZR08 3092 aa8.52□□□□□ -1.04
DEPDC4-208ENST00000549341 FAM196BA6NMK8 535 aa8.52□□□□□ -1.05
DEPDC4-208ENST00000549341 HIP1O00291 1037 aa8.52□□□□□ -1.05
DEPDC4-208ENST00000549341 REC8O95072 547 aa8.52□□□□□ -1.05
DEPDC4-208ENST00000549341 GCLCP48506 637 aaPredicted RBP8.52□□□□□ -1.05
DEPDC4-208ENST00000549341 IRX3P78415 501 aaPredicted RBP8.52□□□□□ -1.05
DEPDC4-208ENST00000549341 CACNB2Q08289 660 aaPredicted RBP8.52□□□□□ -1.05
DEPDC4-208ENST00000549341 BECN1Q14457 450 aa8.52□□□□□ -1.05
DEPDC4-208ENST00000549341 SHHQ15465 462 aa8.52□□□□□ -1.05
DEPDC4-208ENST00000549341 CCL14Q16627 93 aa8.52□□□□□ -1.05
DEPDC4-208ENST00000549341 LCE2AQ5TA79 106 aaPredicted RBP8.52□□□□□ -1.05
DEPDC4-208ENST00000549341 MAP3K21Q5TCX8 1036 aa8.52□□□□□ -1.05
DEPDC4-208ENST00000549341 AACSQ86V21 672 aa8.52□□□□□ -1.05
DEPDC4-208ENST00000549341 CCAR1Q8IX12 1150 aaKnown RBP8.52□□□□□ -1.05
DEPDC4-208ENST00000549341 SOCS4Q8WXH5 440 aa8.52□□□□□ -1.05
DEPDC4-208ENST00000549341 PPM1EQ8WY54 764 aa8.52□□□□□ -1.05
DEPDC4-208ENST00000549341 NUDT12Q9BQG2 462 aa8.52□□□□□ -1.05
DEPDC4-208ENST00000549341 SIL1Q9H173 461 aa8.52□□□□□ -1.05
DEPDC4-208ENST00000549341 ASCC2Q9H1I8 757 aaPredicted RBP8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms