RNA–Protein interactions for RNA: ENST00000541099.5

TRIT1-215, Transcript of tRNA isopentenyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene TRIT1, Length 545 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIT1-215ENST00000541099 TSPY3P0CV98 308 aa13.85□□□□□ -0.19
TRIT1-215ENST00000541099 TSPY8P0CW00 308 aa13.85□□□□□ -0.19
TRIT1-215ENST00000541099 ATP2B2Q01814 1243 aa13.85□□□□□ -0.19
TRIT1-215ENST00000541099 IMMTQ16891 758 aaKnown RBP13.85□□□□□ -0.19
TRIT1-215ENST00000541099 NOM1Q5C9Z4 860 aaKnown RBP13.85□□□□□ -0.19
TRIT1-215ENST00000541099 COL13A1Q5TAT6 717 aaPredicted RBP13.85□□□□□ -0.19
TRIT1-215ENST00000541099 MFSD6Q6ZSS7 791 aa13.85□□□□□ -0.19
TRIT1-215ENST00000541099 CYB5R4Q7L1T6 521 aa13.85□□□□□ -0.19
TRIT1-215ENST00000541099 SPICE1Q8N0Z3 855 aa13.85□□□□□ -0.19
TRIT1-215ENST00000541099 LRRC47Q8N1G4 583 aaKnown RBP13.85□□□□□ -0.19
TRIT1-215ENST00000541099 FEZ1Q99689 392 aa13.85□□□□□ -0.19
TRIT1-215ENST00000541099 ZFYVE28Q9HCC9 887 aa13.85□□□□□ -0.19
TRIT1-215ENST00000541099 ANO2Q9NQ90 1003 aa13.85□□□□□ -0.19
TRIT1-215ENST00000541099 PRDM10Q9NQV6 1147 aa13.85□□□□□ -0.19
TRIT1-215ENST00000541099 TMOD4Q9NZQ9 345 aa13.85□□□□□ -0.19
TRIT1-215ENST00000541099 CLIP2Q9UDT6 1046 aa13.85□□□□□ -0.19
TRIT1-215ENST00000541099 CTNNA3Q9UI47 895 aa13.85□□□□□ -0.19
TRIT1-215ENST00000541099 MYH8P13535 1937 aa13.85□□□□□ -0.19
TRIT1-215ENST00000541099 TSPY2A6NKD2 308 aa13.84□□□□□ -0.19
TRIT1-215ENST00000541099 SLC27A2O14975 620 aa13.84□□□□□ -0.19
TRIT1-215ENST00000541099 CNMDO75829 334 aa13.84□□□□□ -0.19
TRIT1-215ENST00000541099 NDUFB10O96000 172 aa13.84□□□□□ -0.19
TRIT1-215ENST00000541099 USP14P54578 494 aa13.84□□□□□ -0.19
TRIT1-215ENST00000541099 CATSPERGQ6ZRH7 1159 aa13.84□□□□□ -0.19
TRIT1-215ENST00000541099 RASEFQ8IZ41 740 aa13.84□□□□□ -0.19
TRIT1-215ENST00000541099 NUP88Q99567 741 aaPredicted RBP13.84□□□□□ -0.19
TRIT1-215ENST00000541099 ZKSCAN3Q9BRR0 538 aa13.84□□□□□ -0.19
TRIT1-215ENST00000541099 ARHGAP39Q9C0H5 1083 aa13.84□□□□□ -0.19
TRIT1-215ENST00000541099 RPAP3Q9H6T3 665 aaPredicted RBP13.84□□□□□ -0.19
TRIT1-215ENST00000541099 ZNF287Q9HBT7 754 aa13.84□□□□□ -0.19
TRIT1-215ENST00000541099 ARHGEF10LQ9HCE6 1279 aa13.84□□□□□ -0.19
TRIT1-215ENST00000541099 TXNRD2Q9NNW7 524 aa13.84□□□□□ -0.19
TRIT1-215ENST00000541099 TOMM22Q9NS69 142 aa13.84□□□□□ -0.19
TRIT1-215ENST00000541099 TCP11L1Q9NUJ3 509 aa13.84□□□□□ -0.19
TRIT1-215ENST00000541099 ZSWIM5Q9P217 1185 aa13.84□□□□□ -0.19
TRIT1-215ENST00000541099 CASP8AP2Q9UKL3 1982 aa13.83□□□□□ -0.19
TRIT1-215ENST00000541099 E7EWF7 191 aa13.83□□□□□ -0.2
TRIT1-215ENST00000541099 KDM4AO75164 1064 aa13.83□□□□□ -0.2
TRIT1-215ENST00000541099 TTLL1O95922 423 aa13.83□□□□□ -0.2
TRIT1-215ENST00000541099 PCP11498 1178 aaKnown RBP13.83□□□□□ -0.2
TRIT1-215ENST00000541099 CREB3L3Q68CJ9 461 aa13.83□□□□□ -0.2
TRIT1-215ENST00000541099 PARK7Q99497 189 aaKnown RBP13.83□□□□□ -0.2
TRIT1-215ENST00000541099 RNF41Q9H4P4 317 aaPredicted RBP13.83□□□□□ -0.2
TRIT1-215ENST00000541099 FBXO28Q9NVF7 368 aa13.83□□□□□ -0.2
TRIT1-215ENST00000541099 GTF3C3Q9Y5Q9 886 aa13.83□□□□□ -0.2
TRIT1-215ENST00000541099 USP17L15C9J2P7 530 aa13.82□□□□□ -0.2
TRIT1-215ENST00000541099 USP17L13C9JLJ4 530 aa13.82□□□□□ -0.2
TRIT1-215ENST00000541099 USP17L11C9JVI0 530 aa13.82□□□□□ -0.2
TRIT1-215ENST00000541099 USP17L18D6R9N7 530 aa13.82□□□□□ -0.2
TRIT1-215ENST00000541099 USP17L22D6RA61 530 aa13.82□□□□□ -0.2
TRIT1-215ENST00000541099 USP17L17D6RBQ6 530 aa13.82□□□□□ -0.2
TRIT1-215ENST00000541099 USP17L19D6RCP7 530 aa13.82□□□□□ -0.2
TRIT1-215ENST00000541099 USP17L20D6RJB6 530 aa13.82□□□□□ -0.2
TRIT1-215ENST00000541099 F5H6K3 240 aa13.82□□□□□ -0.2
TRIT1-215ENST00000541099 FKTNO75072 461 aa13.82□□□□□ -0.2
TRIT1-215ENST00000541099 ANTXR2P58335 489 aa13.82□□□□□ -0.2
TRIT1-215ENST00000541099 KLRC3Q07444 240 aa13.82□□□□□ -0.2
TRIT1-215ENST00000541099 USP17L24Q0WX57 530 aa13.82□□□□□ -0.2
TRIT1-215ENST00000541099 Q3C1V9 767 aa13.82□□□□□ -0.2
TRIT1-215ENST00000541099 KIAA1211Q6ZU35 1233 aa13.82□□□□□ -0.2
TRIT1-215ENST00000541099 CD99L2Q8TCZ2 262 aa13.82□□□□□ -0.2
TRIT1-215ENST00000541099 CHMP4CQ96CF2 233 aa13.82□□□□□ -0.2
TRIT1-215ENST00000541099 TMEM47Q9BQJ4 181 aa13.82□□□□□ -0.2
TRIT1-215ENST00000541099 SENP2Q9HC62 589 aa13.82□□□□□ -0.2
TRIT1-215ENST00000541099 RBPJLQ9UBG7 517 aa13.82□□□□□ -0.2
TRIT1-215ENST00000541099 ZSWIM8A7E2V4 1837 aa13.81□□□□□ -0.2
TRIT1-215ENST00000541099 SPDYE16A6NNV3 312 aaPredicted RBP13.81□□□□□ -0.2
TRIT1-215ENST00000541099 ECM2O94769 699 aaPredicted RBP13.81□□□□□ -0.2
TRIT1-215ENST00000541099 HERVK_113P62684 666 aa13.81□□□□□ -0.2
TRIT1-215ENST00000541099 SP3Q02447 781 aa13.81□□□□□ -0.2
TRIT1-215ENST00000541099 FAM83BQ5T0W9 1011 aa13.81□□□□□ -0.2
TRIT1-215ENST00000541099 MB21D2Q8IYB1 491 aaPredicted RBP13.81□□□□□ -0.2
TRIT1-215ENST00000541099 ANKRD13CQ8N6S4 541 aa13.81□□□□□ -0.2
TRIT1-215ENST00000541099 LPAR1Q92633 364 aa13.81□□□□□ -0.2
TRIT1-215ENST00000541099 ESR2Q92731 530 aa13.81□□□□□ -0.2
TRIT1-215ENST00000541099 KCNB2Q92953 911 aa13.81□□□□□ -0.2
TRIT1-215ENST00000541099 GPHNQ9NQX3 736 aaPredicted RBP13.81□□□□□ -0.2
TRIT1-215ENST00000541099 RLFQ13129 1914 aa13.8□□□□□ -0.2
TRIT1-215ENST00000541099 HTTP42858 3142 aa13.8□□□□□ -0.2
TRIT1-215ENST00000541099 WDR46O15213 610 aaKnown RBP13.8□□□□□ -0.2
TRIT1-215ENST00000541099 OSBPP22059 807 aa13.8□□□□□ -0.2
TRIT1-215ENST00000541099 SEC23AQ15436 765 aa13.8□□□□□ -0.2
TRIT1-215ENST00000541099 SLFN13Q68D06 897 aa13.8□□□□□ -0.2
TRIT1-215ENST00000541099 CHST3Q7LGC8 479 aa13.8□□□□□ -0.2
TRIT1-215ENST00000541099 ENAHQ8N8S7 591 aaPredicted RBP13.8□□□□□ -0.2
TRIT1-215ENST00000541099 GMCL1P1Q8NEA9 526 aa13.8□□□□□ -0.2
TRIT1-215ENST00000541099 ANKS1AQ92625 1134 aa13.8□□□□□ -0.2
TRIT1-215ENST00000541099 BTBD7Q9P203 1132 aa13.8□□□□□ -0.2
TRIT1-215ENST00000541099 STX8Q9UNK0 236 aa13.8□□□□□ -0.2
TRIT1-215ENST00000541099 SEC24BO95487 1268 aa13.79□□□□□ -0.2
TRIT1-215ENST00000541099 IRX3P78415 501 aaPredicted RBP13.79□□□□□ -0.2
TRIT1-215ENST00000541099 LACTBP83111 547 aaPredicted RBP13.79□□□□□ -0.2
TRIT1-215ENST00000541099 PABPC4Q13310 644 aaKnown RBP eCLIP13.79□□□□□ -0.2
TRIT1-215ENST00000541099 ADCK5Q3MIX3 580 aa13.79□□□□□ -0.2
TRIT1-215ENST00000541099 CASC1Q6TDU7 716 aa13.79□□□□□ -0.2
TRIT1-215ENST00000541099 LBX2Q6XYB7 198 aa13.79□□□□□ -0.2
TRIT1-215ENST00000541099 ATG4CQ96DT6 458 aa13.79□□□□□ -0.2
TRIT1-215ENST00000541099 USP26Q9BXU7 913 aa13.79□□□□□ -0.2
TRIT1-215ENST00000541099 KRT23Q9C075 422 aa13.79□□□□□ -0.2
TRIT1-215ENST00000541099 SH2D4AQ9H788 454 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms