RNA–Protein interactions for RNA: ENST00000539746.1

VTN-202, Transcript of vitronectin, humanhuman

TSL 2

Gene VTN, Length 609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-202ENST00000539746 DDIT3P35638 169 aa13.64□□□□□ -0.23
VTN-202ENST00000539746 EPS15P42566 896 aa13.64□□□□□ -0.23
VTN-202ENST00000539746 SLC1A4P43007 532 aa13.64□□□□□ -0.23
VTN-202ENST00000539746 SLC4A3P48751 1232 aa13.64□□□□□ -0.23
VTN-202ENST00000539746 ATP2B2Q01814 1243 aa13.64□□□□□ -0.23
VTN-202ENST00000539746 SLC4A8Q2Y0W8 1093 aa13.64□□□□□ -0.23
VTN-202ENST00000539746 TMTC3Q6ZXV5 915 aa13.64□□□□□ -0.23
VTN-202ENST00000539746 FAM160B2Q86V87 743 aa13.64□□□□□ -0.23
VTN-202ENST00000539746 SPRYD3Q8NCJ5 442 aa13.64□□□□□ -0.23
VTN-202ENST00000539746 ZNF396Q96N95 335 aaPredicted RBP13.64□□□□□ -0.23
VTN-202ENST00000539746 ZBTB21Q9ULJ3 1066 aa13.64□□□□□ -0.23
VTN-202ENST00000539746 VPS37CA5D8V6 355 aaPredicted RBP13.63□□□□□ -0.23
VTN-202ENST00000539746 C19orf81C9J6K1 198 aa13.63□□□□□ -0.23
VTN-202ENST00000539746 GH2P01242 217 aa13.63□□□□□ -0.23
VTN-202ENST00000539746 SYT1P21579 422 aa13.63□□□□□ -0.23
VTN-202ENST00000539746 GNA11P29992 359 aa13.63□□□□□ -0.23
VTN-202ENST00000539746 PRELPP51888 382 aa13.63□□□□□ -0.23
VTN-202ENST00000539746 SKOR2Q2VWA4 1001 aaPredicted RBP13.63□□□□□ -0.23
VTN-202ENST00000539746 NOL9Q5SY16 702 aaKnown RBP13.63□□□□□ -0.23
VTN-202ENST00000539746 PPP1R18Q6NYC8 613 aa13.63□□□□□ -0.23
VTN-202ENST00000539746 LDHDQ86WU2 507 aa13.63□□□□□ -0.23
VTN-202ENST00000539746 SCYL3Q8IZE3 742 aa13.63□□□□□ -0.23
VTN-202ENST00000539746 SLC44A5Q8NCS7 719 aa13.63□□□□□ -0.23
VTN-202ENST00000539746 SLC26A6Q9BXS9 759 aa13.63□□□□□ -0.23
VTN-202ENST00000539746 TAF1DQ9H5J8 278 aaPredicted RBP13.63□□□□□ -0.23
VTN-202ENST00000539746 IL17RBQ9NRM6 502 aa13.63□□□□□ -0.23
VTN-202ENST00000539746 HPS5Q9UPZ3 1129 aa13.63□□□□□ -0.23
VTN-202ENST00000539746 CDK5RAP2Q96SN8 1893 aa13.63□□□□□ -0.23
VTN-202ENST00000539746 KLRF2D3W0D1 207 aa13.62□□□□□ -0.23
VTN-202ENST00000539746 PLA2G6O60733 806 aa13.62□□□□□ -0.23
VTN-202ENST00000539746 BRD1O95696 1058 aa13.62□□□□□ -0.23
VTN-202ENST00000539746 BMP15O95972 392 aa13.62□□□□□ -0.23
VTN-202ENST00000539746 CCDC96Q2M329 555 aa13.62□□□□□ -0.23
VTN-202ENST00000539746 CLEC17AQ6ZS10 378 aa13.62□□□□□ -0.23
VTN-202ENST00000539746 SH3BP5LQ7L8J4 393 aa13.62□□□□□ -0.23
VTN-202ENST00000539746 TRPM4Q8TD43 1214 aa13.62□□□□□ -0.23
VTN-202ENST00000539746 ALG1Q9BT22 464 aa13.62□□□□□ -0.23
VTN-202ENST00000539746 SCAND2PQ9GZW5 306 aaPredicted RBP13.62□□□□□ -0.23
VTN-202ENST00000539746 MAF1Q9H063 256 aa13.62□□□□□ -0.23
VTN-202ENST00000539746 ZNF112Q9UJU3 913 aa13.62□□□□□ -0.23
VTN-202ENST00000539746 ISY1Q9ULR0 285 aaKnown RBP13.62□□□□□ -0.23
VTN-202ENST00000539746 CLEC11AQ9Y240 323 aa13.62□□□□□ -0.23
VTN-202ENST00000539746 TMX2Q9Y320 296 aa13.62□□□□□ -0.23
VTN-202ENST00000539746 CTDP1Q9Y5B0 961 aaPredicted RBP13.62□□□□□ -0.23
VTN-202ENST00000539746 PALM3A6NDB9 673 aaPredicted RBP13.61□□□□□ -0.23
VTN-202ENST00000539746 SNHG28P0DPA3 235 aa13.61□□□□□ -0.23
VTN-202ENST00000539746 EEF2P13639 858 aaKnown RBP13.61□□□□□ -0.23
VTN-202ENST00000539746 KRT85P78386 507 aa13.61□□□□□ -0.23
VTN-202ENST00000539746 IKQ13123 557 aaPredicted RBP13.61□□□□□ -0.23
VTN-202ENST00000539746 PABPC4Q13310 644 aaKnown RBP eCLIP13.61□□□□□ -0.23
VTN-202ENST00000539746 SLFN13Q68D06 897 aa13.61□□□□□ -0.23
VTN-202ENST00000539746 ZFPM1Q8IX07 1006 aa13.61□□□□□ -0.23
VTN-202ENST00000539746 ANKRD13AQ8IZ07 590 aa13.61□□□□□ -0.23
VTN-202ENST00000539746 FBXO18Q8NFZ0 1043 aa13.61□□□□□ -0.23
VTN-202ENST00000539746 TEPSINQ96N21 525 aa13.61□□□□□ -0.23
VTN-202ENST00000539746 WRNIP1Q96S55 665 aa13.61□□□□□ -0.23
VTN-202ENST00000539746 NAP1L4Q99733 375 aaKnown RBP13.61□□□□□ -0.23
VTN-202ENST00000539746 WDR18Q9BV38 432 aa13.61□□□□□ -0.23
VTN-202ENST00000539746 KIAA1683Q9H0B3 1180 aa13.61□□□□□ -0.23
VTN-202ENST00000539746 INCENPQ9NQS7 918 aa13.61□□□□□ -0.23
VTN-202ENST00000539746 FOXD4L1Q9NU39 408 aa13.61□□□□□ -0.23
VTN-202ENST00000539746 TMOD4Q9NZQ9 345 aa13.61□□□□□ -0.23
VTN-202ENST00000539746 FEM1BQ9UK73 627 aa13.61□□□□□ -0.23
VTN-202ENST00000539746 NOL7Q9UMY1 257 aaKnown RBP13.61□□□□□ -0.23
VTN-202ENST00000539746 CEP131Q9UPN4 1083 aa13.61□□□□□ -0.23
VTN-202ENST00000539746 WDR90Q96KV7 1748 aa13.61□□□□□ -0.23
VTN-202ENST00000539746 MYH8P13535 1937 aa13.6□□□□□ -0.23
VTN-202ENST00000539746 WDR46O15213 610 aaKnown RBP13.6□□□□□ -0.23
VTN-202ENST00000539746 LARGE1O95461 756 aa13.6□□□□□ -0.23
VTN-202ENST00000539746 PDHBP11177 359 aa13.6□□□□□ -0.23
VTN-202ENST00000539746 BMP3P12645 472 aa13.6□□□□□ -0.23
VTN-202ENST00000539746 SCG2P13521 617 aa13.6□□□□□ -0.23
VTN-202ENST00000539746 ADD1P35611 737 aaKnown RBP13.6□□□□□ -0.23
VTN-202ENST00000539746 MAP3K9P80192 1104 aa13.6□□□□□ -0.23
VTN-202ENST00000539746 ZNF543Q08ER8 600 aa13.6□□□□□ -0.23
VTN-202ENST00000539746 SEPT2Q15019 361 aa13.6□□□□□ -0.23
VTN-202ENST00000539746 EAPPQ56P03 285 aaPredicted RBP13.6□□□□□ -0.23
VTN-202ENST00000539746 JMYQ8N9B5 988 aa13.6□□□□□ -0.23
VTN-202ENST00000539746 DDX11Q96FC9 970 aa13.6□□□□□ -0.23
VTN-202ENST00000539746 FOXP1Q9H334 677 aaPredicted RBP13.6□□□□□ -0.23
VTN-202ENST00000539746 DNAJC18Q9H819 358 aa13.6□□□□□ -0.23
VTN-202ENST00000539746 NCOA5Q9HCD5 579 aaKnown RBP13.6□□□□□ -0.23
VTN-202ENST00000539746 PCDHAC2Q9Y5I4 1007 aa13.6□□□□□ -0.23
VTN-202ENST00000539746 USP17L10C9JJH3 530 aa13.59□□□□□ -0.23
VTN-202ENST00000539746 RAD21O60216 631 aa13.59□□□□□ -0.23
VTN-202ENST00000539746 F13A1P00488 732 aa13.59□□□□□ -0.23
VTN-202ENST00000539746 STAT2P52630 851 aa13.59□□□□□ -0.23
VTN-202ENST00000539746 TTLL12Q14166 644 aaPredicted RBP13.59□□□□□ -0.23
VTN-202ENST00000539746 PFKFB3Q16875 520 aaPredicted RBP13.59□□□□□ -0.23
VTN-202ENST00000539746 MCTP1Q6DN14 999 aa13.59□□□□□ -0.23
VTN-202ENST00000539746 USP17L2Q6R6M4 530 aa13.59□□□□□ -0.23
VTN-202ENST00000539746 SAMD3Q8N6K7 520 aa13.59□□□□□ -0.23
VTN-202ENST00000539746 LARP6Q9BRS8 491 aaKnown RBP13.59□□□□□ -0.23
VTN-202ENST00000539746 VCPKMTQ9H867 229 aa13.59□□□□□ -0.23
VTN-202ENST00000539746 C6orf50Q9HD87 102 aa13.59□□□□□ -0.23
VTN-202ENST00000539746 PNMA6FA0A0J9YX94 578 aa13.58□□□□□ -0.24
VTN-202ENST00000539746 PHF20L1A8MW92 1017 aa13.58□□□□□ -0.24
VTN-202ENST00000539746 F5H6K3 240 aa13.58□□□□□ -0.24
VTN-202ENST00000539746 NMT2O60551 498 aa13.58□□□□□ -0.24
VTN-202ENST00000539746 GDF11O95390 407 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms