RNA–Protein interactions for RNA: ENST00000521578.5

PTP4A3-204, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTP4A3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-204ENST00000521578 OTUD5Q96G74 571 aa25.74■■□□□ 1.71
PTP4A3-204ENST00000521578 USP17L5A8MUK1 530 aa25.73■■□□□ 1.71
PTP4A3-204ENST00000521578 EXOSC10Q01780 885 aaKnown RBP25.73■■□□□ 1.71
PTP4A3-204ENST00000521578 RGMBQ6NW40 437 aa25.73■■□□□ 1.71
PTP4A3-204ENST00000521578 Q6ZUG5 572 aa25.73■■□□□ 1.71
PTP4A3-204ENST00000521578 ERO1BQ86YB8 467 aa25.73■■□□□ 1.71
PTP4A3-204ENST00000521578 MB21D2Q8IYB1 491 aaPredicted RBP25.73■■□□□ 1.71
PTP4A3-204ENST00000521578 CEP95Q96GE4 821 aa25.73■■□□□ 1.71
PTP4A3-204ENST00000521578 IL17RBQ9NRM6 502 aa25.73■■□□□ 1.71
PTP4A3-204ENST00000521578 PLIN4Q96Q06 1357 aa25.72■■□□□ 1.71
PTP4A3-204ENST00000521578 SPDYE5A6NIY4 337 aa25.72■■□□□ 1.71
PTP4A3-204ENST00000521578 PDCP20941 246 aa25.72■■□□□ 1.71
PTP4A3-204ENST00000521578 ATP2B2Q01814 1243 aa25.72■■□□□ 1.71
PTP4A3-204ENST00000521578 MKRN3Q13064 507 aaKnown RBP25.72■■□□□ 1.71
PTP4A3-204ENST00000521578 ZSCAN23Q3MJ62 389 aa25.72■■□□□ 1.71
PTP4A3-204ENST00000521578 PAXIP1Q6ZW49 1069 aaPredicted RBP25.72■■□□□ 1.71
PTP4A3-204ENST00000521578 GREB1LQ9C091 1923 aaPredicted RBP25.72■■□□□ 1.71
PTP4A3-204ENST00000521578 ICA1Q05084 483 aa25.71■■□□□ 1.71
PTP4A3-204ENST00000521578 AGXT2Q9BYV1 514 aa25.71■■□□□ 1.71
PTP4A3-204ENST00000521578 KANSL2Q9H9L4 492 aa25.71■■□□□ 1.71
PTP4A3-204ENST00000521578 IGKV6D-41A0A0C4DH26 115 aa25.71■■□□□ 1.71
PTP4A3-204ENST00000521578 IQCA1Q86XH1 822 aa25.71■■□□□ 1.71
PTP4A3-204ENST00000521578 GTF3C6Q969F1 213 aa25.71■■□□□ 1.71
PTP4A3-204ENST00000521578 GJA5P36382 358 aa25.7■■□□□ 1.7
PTP4A3-204ENST00000521578 NT5C2P49902 561 aa25.7■■□□□ 1.7
PTP4A3-204ENST00000521578 ANTXR2P58335 489 aa25.7■■□□□ 1.7
PTP4A3-204ENST00000521578 PPATQ06203 517 aa25.7■■□□□ 1.7
PTP4A3-204ENST00000521578 GRM1Q13255 1194 aa25.7■■□□□ 1.7
PTP4A3-204ENST00000521578 RASAL3Q86YV0 1011 aa25.7■■□□□ 1.7
PTP4A3-204ENST00000521578 WNK4Q96J92 1243 aa25.7■■□□□ 1.7
PTP4A3-204ENST00000521578 MTMR4Q9NYA4 1195 aa25.7■■□□□ 1.7
PTP4A3-204ENST00000521578 PHIPQ8WWQ0 1821 aa25.7■■□□□ 1.7
PTP4A3-204ENST00000521578 TRIM75PA6NK02 468 aa25.69■■□□□ 1.7
PTP4A3-204ENST00000521578 IRF6O14896 467 aa25.69■■□□□ 1.7
PTP4A3-204ENST00000521578 EEF2P13639 858 aaKnown RBP25.69■■□□□ 1.7
PTP4A3-204ENST00000521578 HSPA6P17066 643 aa25.69■■□□□ 1.7
PTP4A3-204ENST00000521578 MCM5P33992 734 aa25.69■■□□□ 1.7
PTP4A3-204ENST00000521578 SPP2Q13103 211 aa25.69■■□□□ 1.7
PTP4A3-204ENST00000521578 DEFB115Q30KQ5 88 aa25.69■■□□□ 1.7
PTP4A3-204ENST00000521578 LARP1BQ659C4 914 aaKnown RBP25.69■■□□□ 1.7
PTP4A3-204ENST00000521578 SIAH1Q8IUQ4 282 aa25.69■■□□□ 1.7
PTP4A3-204ENST00000521578 FBXL16Q8N461 479 aa25.69■■□□□ 1.7
PTP4A3-204ENST00000521578 ACER1Q8TDN7 264 aa25.69■■□□□ 1.7
PTP4A3-204ENST00000521578 UBAC1Q9BSL1 405 aa25.69■■□□□ 1.7
PTP4A3-204ENST00000521578 TCP11L1Q9NUJ3 509 aa25.69■■□□□ 1.7
PTP4A3-204ENST00000521578 STX8Q9UNK0 236 aa25.69■■□□□ 1.7
PTP4A3-204ENST00000521578 PRC1O43663 620 aa25.68■■□□□ 1.7
PTP4A3-204ENST00000521578 CYP4F22Q6NT55 531 aa25.68■■□□□ 1.7
PTP4A3-204ENST00000521578 ZNF280CQ8ND82 737 aa25.68■■□□□ 1.7
PTP4A3-204ENST00000521578 HHIPL1Q96JK4 782 aa25.68■■□□□ 1.7
PTP4A3-204ENST00000521578 ZSCAN10Q96SZ4 725 aaPredicted RBP25.68■■□□□ 1.7
PTP4A3-204ENST00000521578 AS3MTQ9HBK9 375 aa25.68■■□□□ 1.7
PTP4A3-204ENST00000521578 CLIP2Q9UDT6 1046 aa25.68■■□□□ 1.7
PTP4A3-204ENST00000521578 AFG3L2Q9Y4W6 797 aa25.68■■□□□ 1.7
PTP4A3-204ENST00000521578 RASSF10A6NK89 507 aa25.68■■□□□ 1.7
PTP4A3-204ENST00000521578 ECE1P42892 770 aa25.68■■□□□ 1.7
PTP4A3-204ENST00000521578 PPIL2Q13356 520 aa25.68■■□□□ 1.7
PTP4A3-204ENST00000521578 LRRC2Q9BYS8 371 aa25.68■■□□□ 1.7
PTP4A3-204ENST00000521578 A0A1W2PRG0 241 aa25.67■■□□□ 1.7
PTP4A3-204ENST00000521578 TTLL1O95922 423 aa25.67■■□□□ 1.7
PTP4A3-204ENST00000521578 SPRYD7Q5W111 196 aa25.67■■□□□ 1.7
PTP4A3-204ENST00000521578 WDR18Q9BV38 432 aa25.67■■□□□ 1.7
PTP4A3-204ENST00000521578 TMEM63CQ9P1W3 806 aa25.67■■□□□ 1.7
PTP4A3-204ENST00000521578 TNKSO95271 1327 aa25.67■■□□□ 1.7
PTP4A3-204ENST00000521578 IFIT3O14879 490 aaKnown RBP25.66■■□□□ 1.7
PTP4A3-204ENST00000521578 PFKFB2O60825 505 aa25.66■■□□□ 1.7
PTP4A3-204ENST00000521578 ENAHQ8N8S7 591 aaPredicted RBP25.66■■□□□ 1.7
PTP4A3-204ENST00000521578 BRF1Q92994 677 aa25.66■■□□□ 1.7
PTP4A3-204ENST00000521578 FEZ1Q99689 392 aa25.66■■□□□ 1.7
PTP4A3-204ENST00000521578 PANK2Q9BZ23 570 aa25.66■■□□□ 1.7
PTP4A3-204ENST00000521578 ARHGEF10LQ9HCE6 1279 aa25.66■■□□□ 1.7
PTP4A3-204ENST00000521578 RBM27Q9P2N5 1060 aaKnown RBP25.66■■□□□ 1.7
PTP4A3-204ENST00000521578 SLC10A3P09131 477 aa25.66■■□□□ 1.7
PTP4A3-204ENST00000521578 ZYXQ15942 572 aaKnown RBP25.66■■□□□ 1.7
PTP4A3-204ENST00000521578 RCSD1Q6JBY9 416 aa25.66■■□□□ 1.7
PTP4A3-204ENST00000521578 CCDC102AQ96A19 550 aa25.66■■□□□ 1.7
PTP4A3-204ENST00000521578 LLPHQ9BRT6 129 aaKnown RBP25.66■■□□□ 1.7
PTP4A3-204ENST00000521578 GPHNQ9NQX3 736 aaPredicted RBP25.66■■□□□ 1.7
PTP4A3-204ENST00000521578 NYAP2Q9P242 653 aa25.66■■□□□ 1.7
PTP4A3-204ENST00000521578 CNPY2Q9Y2B0 182 aa25.66■■□□□ 1.7
PTP4A3-204ENST00000521578 MYH4Q9Y623 1939 aa25.65■■□□□ 1.7
PTP4A3-204ENST00000521578 FAM155AB1AL88 458 aaPredicted RBP25.65■■□□□ 1.7
PTP4A3-204ENST00000521578 FGD1P98174 961 aa25.65■■□□□ 1.7
PTP4A3-204ENST00000521578 STK3Q13188 491 aa25.65■■□□□ 1.7
PTP4A3-204ENST00000521578 MTMR2Q13614 643 aa25.65■■□□□ 1.7
PTP4A3-204ENST00000521578 FOXD4L6Q3SYB3 417 aaPredicted RBP25.65■■□□□ 1.7
PTP4A3-204ENST00000521578 FOXD4L3Q6VB84 417 aaPredicted RBP25.65■■□□□ 1.7
PTP4A3-204ENST00000521578 ERICH2A1L162 156 aa25.64■■□□□ 1.7
PTP4A3-204ENST00000521578 USP17L10C9JJH3 530 aa25.64■■□□□ 1.7
PTP4A3-204ENST00000521578 ZBTB48P10074 688 aaPredicted RBP25.64■■□□□ 1.7
PTP4A3-204ENST00000521578 DGKZQ13574 1117 aa25.64■■□□□ 1.7
PTP4A3-204ENST00000521578 SART3Q15020 963 aaKnown RBP25.64■■□□□ 1.7
PTP4A3-204ENST00000521578 CCDC178Q5BJE1 867 aa25.64■■□□□ 1.7
PTP4A3-204ENST00000521578 TMEM67Q5HYA8 995 aa25.64■■□□□ 1.7
PTP4A3-204ENST00000521578 LRRC47Q8N1G4 583 aaKnown RBP25.64■■□□□ 1.7
PTP4A3-204ENST00000521578 CAPNS2Q96L46 248 aa25.64■■□□□ 1.7
PTP4A3-204ENST00000521578 GDPD2Q9HCC8 539 aa25.64■■□□□ 1.7
PTP4A3-204ENST00000521578 VPS37CA5D8V6 355 aaPredicted RBP25.63■■□□□ 1.69
PTP4A3-204ENST00000521578 GADD45BO75293 160 aaPredicted RBP25.63■■□□□ 1.69
PTP4A3-204ENST00000521578 BACE1P56817 501 aa25.63■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms