RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 UGGT1Q9NYU2 1555 aa13.9□□□□□ -0.18
COL4A6-209ENST00000545689 NCAPD2Q15021 1401 aa13.9□□□□□ -0.18
COL4A6-209ENST00000545689 LTKP29376 864 aa13.9□□□□□ -0.18
COL4A6-209ENST00000545689 RPS8P62241 208 aaKnown RBP13.9□□□□□ -0.18
COL4A6-209ENST00000545689 RPS6KA1Q15418 735 aa13.9□□□□□ -0.18
COL4A6-209ENST00000545689 SPATA1Q5VX52 437 aa13.9□□□□□ -0.18
COL4A6-209ENST00000545689 CCDC97Q96F63 343 aaPredicted RBP13.9□□□□□ -0.18
COL4A6-209ENST00000545689 POLR3EQ9NVU0 708 aa13.9□□□□□ -0.18
COL4A6-209ENST00000545689 EFCAB8A8MWE9 144 aa13.9□□□□□ -0.18
COL4A6-209ENST00000545689 MAP3K9P80192 1104 aa13.9□□□□□ -0.18
COL4A6-209ENST00000545689 LACTBP83111 547 aaPredicted RBP13.9□□□□□ -0.18
COL4A6-209ENST00000545689 DPP8Q6V1X1 898 aaPredicted RBP13.9□□□□□ -0.18
COL4A6-209ENST00000545689 IFIH1Q9BYX4 1025 aaKnown RBP13.9□□□□□ -0.18
COL4A6-209ENST00000545689 ADGRL3Q9HAR2 1447 aa13.9□□□□□ -0.18
COL4A6-209ENST00000545689 SMCO2A6NFE2 343 aa13.9□□□□□ -0.18
COL4A6-209ENST00000545689 NT5C2P49902 561 aa13.9□□□□□ -0.18
COL4A6-209ENST00000545689 CCDC63Q8NA47 563 aa13.9□□□□□ -0.18
COL4A6-209ENST00000545689 FOXP1Q9H334 677 aaPredicted RBP13.9□□□□□ -0.18
COL4A6-209ENST00000545689 SCG2P13521 617 aa13.89□□□□□ -0.19
COL4A6-209ENST00000545689 SLFN12Q8IYM2 578 aa13.89□□□□□ -0.19
COL4A6-209ENST00000545689 GOLGA5Q8TBA6 731 aa13.89□□□□□ -0.19
COL4A6-209ENST00000545689 SLF1Q9BQI6 1058 aa13.89□□□□□ -0.19
COL4A6-209ENST00000545689 SAR1BQ9Y6B6 198 aa13.89□□□□□ -0.19
COL4A6-209ENST00000545689 FGAP02671 866 aa13.89□□□□□ -0.19
COL4A6-209ENST00000545689 SCRN1Q12765 414 aa13.89□□□□□ -0.19
COL4A6-209ENST00000545689 FBXO18Q8NFZ0 1043 aa13.89□□□□□ -0.19
COL4A6-209ENST00000545689 ANKARQ7Z5J8 1434 aa13.89□□□□□ -0.19
COL4A6-209ENST00000545689 ZNF365Q70YC5 407 aa13.89□□□□□ -0.19
COL4A6-209ENST00000545689 INTS8Q75QN2 995 aaKnown RBP13.89□□□□□ -0.19
COL4A6-209ENST00000545689 TMOD4Q9NZQ9 345 aa13.89□□□□□ -0.19
COL4A6-209ENST00000545689 IKBKBO14920 756 aa13.89□□□□□ -0.19
COL4A6-209ENST00000545689 C17orf53Q8N3J3 647 aaPredicted RBP13.89□□□□□ -0.19
COL4A6-209ENST00000545689 TGFBRAP1Q8WUH2 860 aa13.89□□□□□ -0.19
COL4A6-209ENST00000545689 FAM212AQ96EL1 285 aa13.89□□□□□ -0.19
COL4A6-209ENST00000545689 EDC3Q96F86 508 aaKnown RBP13.89□□□□□ -0.19
COL4A6-209ENST00000545689 PNMA2Q9UL42 364 aa13.89□□□□□ -0.19
COL4A6-209ENST00000545689 TNKSO95271 1327 aa13.89□□□□□ -0.19
COL4A6-209ENST00000545689 TRIM37O94972 964 aa13.89□□□□□ -0.19
COL4A6-209ENST00000545689 ALDH1B1P30837 517 aa13.89□□□□□ -0.19
COL4A6-209ENST00000545689 PDE6BP35913 854 aa13.89□□□□□ -0.19
COL4A6-209ENST00000545689 ARHGAP25P42331 645 aa13.89□□□□□ -0.19
COL4A6-209ENST00000545689 INF2Q27J81 1249 aa13.89□□□□□ -0.19
COL4A6-209ENST00000545689 PPP2R2CQ9Y2T4 447 aa13.89□□□□□ -0.19
COL4A6-209ENST00000545689 CCDC169A6NNP5 214 aa13.88□□□□□ -0.19
COL4A6-209ENST00000545689 FYB2Q5VWT5 728 aa13.88□□□□□ -0.19
COL4A6-209ENST00000545689 RAB17Q9H0T7 212 aa13.88□□□□□ -0.19
COL4A6-209ENST00000545689 HAUS4Q9H6D7 363 aa13.88□□□□□ -0.19
COL4A6-209ENST00000545689 PICK1Q9NRD5 415 aa13.88□□□□□ -0.19
COL4A6-209ENST00000545689 ABCC3O15438 1527 aa13.88□□□□□ -0.19
COL4A6-209ENST00000545689 CHMP2AO43633 222 aa13.88□□□□□ -0.19
COL4A6-209ENST00000545689 ATP2B4P23634 1241 aa13.88□□□□□ -0.19
COL4A6-209ENST00000545689 MAPKAPK5Q8IW41 473 aa13.88□□□□□ -0.19
COL4A6-209ENST00000545689 TRMT44Q8IYL2 757 aaKnown RBP13.88□□□□□ -0.19
COL4A6-209ENST00000545689 MYOCDQ8IZQ8 938 aa13.88□□□□□ -0.19
COL4A6-209ENST00000545689 ZFP91Q96JP5 570 aaPredicted RBP13.88□□□□□ -0.19
COL4A6-209ENST00000545689 SEC62Q99442 399 aaKnown RBP13.88□□□□□ -0.19
COL4A6-209ENST00000545689 BLZF1Q9H2G9 400 aa13.88□□□□□ -0.19
COL4A6-209ENST00000545689 ZBED4O75132 1171 aa13.88□□□□□ -0.19
COL4A6-209ENST00000545689 SLC39A14Q15043 492 aa13.88□□□□□ -0.19
COL4A6-209ENST00000545689 MYCT1Q8N699 235 aa13.88□□□□□ -0.19
COL4A6-209ENST00000545689 SMIM23A6NLE4 172 aa13.88□□□□□ -0.19
COL4A6-209ENST00000545689 OR52Z1P0C646 297 aa13.88□□□□□ -0.19
COL4A6-209ENST00000545689 DNAJC21Q5F1R6 531 aaKnown RBP13.88□□□□□ -0.19
COL4A6-209ENST00000545689 BCL2L12Q9HB09 334 aa13.88□□□□□ -0.19
COL4A6-209ENST00000545689 CTTNBP2NLQ9P2B4 639 aa13.88□□□□□ -0.19
COL4A6-209ENST00000545689 AGTPBP1Q9UPW5 1226 aa13.88□□□□□ -0.19
COL4A6-209ENST00000545689 FAM169AQ9Y6X4 670 aa13.88□□□□□ -0.19
COL4A6-209ENST00000545689 N4BP1O75113 896 aaKnown RBP13.88□□□□□ -0.19
COL4A6-209ENST00000545689 FMNL1O95466 1100 aaPredicted RBP13.88□□□□□ -0.19
COL4A6-209ENST00000545689 POLA2Q14181 598 aa13.88□□□□□ -0.19
COL4A6-209ENST00000545689 DYMQ7RTS9 669 aa13.88□□□□□ -0.19
COL4A6-209ENST00000545689 MRPL44Q9H9J2 332 aaKnown RBP13.88□□□□□ -0.19
COL4A6-209ENST00000545689 HYOU1Q9Y4L1 999 aa13.88□□□□□ -0.19
COL4A6-209ENST00000545689 NDUFAB1O14561 156 aa13.87□□□□□ -0.19
COL4A6-209ENST00000545689 CARMIL3Q8ND23 1372 aa13.87□□□□□ -0.19
COL4A6-209ENST00000545689 CEP104O60308 925 aa13.87□□□□□ -0.19
COL4A6-209ENST00000545689 RNF26Q9BY78 433 aaPredicted RBP13.87□□□□□ -0.19
COL4A6-209ENST00000545689 STIM2Q9P246 746 aa13.87□□□□□ -0.19
COL4A6-209ENST00000545689 USP17L12C9JPN9 530 aa13.87□□□□□ -0.19
COL4A6-209ENST00000545689 USP17L21D6R901 530 aa13.87□□□□□ -0.19
COL4A6-209ENST00000545689 EXOC3O60645 756 aa13.87□□□□□ -0.19
COL4A6-209ENST00000545689 ETF1P62495 437 aaKnown RBP13.87□□□□□ -0.19
COL4A6-209ENST00000545689 NEK8Q86SG6 692 aa13.87□□□□□ -0.19
COL4A6-209ENST00000545689 GSDMAQ96QA5 445 aa13.87□□□□□ -0.19
COL4A6-209ENST00000545689 ANTXR1Q9H6X2 564 aa13.87□□□□□ -0.19
COL4A6-209ENST00000545689 FEZ2Q9UHY8 353 aaPredicted RBP13.87□□□□□ -0.19
COL4A6-209ENST00000545689 PEX26Q7Z412 305 aa13.87□□□□□ -0.19
COL4A6-209ENST00000545689 GPATCH11Q8N954 259 aa13.87□□□□□ -0.19
COL4A6-209ENST00000545689 SLAIN2Q9P270 581 aa13.87□□□□□ -0.19
COL4A6-209ENST00000545689 DBNLQ9UJU6 430 aaKnown RBP13.87□□□□□ -0.19
COL4A6-209ENST00000545689 PPFIA4O75335 1185 aa13.87□□□□□ -0.19
COL4A6-209ENST00000545689 PDE8BO95263 885 aa13.87□□□□□ -0.19
COL4A6-209ENST00000545689 GCNT3O95395 438 aa13.87□□□□□ -0.19
COL4A6-209ENST00000545689 SLC8A3P57103 927 aa13.87□□□□□ -0.19
COL4A6-209ENST00000545689 TRPC3Q13507 836 aa13.87□□□□□ -0.19
COL4A6-209ENST00000545689 TTLL7Q6ZT98 887 aa13.87□□□□□ -0.19
COL4A6-209ENST00000545689 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.87□□□□□ -0.19
COL4A6-209ENST00000545689 OAS2P29728 719 aaKnown RBP13.86□□□□□ -0.19
COL4A6-209ENST00000545689 EIF6P56537 245 aaKnown RBP13.86□□□□□ -0.19
COL4A6-209ENST00000545689 ARHGEF25Q86VW2 580 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms