RNA–Protein interactions for RNA: ENST00000518919.1

CTNNA1-212, Transcript of catenin alpha 1, humanhuman

TSL 1 (best)

Gene CTNNA1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-212ENST00000518919 CACNA2D2Q9NY47 1150 aa6.3□□□□□ -1.4
CTNNA1-212ENST00000518919 GGA1Q9UJY5 639 aa6.3□□□□□ -1.4
CTNNA1-212ENST00000518919 PRKAB1Q9Y478 270 aa6.3□□□□□ -1.4
CTNNA1-212ENST00000518919 PPME1Q9Y570 386 aa6.3□□□□□ -1.4
CTNNA1-212ENST00000518919 COL4A3BPQ9Y5P4 624 aa6.3□□□□□ -1.4
CTNNA1-212ENST00000518919 BLMP54132 1417 aaPredicted RBP6.3□□□□□ -1.4
CTNNA1-212ENST00000518919 SMG6Q86US8 1419 aaKnown RBP6.3□□□□□ -1.4
CTNNA1-212ENST00000518919 ARHGEF28Q8N1W1 1705 aaKnown RBP6.3□□□□□ -1.4
CTNNA1-212ENST00000518919 NPC1L1Q9UHC9 1359 aa6.3□□□□□ -1.4
CTNNA1-212ENST00000518919 CLTCQ00610 1675 aaKnown RBP6.3□□□□□ -1.4
CTNNA1-212ENST00000518919 CENPJQ9HC77 1338 aaPredicted RBP6.29□□□□□ -1.4
CTNNA1-212ENST00000518919 CFAP65Q6ZU64 1925 aaKnown RBP6.29□□□□□ -1.4
CTNNA1-212ENST00000518919 LINC01387J3KSC0 135 aa6.29□□□□□ -1.4
CTNNA1-212ENST00000518919 PPP1R12AO14974 1030 aaPredicted RBP6.29□□□□□ -1.4
CTNNA1-212ENST00000518919 ECEL1O95672 775 aa6.29□□□□□ -1.4
CTNNA1-212ENST00000518919 MAOBP27338 520 aa6.29□□□□□ -1.4
CTNNA1-212ENST00000518919 IDI1Q13907 227 aa6.29□□□□□ -1.4
CTNNA1-212ENST00000518919 C2orf27AQ580R0 203 aa6.29□□□□□ -1.4
CTNNA1-212ENST00000518919 CC2D1BQ5T0F9 858 aaKnown RBP6.29□□□□□ -1.4
CTNNA1-212ENST00000518919 OVOS1Q6IE37 1185 aa6.29□□□□□ -1.4
CTNNA1-212ENST00000518919 FAM178BQ8IXR5 827 aa6.29□□□□□ -1.4
CTNNA1-212ENST00000518919 ZSCAN1Q8NBB4 408 aa6.29□□□□□ -1.4
CTNNA1-212ENST00000518919 CCDC86Q9H6F5 360 aaKnown RBP6.29□□□□□ -1.4
CTNNA1-212ENST00000518919 SPC25Q9HBM1 224 aa6.29□□□□□ -1.4
CTNNA1-212ENST00000518919 IFT57Q9NWB7 429 aa6.29□□□□□ -1.4
CTNNA1-212ENST00000518919 TMEM260Q9NX78 707 aa6.29□□□□□ -1.4
CTNNA1-212ENST00000518919 GMIPQ9P107 970 aa6.29□□□□□ -1.4
CTNNA1-212ENST00000518919 REV1Q9UBZ9 1251 aa6.29□□□□□ -1.4
CTNNA1-212ENST00000518919 PFDN2Q9UHV9 154 aa6.29□□□□□ -1.4
CTNNA1-212ENST00000518919 NOP58Q9Y2X3 529 aaKnown RBP6.29□□□□□ -1.4
CTNNA1-212ENST00000518919 CORINQ9Y5Q5 1042 aa6.29□□□□□ -1.4
CTNNA1-212ENST00000518919 SLC12A7Q9Y666 1083 aa6.29□□□□□ -1.4
CTNNA1-212ENST00000518919 SNCAIPQ9Y6H5 919 aa6.29□□□□□ -1.4
CTNNA1-212ENST00000518919 MYO5BQ9ULV0 1848 aa6.29□□□□□ -1.4
CTNNA1-212ENST00000518919 INSRP06213 1382 aa6.29□□□□□ -1.4
CTNNA1-212ENST00000518919 A2ML1A8K2U0 1454 aa6.28□□□□□ -1.4
CTNNA1-212ENST00000518919 PRR36Q9H6K5 1346 aa6.28□□□□□ -1.4
CTNNA1-212ENST00000518919 GFRA2O00451 464 aa6.28□□□□□ -1.4
CTNNA1-212ENST00000518919 PLCG1P19174 1290 aa6.28□□□□□ -1.4
CTNNA1-212ENST00000518919 PDE4BQ07343 736 aa6.28□□□□□ -1.4
CTNNA1-212ENST00000518919 SSRP1Q08945 709 aaKnown RBP6.28□□□□□ -1.4
CTNNA1-212ENST00000518919 INPP5AQ14642 412 aa6.28□□□□□ -1.4
CTNNA1-212ENST00000518919 GRIK5Q16478 980 aa6.28□□□□□ -1.4
CTNNA1-212ENST00000518919 ARSHQ5FYA8 562 aa6.28□□□□□ -1.4
CTNNA1-212ENST00000518919 SLCO4C1Q6ZQN7 724 aa6.28□□□□□ -1.4
CTNNA1-212ENST00000518919 TAB3Q8N5C8 712 aaPredicted RBP6.28□□□□□ -1.4
CTNNA1-212ENST00000518919 GOLGA6L1Q8N7Z2 621 aa6.28□□□□□ -1.4
CTNNA1-212ENST00000518919 THAP3Q8WTV1 239 aaPredicted RBP6.28□□□□□ -1.4
CTNNA1-212ENST00000518919 CARD10Q9BWT7 1032 aa6.28□□□□□ -1.4
CTNNA1-212ENST00000518919 USP26Q9BXU7 913 aa6.28□□□□□ -1.4
CTNNA1-212ENST00000518919 NRSN2Q9GZP1 204 aa6.28□□□□□ -1.4
CTNNA1-212ENST00000518919 OSGEPQ9NPF4 335 aa6.28□□□□□ -1.4
CTNNA1-212ENST00000518919 SLC52A1Q9NWF4 448 aa6.28□□□□□ -1.4
CTNNA1-212ENST00000518919 PTPRMP28827 1452 aa6.28□□□□□ -1.4
CTNNA1-212ENST00000518919 KDM2BQ8NHM5 1336 aa6.27□□□□□ -1.41
CTNNA1-212ENST00000518919 PRAMEF27A3QJZ7 478 aa6.27□□□□□ -1.41
CTNNA1-212ENST00000518919 FSCN2O14926 492 aa6.27□□□□□ -1.41
CTNNA1-212ENST00000518919 DIAPH1O60610 1272 aaKnown RBP6.27□□□□□ -1.41
CTNNA1-212ENST00000518919 ALBP02768 609 aa6.27□□□□□ -1.41
CTNNA1-212ENST00000518919 BAG6P46379 1132 aa6.27□□□□□ -1.41
CTNNA1-212ENST00000518919 SQSTM1Q13501 440 aa6.27□□□□□ -1.41
CTNNA1-212ENST00000518919 HP1BP3Q5SSJ5 553 aaPredicted RBP6.27□□□□□ -1.41
CTNNA1-212ENST00000518919 TMEM132EQ6IEE7 984 aa6.27□□□□□ -1.41
CTNNA1-212ENST00000518919 MRM1Q6IN84 353 aaKnown RBP6.27□□□□□ -1.41
CTNNA1-212ENST00000518919 C16orf86Q6ZW13 317 aa6.27□□□□□ -1.41
CTNNA1-212ENST00000518919 WFDC8Q8IUA0 241 aa6.27□□□□□ -1.41
CTNNA1-212ENST00000518919 ST13P5Q8NFI4 369 aaPredicted RBP6.27□□□□□ -1.41
CTNNA1-212ENST00000518919 FEZ1Q99689 392 aa6.27□□□□□ -1.41
CTNNA1-212ENST00000518919 TMX1Q9H3N1 280 aa6.27□□□□□ -1.41
CTNNA1-212ENST00000518919 KLHL3Q9UH77 587 aa6.27□□□□□ -1.41
CTNNA1-212ENST00000518919 GDF2Q9UK05 429 aaPredicted RBP6.27□□□□□ -1.41
CTNNA1-212ENST00000518919 LEMD3Q9Y2U8 911 aa6.27□□□□□ -1.41
CTNNA1-212ENST00000518919 STARD13Q9Y3M8 1113 aa6.27□□□□□ -1.41
CTNNA1-212ENST00000518919 USP32Q8NFA0 1604 aa6.27□□□□□ -1.41
CTNNA1-212ENST00000518919 SETD1AO15047 1707 aaKnown RBP6.26□□□□□ -1.41
CTNNA1-212ENST00000518919 DCDC2CA8MYV0 355 aa6.26□□□□□ -1.41
CTNNA1-212ENST00000518919 UPK3BL1B0FP48 263 aa6.26□□□□□ -1.41
CTNNA1-212ENST00000518919 UPK3BL2E5RIL1 263 aa6.26□□□□□ -1.41
CTNNA1-212ENST00000518919 ZNF862O60290 1169 aa6.26□□□□□ -1.41
CTNNA1-212ENST00000518919 LILRB5O75023 590 aa6.26□□□□□ -1.41
CTNNA1-212ENST00000518919 RAB11FIP3O75154 756 aa6.26□□□□□ -1.41
CTNNA1-212ENST00000518919 LIG1P18858 919 aa6.26□□□□□ -1.41
CTNNA1-212ENST00000518919 NCAPHQ15003 741 aa6.26□□□□□ -1.41
CTNNA1-212ENST00000518919 VHLLQ6RSH7 139 aa6.26□□□□□ -1.41
CTNNA1-212ENST00000518919 SPATC1Q76KD6 591 aa6.26□□□□□ -1.41
CTNNA1-212ENST00000518919 EEPD1Q7L9B9 569 aa6.26□□□□□ -1.41
CTNNA1-212ENST00000518919 NLRC3Q7RTR2 1065 aa6.26□□□□□ -1.41
CTNNA1-212ENST00000518919 KIAA0907Q7Z7F0 614 aaPredicted RBP6.26□□□□□ -1.41
CTNNA1-212ENST00000518919 PHAXQ9H814 394 aaKnown RBP6.26□□□□□ -1.41
CTNNA1-212ENST00000518919 PCDH12Q9NPG4 1184 aa6.26□□□□□ -1.41
CTNNA1-212ENST00000518919 ZMYM5Q9UJ78 669 aa6.26□□□□□ -1.41
CTNNA1-212ENST00000518919 TACC3Q9Y6A5 838 aa6.26□□□□□ -1.41
CTNNA1-212ENST00000518919 PTCH2Q9Y6C5 1203 aa6.26□□□□□ -1.41
CTNNA1-212ENST00000518919 NSD3Q9BZ95 1437 aa6.25□□□□□ -1.41
CTNNA1-212ENST00000518919 RIMS2Q9UQ26 1411 aa6.25□□□□□ -1.41
CTNNA1-212ENST00000518919 ALKQ9UM73 1620 aa6.25□□□□□ -1.41
CTNNA1-212ENST00000518919 NRXN3Q9Y4C0 1643 aa6.25□□□□□ -1.41
CTNNA1-212ENST00000518919 FAM86C2PA6NEL3 165 aa6.25□□□□□ -1.41
CTNNA1-212ENST00000518919 PGRP06401 933 aa6.25□□□□□ -1.41
CTNNA1-212ENST00000518919 CTSBP07858 339 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms