RNA–Protein interactions for RNA: ENST00000529873.5

CTNND1-221, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,931 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-221ENST00000529873 MIER3Q7Z3K6 550 aa9.41□□□□□ -0.9
CTNND1-221ENST00000529873 SLFN12Q8IYM2 578 aa9.41□□□□□ -0.9
CTNND1-221ENST00000529873 SMC1BQ8NDV3 1235 aa9.41□□□□□ -0.9
CTNND1-221ENST00000529873 TM6SF1Q9BZW5 370 aa9.41□□□□□ -0.9
CTNND1-221ENST00000529873 RABGAP1Q9Y3P9 1069 aa9.41□□□□□ -0.9
CTNND1-221ENST00000529873 EXOC3O60645 756 aa9.4□□□□□ -0.9
CTNND1-221ENST00000529873 DLGAP5Q15398 846 aa9.4□□□□□ -0.9
CTNND1-221ENST00000529873 HERC4Q5GLZ8 1057 aaPredicted RBP9.4□□□□□ -0.9
CTNND1-221ENST00000529873 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.4□□□□□ -0.96e-14■□□□□ 9.9
CTNND1-221ENST00000529873 LSM14BQ9BX40 385 aaKnown RBP9.4□□□□□ -0.9
CTNND1-221ENST00000529873 VPS54Q9P1Q0 977 aa9.4□□□□□ -0.9
CTNND1-221ENST00000529873 SH3BP5O60239 455 aa9.4□□□□□ -0.9
CTNND1-221ENST00000529873 KDM5CP41229 1560 aa9.4□□□□□ -0.9
CTNND1-221ENST00000529873 TARBP1Q13395 1621 aaKnown RBP9.4□□□□□ -0.9
CTNND1-221ENST00000529873 KIF1BO60333 1816 aa9.4□□□□□ -0.9
CTNND1-221ENST00000529873 ADCY9O60503 1353 aa9.4□□□□□ -0.9
CTNND1-221ENST00000529873 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.4□□□□□ -0.9
CTNND1-221ENST00000529873 PLEKHG3A1L390 1219 aa9.4□□□□□ -0.9
CTNND1-221ENST00000529873 FLOT1O75955 427 aa9.4□□□□□ -0.9
CTNND1-221ENST00000529873 CFBP00751 764 aa9.4□□□□□ -0.9
CTNND1-221ENST00000529873 ZNF445P59923 1031 aa9.4□□□□□ -0.9
CTNND1-221ENST00000529873 DBN1Q16643 649 aa9.4□□□□□ -0.9
CTNND1-221ENST00000529873 ARHGEF16Q5VV41 709 aa9.4□□□□□ -0.9
CTNND1-221ENST00000529873 NELFCDQ8IXH7 590 aa9.4□□□□□ -0.9
CTNND1-221ENST00000529873 REXO1Q8N1G1 1221 aaKnown RBP9.4□□□□□ -0.9
CTNND1-221ENST00000529873 PPANQ9NQ55 473 aaKnown RBP9.4□□□□□ -0.9
CTNND1-221ENST00000529873 NDUFB9Q9Y6M9 179 aa9.4□□□□□ -0.9
CTNND1-221ENST00000529873 GADD45BO75293 160 aaPredicted RBP9.4□□□□□ -0.91
CTNND1-221ENST00000529873 MTMR3Q13615 1198 aa9.4□□□□□ -0.91
CTNND1-221ENST00000529873 BEND3Q5T5X7 828 aa9.4□□□□□ -0.91
CTNND1-221ENST00000529873 VPS52Q8N1B4 723 aa9.4□□□□□ -0.91
CTNND1-221ENST00000529873 ZBTB38Q8NAP3 1195 aaPredicted RBP9.4□□□□□ -0.91
CTNND1-221ENST00000529873 STMN2Q93045 179 aa9.4□□□□□ -0.91
CTNND1-221ENST00000529873 TEKT1Q969V4 418 aa9.4□□□□□ -0.91
CTNND1-221ENST00000529873 ZNF408Q9H9D4 720 aa9.4□□□□□ -0.91
CTNND1-221ENST00000529873 SERTAD1Q9UHV2 236 aa9.4□□□□□ -0.91
CTNND1-221ENST00000529873 VIMP08670 466 aaKnown RBP9.4□□□□□ -0.91
CTNND1-221ENST00000529873 ATP11AP98196 1134 aa9.4□□□□□ -0.91
CTNND1-221ENST00000529873 KLHL30Q0D2K2 578 aa9.4□□□□□ -0.91
CTNND1-221ENST00000529873 EFCAB6Q5THR3 1501 aa9.4□□□□□ -0.91
CTNND1-221ENST00000529873 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.4□□□□□ -0.91
CTNND1-221ENST00000529873 ATP10DQ9P241 1426 aa9.39□□□□□ -0.91
CTNND1-221ENST00000529873 ATP7BP35670 1465 aa9.39□□□□□ -0.91
CTNND1-221ENST00000529873 KRT19P08727 400 aa9.39□□□□□ -0.91
CTNND1-221ENST00000529873 B4GALNT4Q76KP1 1039 aa9.39□□□□□ -0.91
CTNND1-221ENST00000529873 PIK3R5Q8WYR1 880 aa9.39□□□□□ -0.91
CTNND1-221ENST00000529873 CCDC51Q96ER9 411 aa9.39□□□□□ -0.91
CTNND1-221ENST00000529873 CARD10Q9BWT7 1032 aa9.39□□□□□ -0.91
CTNND1-221ENST00000529873 USTQ9Y2C2 406 aa9.39□□□□□ -0.91
CTNND1-221ENST00000529873 TTC37Q6PGP7 1564 aa9.39□□□□□ -0.91
CTNND1-221ENST00000529873 PPIP5K2O43314 1243 aa9.39□□□□□ -0.91
CTNND1-221ENST00000529873 JAK2O60674 1132 aa9.39□□□□□ -0.91
CTNND1-221ENST00000529873 CEP85LQ5SZL2 805 aa9.39□□□□□ -0.91
CTNND1-221ENST00000529873 FAM102BQ5T8I3 360 aa9.39□□□□□ -0.91
CTNND1-221ENST00000529873 GALNT17Q6IS24 598 aa9.39□□□□□ -0.91
CTNND1-221ENST00000529873 IFNL3Q8IZI9 196 aa9.39□□□□□ -0.91
CTNND1-221ENST00000529873 ZNF654Q8IZM8 581 aa9.39□□□□□ -0.91
CTNND1-221ENST00000529873 CHURC1Q8WUH1 139 aa9.39□□□□□ -0.91
CTNND1-221ENST00000529873 NSMCE1Q8WV22 266 aa9.39□□□□□ -0.91
CTNND1-221ENST00000529873 HAUS7Q99871 368 aa9.39□□□□□ -0.91
CTNND1-221ENST00000529873 GIGYF1O75420 1035 aaPredicted RBP9.39□□□□□ -0.91
CTNND1-221ENST00000529873 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.39□□□□□ -0.915e-6■■■□□ 17.3
CTNND1-221ENST00000529873 PARP2Q9UGN5 583 aa9.39□□□□□ -0.91
CTNND1-221ENST00000529873 FRMPD2Q68DX3 1309 aaPredicted RBP9.39□□□□□ -0.91
CTNND1-221ENST00000529873 ARHGAP6O43182 974 aa9.39□□□□□ -0.91
CTNND1-221ENST00000529873 APBA3O96018 575 aa9.39□□□□□ -0.91
CTNND1-221ENST00000529873 ME3Q16798 604 aa9.39□□□□□ -0.91
CTNND1-221ENST00000529873 TPH2Q8IWU9 490 aa9.39□□□□□ -0.91
CTNND1-221ENST00000529873 BLIDQ8IZY5 108 aa9.39□□□□□ -0.91
CTNND1-221ENST00000529873 A6NNZ2 444 aa9.38□□□□□ -0.91
CTNND1-221ENST00000529873 PFKFB2O60825 505 aa9.38□□□□□ -0.91
CTNND1-221ENST00000529873 GAS7O60861 476 aa9.38□□□□□ -0.91
CTNND1-221ENST00000529873 HPDP32754 393 aaPredicted RBP9.38□□□□□ -0.91
CTNND1-221ENST00000529873 MAP2K2P36507 400 aa9.38□□□□□ -0.91
CTNND1-221ENST00000529873 TUBB8Q3ZCM7 444 aa9.38□□□□□ -0.91
CTNND1-221ENST00000529873 CFAP221Q4G0U5 840 aa9.38□□□□□ -0.91
CTNND1-221ENST00000529873 DCUN1D2Q6PH85 259 aa9.38□□□□□ -0.91
CTNND1-221ENST00000529873 SRGAP1Q7Z6B7 1085 aa9.38□□□□□ -0.91
CTNND1-221ENST00000529873 GPBP1Q86WP2 473 aa9.38□□□□□ -0.91
CTNND1-221ENST00000529873 DDX17Q92841 729 aaKnown RBP9.38□□□□□ -0.91
CTNND1-221ENST00000529873 ZNF496Q96IT1 587 aaPredicted RBP9.38□□□□□ -0.91
CTNND1-221ENST00000529873 POLR2MP0CAP2 368 aa9.38□□□□□ -0.91
CTNND1-221ENST00000529873 GBP1P32455 592 aa9.38□□□□□ -0.91
CTNND1-221ENST00000529873 MTX1Q13505 466 aa9.38□□□□□ -0.91
CTNND1-221ENST00000529873 MORC3Q14149 939 aa9.38□□□□□ -0.91
CTNND1-221ENST00000529873 GEN1Q17RS7 908 aa9.38□□□□□ -0.91
CTNND1-221ENST00000529873 CCDC125Q86Z20 511 aa9.38□□□□□ -0.91
CTNND1-221ENST00000529873 FLAD1Q8NFF5 587 aa9.38□□□□□ -0.91
CTNND1-221ENST00000529873 IWS1Q96ST2 819 aa9.38□□□□□ -0.91
CTNND1-221ENST00000529873 SLC5A4Q9NY91 659 aa9.38□□□□□ -0.91
CTNND1-221ENST00000529873 RNASE9P60153 205 aaKnown RBP9.38□□□□□ -0.91
CTNND1-221ENST00000529873 GABPAQ06546 454 aa9.38□□□□□ -0.91
CTNND1-221ENST00000529873 ZBTB17Q13105 803 aa9.38□□□□□ -0.91
CTNND1-221ENST00000529873 MCF2L2Q86YR7 1114 aa9.38□□□□□ -0.91
CTNND1-221ENST00000529873 HACE1Q8IYU2 909 aa9.38□□□□□ -0.91
CTNND1-221ENST00000529873 SEPT10Q9P0V9 454 aa9.38□□□□□ -0.91
CTNND1-221ENST00000529873 MRPL11Q9Y3B7 192 aaKnown RBP9.38□□□□□ -0.91
CTNND1-221ENST00000529873 TTC36A6NLP5 189 aa9.38□□□□□ -0.91
CTNND1-221ENST00000529873 KCNJ18B7U540 433 aa9.38□□□□□ -0.91
CTNND1-221ENST00000529873 CEP104O60308 925 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms