RNA–Protein interactions for RNA: ENST00000527467.5

CTNND1-216, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-216ENST00000527467 POLR3CQ9BUI4 534 aaPredicted RBP8.01□□□□□ -1.13
CTNND1-216ENST00000527467 SH2D4AQ9H788 454 aa8.01□□□□□ -1.13
CTNND1-216ENST00000527467 TXLNGQ9NUQ3 528 aa8.01□□□□□ -1.13
CTNND1-216ENST00000527467 HACL1Q9UJ83 578 aa8.01□□□□□ -1.13
CTNND1-216ENST00000527467 ROBO2Q9HCK4 1378 aa8.01□□□□□ -1.13
CTNND1-216ENST00000527467 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.01□□□□□ -1.13
CTNND1-216ENST00000527467 LOC102724428A0A0B4J2F2 783 aa8.01□□□□□ -1.13
CTNND1-216ENST00000527467 MINDY4BA8MYZ0 360 aa8.01□□□□□ -1.13
CTNND1-216ENST00000527467 RANBP1P43487 201 aa8.01□□□□□ -1.13
CTNND1-216ENST00000527467 SIK1P57059 783 aa8.01□□□□□ -1.13
CTNND1-216ENST00000527467 FAM186BQ8IYM0 893 aa8.01□□□□□ -1.13
CTNND1-216ENST00000527467 KCNG4Q8TDN1 519 aa8.01□□□□□ -1.13
CTNND1-216ENST00000527467 STMN3Q9NZ72 180 aa8.01□□□□□ -1.13
CTNND1-216ENST00000527467 MAST3O60307 1309 aa8.01□□□□□ -1.13
CTNND1-216ENST00000527467 B4DLN1 442 aa8.01□□□□□ -1.13
CTNND1-216ENST00000527467 SLC4A1P02730 911 aa8.01□□□□□ -1.13
CTNND1-216ENST00000527467 MMP10P09238 476 aa8.01□□□□□ -1.13
CTNND1-216ENST00000527467 IFIT1P09914 478 aaKnown RBP8.01□□□□□ -1.13
CTNND1-216ENST00000527467 PSMD7P51665 324 aa8.01□□□□□ -1.13
CTNND1-216ENST00000527467 MRPL12P52815 198 aaKnown RBP8.01□□□□□ -1.13
CTNND1-216ENST00000527467 ZNF444Q8N0Y2 327 aaPredicted RBP8.01□□□□□ -1.13
CTNND1-216ENST00000527467 P3H4Q92791 437 aa8.01□□□□□ -1.13
CTNND1-216ENST00000527467 HOMER3Q9NSC5 361 aa8.01□□□□□ -1.13
CTNND1-216ENST00000527467 IRAK4Q9NWZ3 460 aa8.01□□□□□ -1.13
CTNND1-216ENST00000527467 IFIT3O14879 490 aaKnown RBP8□□□□□ -1.13
CTNND1-216ENST00000527467 STAT6P42226 847 aa8□□□□□ -1.13
CTNND1-216ENST00000527467 C16orf87Q6PH81 154 aa8□□□□□ -1.13
CTNND1-216ENST00000527467 ZGPATQ8N5A5 531 aaKnown RBP8□□□□□ -1.13
CTNND1-216ENST00000527467 SAAL1Q96ER3 474 aa8□□□□□ -1.13
CTNND1-216ENST00000527467 TBC1D2Q9BYX2 928 aa8□□□□□ -1.13
CTNND1-216ENST00000527467 PPANQ9NQ55 473 aaKnown RBP8□□□□□ -1.13
CTNND1-216ENST00000527467 SAMM50Q9Y512 469 aa8□□□□□ -1.13
CTNND1-216ENST00000527467 INO80Q9ULG1 1556 aaPredicted RBP8□□□□□ -1.13
CTNND1-216ENST00000527467 PLEKHG2Q9H7P9 1386 aa8□□□□□ -1.13
CTNND1-216ENST00000527467 MAFGO15525 162 aa8□□□□□ -1.13
CTNND1-216ENST00000527467 CCT6AP40227 531 aaKnown RBP8□□□□□ -1.13
CTNND1-216ENST00000527467 KRT71Q3SY84 523 aa8□□□□□ -1.13
CTNND1-216ENST00000527467 CTAGE3PQ8IX95 158 aa8□□□□□ -1.13
CTNND1-216ENST00000527467 CEP70Q8NHQ1 597 aa8□□□□□ -1.13
CTNND1-216ENST00000527467 MRPS27Q92552 414 aaKnown RBP8□□□□□ -1.13
CTNND1-216ENST00000527467 IL1RAPL2Q9NP60 686 aa8□□□□□ -1.13
CTNND1-216ENST00000527467 TEKT2Q9UIF3 430 aa8□□□□□ -1.13
CTNND1-216ENST00000527467 AGTPBP1Q9UPW5 1226 aa8□□□□□ -1.13
CTNND1-216ENST00000527467 SPOPO43791 374 aa8□□□□□ -1.13
CTNND1-216ENST00000527467 GNGT1P63211 74 aa8□□□□□ -1.13
CTNND1-216ENST00000527467 MRPS15P82914 257 aaKnown RBP8□□□□□ -1.13
CTNND1-216ENST00000527467 BIRC2Q13490 618 aa8□□□□□ -1.13
CTNND1-216ENST00000527467 PDXDC1Q6P996 788 aa8□□□□□ -1.13
CTNND1-216ENST00000527467 MED4Q9NPJ6 270 aa8□□□□□ -1.13
CTNND1-216ENST00000527467 DDX41Q9UJV9 622 aaKnown RBP8□□□□□ -1.13
CTNND1-216ENST00000527467 CSADQ9Y600 493 aa8□□□□□ -1.13
CTNND1-216ENST00000527467 SLIT1O75093 1534 aa8□□□□□ -1.13
CTNND1-216ENST00000527467 MYL6BP14649 208 aa8□□□□□ -1.13
CTNND1-216ENST00000527467 UBXN1Q04323 297 aa8□□□□□ -1.13
CTNND1-216ENST00000527467 GOLGA5Q8TBA6 731 aa8□□□□□ -1.13
CTNND1-216ENST00000527467 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8□□□□□ -1.13
CTNND1-216ENST00000527467 NBPF3Q9H094 633 aa8□□□□□ -1.13
CTNND1-216ENST00000527467 RBSNQ9H1K0 784 aa8□□□□□ -1.13
CTNND1-216ENST00000527467 TTF2Q9UNY4 1162 aaKnown RBP8□□□□□ -1.13
CTNND1-216ENST00000527467 CDC42BPGQ6DT37 1551 aa7.99□□□□□ -1.13
CTNND1-216ENST00000527467 ZNF213O14771 459 aa7.99□□□□□ -1.13
CTNND1-216ENST00000527467 HMGB3O15347 200 aaKnown RBP7.99□□□□□ -1.13
CTNND1-216ENST00000527467 RANBP6O60518 1105 aaKnown RBP7.99□□□□□ -1.13
CTNND1-216ENST00000527467 AFMP43652 599 aa7.99□□□□□ -1.13
CTNND1-216ENST00000527467 SLC12A2P55011 1212 aa7.99□□□□□ -1.13
CTNND1-216ENST00000527467 IL1RL1Q01638 556 aa7.99□□□□□ -1.13
CTNND1-216ENST00000527467 HSP90AA4PQ58FG1 418 aa7.99□□□□□ -1.13
CTNND1-216ENST00000527467 FAM182BQ5T319 152 aa7.99□□□□□ -1.13
CTNND1-216ENST00000527467 RBM26Q5T8P6 1007 aaKnown RBP7.99□□□□□ -1.13
CTNND1-216ENST00000527467 KRT80Q6KB66 452 aa7.99□□□□□ -1.13
CTNND1-216ENST00000527467 ZNF449Q6P9G9 518 aa7.99□□□□□ -1.13
CTNND1-216ENST00000527467 ST13P4Q8IZP2 240 aaPredicted RBP7.99□□□□□ -1.13
CTNND1-216ENST00000527467 EVI5LQ96CN4 794 aa7.99□□□□□ -1.13
CTNND1-216ENST00000527467 KIFC3Q9BVG8 833 aa7.99□□□□□ -1.13
CTNND1-216ENST00000527467 DNAJC25Q9H1X3 360 aa7.99□□□□□ -1.13
CTNND1-216ENST00000527467 DDX28Q9NUL7 540 aaKnown RBP7.99□□□□□ -1.13
CTNND1-216ENST00000527467 ORC3Q9UBD5 711 aaPredicted RBP7.99□□□□□ -1.13
CTNND1-216ENST00000527467 USP16Q9Y5T5 823 aa7.99□□□□□ -1.13
CTNND1-216ENST00000527467 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.99□□□□□ -1.13
CTNND1-216ENST00000527467 MAN1A1P33908 653 aa7.99□□□□□ -1.13
CTNND1-216ENST00000527467 ILDR2Q71H61 639 aa7.99□□□□□ -1.13
CTNND1-216ENST00000527467 EFHD1Q9BUP0 239 aa7.99□□□□□ -1.13
CTNND1-216ENST00000527467 KRT82Q9NSB4 513 aa7.99□□□□□ -1.13
CTNND1-216ENST00000527467 ATG3Q9NT62 314 aa7.99□□□□□ -1.13
CTNND1-216ENST00000527467 ASIC3Q9UHC3 531 aa7.99□□□□□ -1.13
CTNND1-216ENST00000527467 SART1O43290 800 aaKnown RBP7.99□□□□□ -1.13
CTNND1-216ENST00000527467 BCAR3O75815 825 aa7.99□□□□□ -1.13
CTNND1-216ENST00000527467 GSTO1P78417 241 aa7.99□□□□□ -1.13
CTNND1-216ENST00000527467 PPP2R5CQ13362 524 aa7.99□□□□□ -1.13
CTNND1-216ENST00000527467 TEX9Q8N6V9 391 aa7.99□□□□□ -1.13
CTNND1-216ENST00000527467 UBL4BQ8N7F7 174 aa7.99□□□□□ -1.13
CTNND1-216ENST00000527467 N4BP2L2Q92802 583 aaPredicted RBP7.99□□□□□ -1.13
CTNND1-216ENST00000527467 KIF1BPQ96EK5 621 aa7.99□□□□□ -1.13
CTNND1-216ENST00000527467 EPS15L1Q9UBC2 864 aa7.99□□□□□ -1.13
CTNND1-216ENST00000527467 ABCF2Q9UG63 623 aa7.99□□□□□ -1.13
CTNND1-216ENST00000527467 KIF24Q5T7B8 1368 aa7.99□□□□□ -1.13
CTNND1-216ENST00000527467 GOLGA8QA0A0J9YX86 632 aa7.99□□□□□ -1.13
CTNND1-216ENST00000527467 GOLGA8OA6NCC3 632 aa7.99□□□□□ -1.13
CTNND1-216ENST00000527467 GOLGA8NF8WBI6 632 aa7.99□□□□□ -1.13
CTNND1-216ENST00000527467 H0YC42 278 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms